RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C NPP1P25353 742 aa9.88□□□□□ -0.83
SPT20YOL148C CAP1P28495 268 aaKnown RBP9.88□□□□□ -0.83
SPT20YOL148C MGM1P32266 881 aa9.88□□□□□ -0.83
SPT20YOL148C LAM5P43560 674 aa9.88□□□□□ -0.83
SPT20YOL148C YGL108CP53139 140 aa9.88□□□□□ -0.83
SPT20YOL148C GUP1P53154 560 aa9.88□□□□□ -0.83
SPT20YOL148C TFB3Q03290 321 aa9.88□□□□□ -0.83
SPT20YOL148C YML082WQ04533 649 aaKnown RBP9.88□□□□□ -0.83
SPT20YOL148C GGA1Q06336 557 aa9.88□□□□□ -0.83
SPT20YOL148C GPR1Q12361 961 aa9.88□□□□□ -0.83
SPT20YOL148C RIM15P43565 1770 aa9.88□□□□□ -0.83
SPT20YOL148C CMD1P06787 147 aaKnown RBP9.87□□□□□ -0.83
SPT20YOL148C SWI6P09959 803 aa9.87□□□□□ -0.83
SPT20YOL148C ATR1P13090 542 aa9.87□□□□□ -0.83
SPT20YOL148C REB1P21538 810 aa9.87□□□□□ -0.83
SPT20YOL148C AAD3P25612 363 aa9.87□□□□□ -0.83
SPT20YOL148C TRK2P28584 889 aa9.87□□□□□ -0.83
SPT20YOL148C MRF1P30775 413 aaPredicted RBP9.87□□□□□ -0.83
SPT20YOL148C SEC21P32074 935 aaKnown RBP9.87□□□□□ -0.83
SPT20YOL148C CUE2P36075 443 aaKnown RBP9.87□□□□□ -0.83
SPT20YOL148C UBP13P38187 747 aa9.87□□□□□ -0.83
SPT20YOL148C POP4P38336 279 aa9.87□□□□□ -0.83
SPT20YOL148C PEX18P38855 283 aa9.87□□□□□ -0.83
SPT20YOL148C YMR134WP40207 237 aa9.87□□□□□ -0.83
SPT20YOL148C PFK26P40433 827 aaKnown RBP9.87□□□□□ -0.83
SPT20YOL148C PRK1P40494 810 aa9.87□□□□□ -0.83
SPT20YOL148C YGL176CP46945 554 aa9.87□□□□□ -0.83
SPT20YOL148C NBP1P52919 319 aaPredicted RBP9.87□□□□□ -0.83
SPT20YOL148C LSG1P53145 640 aaKnown RBP9.87□□□□□ -0.83
SPT20YOL148C YDR476CQ03362 224 aa9.87□□□□□ -0.83
SPT20YOL148C YDR278CQ05612 105 aa9.87□□□□□ -0.83
SPT20YOL148C PUF3Q07807 879 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
SPT20YOL148C GCN3P14741 305 aa9.86□□□□□ -0.83
SPT20YOL148C DBF4P32325 704 aa9.86□□□□□ -0.83
SPT20YOL148C DGR2P32330 852 aa9.86□□□□□ -0.83
SPT20YOL148C PET112P33893 541 aa9.86□□□□□ -0.83
SPT20YOL148C PTK1P36002 662 aaPredicted RBP9.86□□□□□ -0.83
SPT20YOL148C SPC42P36094 363 aa9.86□□□□□ -0.83
SPT20YOL148C SLM4P38247 162 aa9.86□□□□□ -0.83
SPT20YOL148C ULP1Q02724 621 aa9.86□□□□□ -0.83
SPT20YOL148C NOP12Q08208 459 aaKnown RBP9.86□□□□□ -0.83
SPT20YOL148C OXR1Q08952 273 aa9.86□□□□□ -0.83
SPT20YOL148C SCP160P06105 1222 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
SPT20YOL148C TSC10P38342 320 aa9.86□□□□□ -0.83
SPT20YOL148C DIA4P38705 446 aaPredicted RBP9.86□□□□□ -0.83
SPT20YOL148C FRT2P39734 528 aa9.86□□□□□ -0.83
SPT20YOL148C ALA1P40825 983 aaKnown RBP9.86□□□□□ -0.83
SPT20YOL148C KTR5P53966 522 aaPredicted RBP9.86□□□□□ -0.83
SPT20YOL148C FMP30Q02883 468 aa9.86□□□□□ -0.83
SPT20YOL148C ATG16Q03818 150 aa9.86□□□□□ -0.83
SPT20YOL148C VAM6Q07468 1049 aa9.86□□□□□ -0.83
SPT20YOL148C RPN8Q08723 338 aaKnown RBP9.86□□□□□ -0.83
SPT20YOL148C YPL260WQ08977 551 aa9.86□□□□□ -0.83
SPT20YOL148C YLR053CQ12026 108 aa9.86□□□□□ -0.83
SPT20YOL148C DBP10Q12389 995 aaKnown RBP9.86□□□□□ -0.83
SPT20YOL148C RPS5P26783 225 aaKnown RBP9.85□□□□□ -0.83
SPT20YOL148C PRP40P33203 583 aaKnown RBP9.85□□□□□ -0.83
SPT20YOL148C NUP82P40368 713 aa9.85□□□□□ -0.83
SPT20YOL148C ROG3P43602 733 aa9.85□□□□□ -0.83
SPT20YOL148C SEN54Q02825 467 aaPredicted RBP9.85□□□□□ -0.83
SPT20YOL148C SNX3Q08826 162 aaKnown RBP9.85□□□□□ -0.83
SPT20YOL148C RRT12P25381 491 aa9.84□□□□□ -0.83
SPT20YOL148C KAR4P25583 335 aa9.84□□□□□ -0.83
SPT20YOL148C MDL2P33311 773 aa9.84□□□□□ -0.83
SPT20YOL148C NCL1P38205 684 aaKnown RBP9.84□□□□□ -0.83
SPT20YOL148C EXO5P38289 585 aa9.84□□□□□ -0.83
SPT20YOL148C ORC6P38826 435 aa9.84□□□□□ -0.83
SPT20YOL148C STL1P39932 569 aa9.84□□□□□ -0.83
SPT20YOL148C MET18P40469 1032 aa9.84□□□□□ -0.83
SPT20YOL148C MAM33P40513 266 aa9.84□□□□□ -0.83
SPT20YOL148C ESF2P53743 316 aaKnown RBP9.84□□□□□ -0.83
SPT20YOL148C ATG26Q06321 1198 aa9.84□□□□□ -0.83
SPT20YOL148C SCM3Q12334 223 aa9.84□□□□□ -0.83
SPT20YOL148C MYO1P08964 1928 aa9.84□□□□□ -0.83
SPT20YOL148C PDC5P16467 563 aaKnown RBP9.84□□□□□ -0.83
SPT20YOL148C TPS2P31688 896 aaKnown RBP9.84□□□□□ -0.83
SPT20YOL148C TPO5P36029 618 aa9.84□□□□□ -0.83
SPT20YOL148C TGL4P36165 910 aa9.84□□□□□ -0.83
SPT20YOL148C NPT1P39683 429 aaKnown RBP9.84□□□□□ -0.83
SPT20YOL148C FIG4P42837 879 aa9.84□□□□□ -0.83
SPT20YOL148C PIP2P52960 996 aa9.84□□□□□ -0.83
SPT20YOL148C DIA2Q08496 732 aaPredicted RBP9.84□□□□□ -0.83
SPT20YOL148C YPR202WQ08993 238 aa9.84□□□□□ -0.83
SPT20YOL148C RRD2Q12461 358 aa9.84□□□□□ -0.83
SPT20YOL148C ATG11Q12527 1178 aa9.84□□□□□ -0.83
SPT20YOL148C PFK1P16861 987 aaKnown RBP9.83□□□□□ -0.84
SPT20YOL148C RGR1P19263 1082 aa9.83□□□□□ -0.84
SPT20YOL148C SNT1P25357 1226 aa9.83□□□□□ -0.84
SPT20YOL148C ICL1P28240 557 aaPredicted RBP9.83□□□□□ -0.84
SPT20YOL148C PAM1P37304 830 aaKnown RBP9.83□□□□□ -0.84
SPT20YOL148C SAH1P39954 449 aaKnown RBP9.83□□□□□ -0.84
SPT20YOL148C NMA2P53204 395 aa9.83□□□□□ -0.84
SPT20YOL148C BUL2Q03758 920 aaKnown RBP9.83□□□□□ -0.84
SPT20YOL148C YML108WQ03759 105 aa9.83□□□□□ -0.84
SPT20YOL148C FMP42Q04991 504 aa9.83□□□□□ -0.84
SPT20YOL148C DPH6Q12429 685 aa9.83□□□□□ -0.84
SPT20YOL148C SPE4Q12455 300 aa9.83□□□□□ -0.84
SPT20YOL148C THR1P17423 357 aaKnown RBP9.82□□□□□ -0.84
SPT20YOL148C RAD14P28519 371 aa9.82□□□□□ -0.84
SPT20YOL148C MCM5P29496 775 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms