RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCL1	YPR025C	FRE5	Q08908	694 aa		4.9	□□□□□ -1.63
CCL1	YPR025C	RPS21B	Q3E754	87 aa	Known RBP	4.9	□□□□□ -1.63
CCL1	YPR025C	ALG7	P07286	448 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	PYC1	P11154	1178 aa	Known RBP	4.89	□□□□□ -1.63
CCL1	YPR025C	ERG6	P25087	383 aa	Known RBP	4.89	□□□□□ -1.63
CCL1	YPR025C	SEC65	P29478	273 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	EUG1	P32474	517 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	DID4	P36108	232 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	YBR053C	P38235	358 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	HXT6	P39003	570 aa	Known RBP	4.89	□□□□□ -1.63
CCL1	YPR025C	HXT7	P39004	570 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	YNL195C	P40168	261 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	GID8	P40208	455 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	CTK1	Q03957	528 aa	Known RBP	4.89	□□□□□ -1.63
CCL1	YPR025C	ATG11	Q12527	1178 aa		4.89	□□□□□ -1.63
CCL1	YPR025C	RPS21A	P0C0V8	87 aa	Known RBP	4.88	□□□□□ -1.63
CCL1	YPR025C	DAL3	P32459	195 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	BEM4	P39011	633 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	YJR120W	P47157	116 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	MTL1	P53214	551 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	FOL1	P53848	824 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	YMR210W	Q03649	449 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	YLR407W	Q06070	228 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	YOL073C	Q08232	322 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	VHS3	Q08438	674 aa		4.88	□□□□□ -1.63
CCL1	YPR025C	HRP1	Q99383	534 aa	Known RBP	4.88	□□□□□ -1.63
CCL1	YPR025C	RNR1	P21524	888 aa	Known RBP	4.87	□□□□□ -1.63
CCL1	YPR025C	HIS7	P33734	552 aa	Known RBP	4.87	□□□□□ -1.63
CCL1	YPR025C	CHS7	P38843	316 aa		4.87	□□□□□ -1.63
CCL1	YPR025C	HOS4	P40480	1083 aa		4.87	□□□□□ -1.63
CCL1	YPR025C	YJL163C	P46996	555 aa		4.87	□□□□□ -1.63
CCL1	YPR025C	PTA1	Q01329	785 aa	Predicted RBP	4.87	□□□□□ -1.63
CCL1	YPR025C	ADY4	Q05955	493 aa		4.87	□□□□□ -1.63
CCL1	YPR025C	SGO1	Q08490	590 aa		4.87	□□□□□ -1.63
CCL1	YPR025C	IRC13	Q08630	104 aa		4.87	□□□□□ -1.63
CCL1	YPR025C	PPR1	P07272	904 aa	Predicted RBP	4.86	□□□□□ -1.63
CCL1	YPR025C	IMG2	P25642	146 aa	Predicted RBP	4.86	□□□□□ -1.63
CCL1	YPR025C	PPS1	P38148	807 aa		4.86	□□□□□ -1.63
CCL1	YPR025C	LYS9	P38999	446 aa		4.86	□□□□□ -1.63
CCL1	YPR025C	BAP3	P41815	604 aa		4.86	□□□□□ -1.63
CCL1	YPR025C	DUG1	P43616	481 aa	Known RBP	4.86	□□□□□ -1.63
CCL1	YPR025C	TRE2	Q08693	809 aa		4.86	□□□□□ -1.63
CCL1	YPR025C	HFI1	Q12060	488 aa		4.86	□□□□□ -1.63
CCL1	YPR025C	YKU70	P32807	602 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	TOM20	P35180	183 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	OAF3	P36023	863 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	FAT1	P38225	669 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	YBR071W	P38243	211 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	GET2	P40056	285 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	NOP9	P47077	666 aa	Known RBP	4.85	□□□□□ -1.63
CCL1	YPR025C	UBC11	P52492	156 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	YMR206W	Q03695	313 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	HMO1	Q03973	246 aa	Known RBP	4.85	□□□□□ -1.63
CCL1	YPR025C	DIA2	Q08496	732 aa	Predicted RBP	4.85	□□□□□ -1.63
CCL1	YPR025C	ECM3	Q99252	613 aa		4.85	□□□□□ -1.63
CCL1	YPR025C	SWI6	P09959	803 aa		4.84	□□□□□ -1.63
CCL1	YPR025C	MVD1	P32377	396 aa	Known RBP	4.84	□□□□□ -1.63
CCL1	YPR025C	PAF1	P38351	445 aa		4.84	□□□□□ -1.63
CCL1	YPR025C	BCD1	P38772	366 aa		4.84	□□□□□ -1.63
CCL1	YPR025C	GPP2	P40106	250 aa	Known RBP	4.84	□□□□□ -1.63
CCL1	YPR025C	YPS7	Q06325	596 aa		4.84	□□□□□ -1.63
CCL1	YPR025C	VPS36	Q06696	566 aa		4.84	□□□□□ -1.63
CCL1	YPR025C	RMP1	Q12530	201 aa		4.84	□□□□□ -1.63
CCL1	YPR025C	GLN4	P13188	809 aa	Known RBP	4.83	□□□□□ -1.64
CCL1	YPR025C	FRS1	P15624	595 aa	Known RBP	4.83	□□□□□ -1.64
CCL1	YPR025C	AEP2	P22136	580 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	PEX1	P24004	1043 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	PET127	P32606	800 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	FMO1	P38866	432 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	REV7	P38927	245 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	DUN1	P39009	513 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	CCT3	P39077	534 aa	Known RBP	4.83	□□□□□ -1.64
CCL1	YPR025C	NUP60	P39705	539 aa		4.83	□□□□□ -1.64
CCL1	YPR025C	RSC8	P43609	557 aa	Known RBP	4.83	□□□□□ -1.64
CCL1	YPR025C	NOP15	P53927	220 aa	Predicted RBP	4.83	□□□□□ -1.64
CCL1	YPR025C	RPS17A	P02407	136 aa	Known RBP	4.82	□□□□□ -1.64
CCL1	YPR025C	RPS17B	P14127	136 aa	Known RBP	4.82	□□□□□ -1.64
CCL1	YPR025C	MRC1	P25588	1096 aa		4.82	□□□□□ -1.64
CCL1	YPR025C	HIR1	P32479	840 aa		4.82	□□□□□ -1.64
CCL1	YPR025C	SFB3	P38810	929 aa		4.82	□□□□□ -1.64
CCL1	YPR025C	RGC1	Q06108	1083 aa	Known RBP	4.82	□□□□□ -1.64
CCL1	YPR025C	APM4	Q99186	491 aa		4.82	□□□□□ -1.64
CCL1	YPR025C	ERG20	P08524	352 aa	Known RBP	4.81	□□□□□ -1.64
CCL1	YPR025C	FMP52	P40008	231 aa		4.81	□□□□□ -1.64
CCL1	YPR025C	SNM1	P40993	198 aa		4.81	□□□□□ -1.64
CCL1	YPR025C	NIT2	P47016	307 aa		4.81	□□□□□ -1.64
CCL1	YPR025C	COG6	P53959	839 aa		4.81	□□□□□ -1.64
CCL1	YPR025C	SKY1	Q03656	742 aa		4.81	□□□□□ -1.64
CCL1	YPR025C	VBA4	Q04602	768 aa	Known RBP	4.81	□□□□□ -1.64
CCL1	YPR025C	YPR027C	Q12079	277 aa		4.81	□□□□□ -1.64
CCL1	YPR025C	SEC15	P22224	910 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	SER1	P33330	395 aa	Known RBP	4.8	□□□□□ -1.64
CCL1	YPR025C	ENP1	P38333	483 aa	Known RBP	4.8	□□□□□ -1.64
CCL1	YPR025C	BIT2	P38346	545 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	VID28	P40547	921 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	PXA1	P41909	870 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	BIT61	P47041	543 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	PAN2	P53010	1115 aa	Predicted RBP	4.8	□□□□□ -1.64
CCL1	YPR025C	PEX14	P53112	341 aa		4.8	□□□□□ -1.64
CCL1	YPR025C	SPC105	P53148	917 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms