RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C GYP6P32806 458 aa8.82□□□□□ -1
SRP54YPR088C TBS1P38114 1094 aa8.82□□□□□ -1
SRP54YPR088C CCT4P39078 528 aaKnown RBP8.82□□□□□ -1
SRP54YPR088C GEM1P39722 662 aa8.82□□□□□ -1
SRP54YPR088C ESL1P40456 1118 aa8.82□□□□□ -1
SRP54YPR088C YJR054WP47114 497 aa8.82□□□□□ -1
SRP54YPR088C STB4P50104 949 aa8.82□□□□□ -1
SRP54YPR088C MND1P53102 219 aa8.82□□□□□ -1
SRP54YPR088C YGR035CP53222 116 aa8.82□□□□□ -1
SRP54YPR088C SPO21Q12411 609 aa8.82□□□□□ -1
SRP54YPR088C ADE3P07245 946 aaKnown RBP8.81□□□□□ -1
SRP54YPR088C EST1P17214 699 aaPredicted RBP8.81□□□□□ -1
SRP54YPR088C RPO26P20435 155 aa8.81□□□□□ -1
SRP54YPR088C CSE2P33308 149 aa8.81□□□□□ -1
SRP54YPR088C HEL1P36113 551 aa8.81□□□□□ -1
SRP54YPR088C BRL1P38770 471 aa8.81□□□□□ -1
SRP54YPR088C ASG1P40467 964 aa8.81□□□□□ -1
SRP54YPR088C SPO74P45819 413 aa8.81□□□□□ -1
SRP54YPR088C RPC17P47076 161 aa8.81□□□□□ -1
SRP54YPR088C YNL115CP53925 644 aa8.81□□□□□ -1
SRP54YPR088C EEB1Q02891 456 aa8.81□□□□□ -1
SRP54YPR088C MZM1Q03429 123 aaPredicted RBP8.81□□□□□ -1
SRP54YPR088C TIF35Q04067 274 aaKnown RBP8.81□□□□□ -1
SRP54YPR088C VTI1Q04338 217 aa8.81□□□□□ -1
SRP54YPR088C ECI1Q05871 280 aa8.81□□□□□ -1
SRP54YPR088C VBA3P25594 458 aa8.8□□□□□ -1
SRP54YPR088C BIO2P32451 375 aa8.8□□□□□ -1
SRP54YPR088C GCG1P32656 232 aaKnown RBP8.8□□□□□ -1
SRP54YPR088C ABD1P32783 436 aaPredicted RBP8.8□□□□□ -1
SRP54YPR088C KDX1P36005 433 aa8.8□□□□□ -1
SRP54YPR088C VBA5P36172 582 aa8.8□□□□□ -1
SRP54YPR088C AGP2P38090 596 aa8.8□□□□□ -1
SRP54YPR088C POA1P38218 177 aa8.8□□□□□ -1
SRP54YPR088C CBR1P38626 284 aaKnown RBP8.8□□□□□ -1
SRP54YPR088C PMC1P38929 1173 aaPredicted RBP8.8□□□□□ -1
SRP54YPR088C URH1Q04179 340 aa8.8□□□□□ -1
SRP54YPR088C MAG2Q06436 670 aaKnown RBP8.8□□□□□ -1
SRP54YPR088C TRE1Q08919 783 aa8.8□□□□□ -1
SRP54YPR088C RMP1Q12530 201 aa8.8□□□□□ -1
SRP54YPR088C JIP3O13555 125 aa8.8□□□□□ -1
SRP54YPR088C VPS3P23643 1011 aa8.8□□□□□ -1
SRP54YPR088C MRP4P32902 394 aa8.8□□□□□ -1
SRP54YPR088C YBL055CP34220 418 aaPredicted RBP8.8□□□□□ -1
SRP54YPR088C QNS1P38795 714 aaKnown RBP8.8□□□□□ -1
SRP54YPR088C DSE1P40077 573 aa8.8□□□□□ -1
SRP54YPR088C YFL040WP43562 540 aa8.8□□□□□ -1
SRP54YPR088C GYL1Q04322 720 aa8.8□□□□□ -1
SRP54YPR088C GRS1P38088 690 aaKnown RBP8.79□□□□□ -1
SRP54YPR088C SNZ3P43545 298 aa8.79□□□□□ -1
SRP54YPR088C POL31P46957 487 aa8.79□□□□□ -1
SRP54YPR088C SNZ2P53824 298 aa8.79□□□□□ -1
SRP54YPR088C STP1Q00947 519 aa8.79□□□□□ -1
SRP54YPR088C RCR2Q03446 210 aaKnown RBP8.79□□□□□ -1
SRP54YPR088C SXM1Q04175 944 aaKnown RBP8.79□□□□□ -1
SRP54YPR088C YDR278CQ05612 105 aa8.79□□□□□ -1
SRP54YPR088C NOP6Q07623 225 aaKnown RBP8.79□□□□□ -1
SRP54YPR088C SDH5Q08230 162 aa8.79□□□□□ -1
SRP54YPR088C YOR059CQ08448 450 aaKnown RBP8.79□□□□□ -1
SRP54YPR088C AIM41Q12032 185 aa8.79□□□□□ -1
SRP54YPR088C NUR1Q12066 484 aa8.79□□□□□ -1
SRP54YPR088C SAT4P25333 603 aaKnown RBP8.78□□□□□ -1
SRP54YPR088C FRE1P32791 686 aa8.78□□□□□ -1
SRP54YPR088C YBL036CP38197 257 aa8.78□□□□□ -1
SRP54YPR088C SLX1P38324 304 aa8.78□□□□□ -1
SRP54YPR088C TMN3P40071 706 aa8.78□□□□□ -1
SRP54YPR088C ARO80Q04052 950 aa8.78□□□□□ -1
SRP54YPR088C ESC8Q08119 714 aa8.78□□□□□ -1
SRP54YPR088C REC8Q12188 680 aa8.78□□□□□ -1
SRP54YPR088C CDC8P00572 216 aa8.77□□□□□ -1.01
SRP54YPR088C PDR1P12383 1068 aa8.77□□□□□ -1.01
SRP54YPR088C KAR3P17119 729 aa8.77□□□□□ -1.01
SRP54YPR088C GAC1P28006 793 aa8.77□□□□□ -1.01
SRP54YPR088C CAP1P28495 268 aaKnown RBP8.77□□□□□ -1.01
SRP54YPR088C LTV1P34078 463 aa8.77□□□□□ -1.01
SRP54YPR088C SEG2P34250 1132 aa8.77□□□□□ -1.01
SRP54YPR088C MRPL7P36519 292 aa8.77□□□□□ -1.01
SRP54YPR088C PAM1P37304 830 aaKnown RBP8.77□□□□□ -1.01
SRP54YPR088C SHE3P38272 425 aaKnown RBP8.77□□□□□ -1.01
SRP54YPR088C SAK1P38990 1142 aa8.77□□□□□ -1.01
SRP54YPR088C FOL2P51601 243 aaKnown RBP8.77□□□□□ -1.01
SRP54YPR088C MTG1Q03151 367 aaPredicted RBP8.77□□□□□ -1.01
SRP54YPR088C MUB1Q03162 620 aa8.77□□□□□ -1.01
SRP54YPR088C YMR187CQ03236 431 aa8.77□□□□□ -1.01
SRP54YPR088C IVY1Q04934 453 aa8.77□□□□□ -1.01
SRP54YPR088C APL5Q08951 932 aaKnown RBP8.77□□□□□ -1.01
SRP54YPR088C GAL80P04387 435 aa8.76□□□□□ -1.01
SRP54YPR088C TPK1P06244 397 aa8.76□□□□□ -1.01
SRP54YPR088C PMS1P14242 873 aa8.76□□□□□ -1.01
SRP54YPR088C PUT4P15380 627 aa8.76□□□□□ -1.01
SRP54YPR088C NFU1P32860 256 aa8.76□□□□□ -1.01
SRP54YPR088C OLA1P38219 394 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C PCM1P38628 557 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C MMS21P38632 267 aa8.76□□□□□ -1.01
SRP54YPR088C END3P39013 349 aa8.76□□□□□ -1.01
SRP54YPR088C RIM8P53179 542 aa8.76□□□□□ -1.01
SRP54YPR088C SKY1Q03656 742 aa8.76□□□□□ -1.01
SRP54YPR088C UFO1Q04511 668 aa8.76□□□□□ -1.01
SRP54YPR088C TDA9Q04545 1251 aa8.76□□□□□ -1.01
SRP54YPR088C VPS54Q12071 889 aa8.76□□□□□ -1.01
SRP54YPR088C PKH2Q12236 1081 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms