RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	DID4	P36108	232 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	SIC1	P38634	284 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	TDA3	P38758	523 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	MIP6	P38760	659 aa	Known RBP	3.9	□□□□□ -1.79
VAM10	YOR068C	PEA2	P40091	420 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	YGR153W	P48238	217 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	ERG5	P54781	538 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	CFT2	Q12102	859 aa	Predicted RBP	3.9	□□□□□ -1.79
VAM10	YOR068C	DCS2	Q12123	353 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	RMP1	Q12530	201 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	YLR415C	O13578	112 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	CAD1	P24813	409 aa	Known RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	CTS1	P29029	562 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	TFC4	P33339	1025 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	SAS3	P34218	831 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	CTF13	P35203	478 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	OAF1	P39720	1047 aa	Predicted RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	UBP5	P39944	805 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	RET2	P43621	546 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	MNN11	P46985	422 aa	Known RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	BUL1	P48524	976 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	MNN10	P50108	393 aa	Known RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	BRE5	P53741	515 aa	Known RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	LEE1	Q02799	301 aa	Known RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	RCF1	Q03713	159 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	YSH1	Q06224	779 aa	Predicted RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	ENB1	Q08299	606 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	YOR378W	Q08902	515 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	SNU66	Q12420	587 aa	Predicted RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	TRM11	Q12463	433 aa		3.89	□□□□□ -1.79
VAM10	YOR068C	NOP58	Q12499	511 aa	Known RBP	3.89	□□□□□ -1.79
VAM10	YOR068C	TY1B-A	O13527	1196 aa	Known RBP	3.88	□□□□□ -1.79
VAM10	YOR068C	DCG1	P32460	244 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	NFU1	P32860	256 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	TRZ1	P36159	838 aa	Predicted RBP	3.88	□□□□□ -1.79
VAM10	YOR068C	JNM1	P36224	373 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	RIM4	P38741	713 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	RPP1	P38786	293 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	SSZ1	P38788	538 aa	Known RBP	3.88	□□□□□ -1.79
VAM10	YOR068C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
VAM10	YOR068C	EMP65	P40085	556 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	FAF1	P40546	346 aa	Predicted RBP	3.88	□□□□□ -1.79
VAM10	YOR068C	DJP1	P40564	432 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	TAF1	P46677	1066 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	SPC105	P53148	917 aa		3.88	□□□□□ -1.79
VAM10	YOR068C	CYB2	P00175	591 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	SST2	P11972	698 aa	Known RBP	3.87	□□□□□ -1.79
VAM10	YOR068C	MSM1	P22438	575 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	PLC1	P32383	869 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	YKL133C	P36066	463 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	FUI1	P38196	639 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	NPR3	P38742	1146 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	CCT5	P40413	562 aa	Known RBP	3.87	□□□□□ -1.79
VAM10	YOR068C	YJR039W	P47107	1121 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	SLD3	P53135	668 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	PAP2	P53632	584 aa	Known RBP	3.87	□□□□□ -1.79
VAM10	YOR068C	ORC4	P54791	529 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	PTA1	Q01329	785 aa	Predicted RBP	3.87	□□□□□ -1.79
VAM10	YOR068C	CTF4	Q01454	927 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	ECM9	Q02202	377 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	ATG16	Q03818	150 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	MPD2	Q99316	277 aa		3.87	□□□□□ -1.79
VAM10	YOR068C	PMA1	P05030	918 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	PET111	P08468	800 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	PFK1	P16861	987 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	ADE2	P21264	571 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	BRF1	P29056	596 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	NGG1	P32494	702 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	NIC96	P34077	839 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	PTH2	P34222	208 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	RIX1	P38883	763 aa	Predicted RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	HXT6	P39003	570 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	HXT7	P39004	570 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	IRC24	P40580	263 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	PRP31	P49704	494 aa	Predicted RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	PHO23	P50947	330 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	PIL1	P53252	339 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	NRG1	Q03125	231 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	PRP3	Q03338	469 aa	Predicted RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	HEL2	Q05580	639 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	ESC8	Q08119	714 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	TGL5	Q12043	749 aa		3.86	□□□□□ -1.79
VAM10	YOR068C	SGT2	Q12118	346 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	RPS21B	Q3E754	87 aa	Known RBP	3.86	□□□□□ -1.79
VAM10	YOR068C	INH1	P01097	85 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	TRP4	P07285	380 aa	Predicted RBP	3.85	□□□□□ -1.79
VAM10	YOR068C	RPS21A	P0C0V8	87 aa	Known RBP	3.85	□□□□□ -1.79
VAM10	YOR068C	PTP2	P29461	750 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	DAL3	P32459	195 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	YKR075C	P36155	307 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	SHM2	P37291	469 aa	Known RBP	3.85	□□□□□ -1.79
VAM10	YOR068C	YBR259W	P38338	688 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	BIT2	P38346	545 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	BEM4	P39011	633 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	GID8	P40208	455 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	FKH2	P41813	862 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	GPI8	P49018	411 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	YBP2	P53169	641 aa		3.85	□□□□□ -1.79
VAM10	YOR068C	GPD1	Q00055	391 aa	Known RBP	3.85	□□□□□ -1.79
VAM10	YOR068C	SXM1	Q04175	944 aa	Known RBP	3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms