RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC5	YMR001C	TMA7	Q3E764	64 aa	Known RBP	4.28	□□□□□ -1.72
CDC5	YMR001C	MSS18	P08593	268 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	APA1	P16550	321 aa	Known RBP	4.28	□□□□□ -1.72
CDC5	YMR001C	DCG1	P32460	244 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	APL2	P36000	726 aa	Predicted RBP	4.28	□□□□□ -1.72
CDC5	YMR001C	CDS1	P38221	457 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	YBR053C	P38235	358 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	PZF1	P39933	429 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	HOS4	P40480	1083 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	BAP3	P41815	604 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	PRP31	P49704	494 aa	Predicted RBP	4.28	□□□□□ -1.72
CDC5	YMR001C	SPT20	P50875	604 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	VPS36	Q06696	566 aa		4.28	□□□□□ -1.72
CDC5	YMR001C	ELM1	P32801	640 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	TOD6	P34219	525 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	BUD8	P41698	603 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	PUS4	P48567	403 aa	Known RBP	4.27	□□□□□ -1.73
CDC5	YMR001C	PHM6	Q05637	104 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	TRM11	Q12463	433 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	RPT2	P40327	437 aa	Known RBP	4.27	□□□□□ -1.73
CDC5	YMR001C	NOP9	P47077	666 aa	Known RBP	4.27	□□□□□ -1.73
CDC5	YMR001C	YDL183C	P48569	320 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	PIP2	P52960	996 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	RIM8	P53179	542 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	MOT3	P54785	490 aa	Known RBP	4.27	□□□□□ -1.73
CDC5	YMR001C	OMS1	Q06668	471 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	YPR027C	Q12079	277 aa		4.27	□□□□□ -1.73
CDC5	YMR001C	RNR1	P21524	888 aa	Known RBP	4.26	□□□□□ -1.73
CDC5	YMR001C	FUI1	P38196	639 aa		4.26	□□□□□ -1.73
CDC5	YMR001C	ECM1	P39715	212 aa		4.26	□□□□□ -1.73
CDC5	YMR001C	ORC4	P54791	529 aa		4.26	□□□□□ -1.73
CDC5	YMR001C	TMA10	Q06177	86 aa		4.26	□□□□□ -1.73
CDC5	YMR001C	RTK1	Q12100	620 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC5	YMR001C	SWM1	Q12379	170 aa		4.26	□□□□□ -1.73
CDC5	YMR001C	TRP4	P07285	380 aa	Predicted RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CDC5	YMR001C	MAD2	P40958	196 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	MTL1	P53214	551 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	SVL3	Q03088	825 aa	Known RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	PKH1	Q03407	766 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	CIA1	Q05583	330 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	MCM21	Q06675	368 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	NGL1	Q08213	363 aa	Known RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	PEX15	Q08215	383 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	RPS17A	P02407	136 aa	Known RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	RPS17B	P14127	136 aa	Known RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	KCC4	P25389	1037 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	MSS1	P32559	526 aa	Predicted RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	BRE1	Q07457	700 aa	Known RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	ISA1	Q07821	250 aa	Predicted RBP	4.25	□□□□□ -1.73
CDC5	YMR001C	ENB1	Q08299	606 aa		4.25	□□□□□ -1.73
CDC5	YMR001C	PYC1	P11154	1178 aa	Known RBP	4.24	□□□□□ -1.73
CDC5	YMR001C	PRE4	P30657	266 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	YBR259W	P38338	688 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	PHO23	P50947	330 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	PTA1	Q01329	785 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC5	YMR001C	DIN7	Q12086	430 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	FRS1	P15624	595 aa	Known RBP	4.24	□□□□□ -1.73
CDC5	YMR001C	HOP1	P20050	605 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	STE11	P23561	717 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	NIC96	P34077	839 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	MAC1	P35192	417 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CDC5	YMR001C	BIT61	P47041	543 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	CNM67	P53865	581 aa	Known RBP	4.24	□□□□□ -1.73
CDC5	YMR001C	THI22	Q06490	572 aa		4.24	□□□□□ -1.73
CDC5	YMR001C	PMA1	P05030	918 aa	Known RBP	4.23	□□□□□ -1.73
CDC5	YMR001C	PET127	P32606	800 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	APN2	P38207	520 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	YHL041W	P38730	149 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	FMO1	P38866	432 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	SLD3	P53135	668 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	SPC105	P53148	917 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	MTD1	Q02046	320 aa	Known RBP	4.23	□□□□□ -1.73
CDC5	YMR001C	ECM3	Q99252	613 aa		4.23	□□□□□ -1.73
CDC5	YMR001C	KTR4	P38131	464 aa		4.22	□□□□□ -1.73
CDC5	YMR001C	UBS1	P38290	277 aa		4.22	□□□□□ -1.73
CDC5	YMR001C	SRP68	P38687	599 aa	Known RBP	4.22	□□□□□ -1.73
CDC5	YMR001C	QRI7	P43122	407 aa		4.22	□□□□□ -1.73
CDC5	YMR001C	CWC2	Q12046	339 aa	Predicted RBP	4.22	□□□□□ -1.73
CDC5	YMR001C	VPS24	P36095	224 aa	Known RBP	4.22	□□□□□ -1.73
CDC5	YMR001C	CRG1	P38892	291 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
CDC5	YMR001C	FKH2	P41813	862 aa		4.22	□□□□□ -1.73
CDC5	YMR001C	MNT2	P53059	558 aa		4.22	□□□□□ -1.73
CDC5	YMR001C	RPP2A	P05319	106 aa	Known RBP	4.21	□□□□□ -1.74
CDC5	YMR001C	TAF1	P46677	1066 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	AVT1	P47082	602 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	PRP43	P53131	767 aa	Known RBP	4.21	□□□□□ -1.74
CDC5	YMR001C	GPD1	Q00055	391 aa	Known RBP	4.21	□□□□□ -1.74
CDC5	YMR001C	REC102	Q02721	264 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	YMR210W	Q03649	449 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	CLU1	Q03690	1277 aa	Known RBP	4.21	□□□□□ -1.74
CDC5	YMR001C	YEL076C-A	P0CX16	216 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	YLR464W	P0CX17	216 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	SWE1	P32944	819 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	YEL076C	P39971	216 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	NOP2	P40991	618 aa	Known RBP	4.21	□□□□□ -1.74
CDC5	YMR001C	VHS3	Q08438	674 aa		4.21	□□□□□ -1.74
CDC5	YMR001C	KAR1	P11927	433 aa		4.2	□□□□□ -1.74
CDC5	YMR001C	LAT1	P12695	482 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms