RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C PSY2P40164 858 aa11.07□□□□□ -0.64
SHM2YLR058C KAP114P53067 1004 aa11.07□□□□□ -0.64
SHM2YLR058C MND1P53102 219 aa11.07□□□□□ -0.64
SHM2YLR058C DIG1Q03063 452 aaKnown RBP11.07□□□□□ -0.64
SHM2YLR058C SDH5Q08230 162 aa11.07□□□□□ -0.64
SHM2YLR058C BI3Q9ZZW7 517 aa11.07□□□□□ -0.64
SHM2YLR058C GAL80P04387 435 aa11.06□□□□□ -0.64
SHM2YLR058C TPK1P06244 397 aa11.06□□□□□ -0.64
SHM2YLR058C HAP2P06774 265 aa11.06□□□□□ -0.64
SHM2YLR058C VMA4P22203 233 aaKnown RBP11.06□□□□□ -0.64
SHM2YLR058C SAT4P25333 603 aaKnown RBP11.06□□□□□ -0.64
SHM2YLR058C CCL1P37366 393 aa11.06□□□□□ -0.64
SHM2YLR058C APN2P38207 520 aa11.06□□□□□ -0.64
SHM2YLR058C TDA3P38758 523 aa11.06□□□□□ -0.64
SHM2YLR058C SIP5P40210 489 aaKnown RBP11.06□□□□□ -0.64
SHM2YLR058C NDC80P40460 691 aa11.06□□□□□ -0.64
SHM2YLR058C JJJ1P53863 590 aa11.06□□□□□ -0.64
SHM2YLR058C SPP1Q03012 353 aa11.06□□□□□ -0.64
SHM2YLR058C MUB1Q03162 620 aa11.06□□□□□ -0.64
SHM2YLR058C UBR2Q07963 1872 aa11.06□□□□□ -0.64
SHM2YLR058C FRE1P32791 686 aa11.05□□□□□ -0.64
SHM2YLR058C KDX1P36005 433 aa11.05□□□□□ -0.64
SHM2YLR058C DSE1P40077 573 aa11.05□□□□□ -0.64
SHM2YLR058C TRE1Q08919 783 aa11.05□□□□□ -0.64
SHM2YLR058C GAC1P28006 793 aa11.04□□□□□ -0.64
SHM2YLR058C MRP4P32902 394 aa11.04□□□□□ -0.64
SHM2YLR058C HIS2P38635 335 aa11.04□□□□□ -0.64
SHM2YLR058C QNS1P38795 714 aaKnown RBP11.04□□□□□ -0.64
SHM2YLR058C SMF1P38925 575 aa11.04□□□□□ -0.64
SHM2YLR058C YEL023CP39992 682 aa11.04□□□□□ -0.64
SHM2YLR058C RSC8P43609 557 aaKnown RBP11.04□□□□□ -0.64
SHM2YLR058C ASG7P46993 209 aa11.04□□□□□ -0.64
SHM2YLR058C HOP2P53187 214 aa11.04□□□□□ -0.64
SHM2YLR058C GYL1Q04322 720 aa11.04□□□□□ -0.64
SHM2YLR058C YMR114CQ04471 368 aaKnown RBP11.04□□□□□ -0.64
SHM2YLR058C GFA1P14742 717 aaKnown RBP11.03□□□□□ -0.64
SHM2YLR058C EST1P17214 699 aaPredicted RBP11.03□□□□□ -0.64
SHM2YLR058C SLA2P33338 968 aa11.03□□□□□ -0.64
SHM2YLR058C RRT2P38332 387 aa11.03□□□□□ -0.64
SHM2YLR058C BRO1P48582 844 aa11.03□□□□□ -0.64
SHM2YLR058C PNG1Q02890 363 aa11.03□□□□□ -0.64
SHM2YLR058C EMI2Q04409 500 aaKnown RBP11.03□□□□□ -0.64
SHM2YLR058C YDR278CQ05612 105 aa11.03□□□□□ -0.64
SHM2YLR058C YOR059CQ08448 450 aaKnown RBP11.03□□□□□ -0.64
SHM2YLR058C JIP3O13555 125 aa11.02□□□□□ -0.64
SHM2YLR058C PET111P08468 800 aa11.02□□□□□ -0.64
SHM2YLR058C YBL036CP38197 257 aa11.02□□□□□ -0.64
SHM2YLR058C RFS1P38234 210 aaKnown RBP11.02□□□□□ -0.64
SHM2YLR058C SHE3P38272 425 aaKnown RBP11.02□□□□□ -0.64
SHM2YLR058C REI1P38344 393 aaPredicted RBP11.02□□□□□ -0.64
SHM2YLR058C RCK2P38623 610 aa11.02□□□□□ -0.64
SHM2YLR058C MSC7P38694 644 aa11.02□□□□□ -0.64
SHM2YLR058C SPC72P39723 622 aa11.02□□□□□ -0.64
SHM2YLR058C ASG1P40467 964 aa11.02□□□□□ -0.64
SHM2YLR058C ARO80Q04052 950 aa11.02□□□□□ -0.64
SHM2YLR058C ERV41Q04651 352 aa11.02□□□□□ -0.64
SHM2YLR058C VPS54Q12071 889 aa11.02□□□□□ -0.64
SHM2YLR058C PRC1P00729 532 aa11.01□□□□□ -0.65
SHM2YLR058C KAR3P17119 729 aa11.01□□□□□ -0.65
SHM2YLR058C SPT5P27692 1063 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C PAP1P29468 568 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C GCS1P35197 352 aa11.01□□□□□ -0.65
SHM2YLR058C HMT1P38074 348 aa11.01□□□□□ -0.65
SHM2YLR058C RPT2P40327 437 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C YFL052WP43551 465 aa11.01□□□□□ -0.65
SHM2YLR058C VPS60Q03390 229 aa11.01□□□□□ -0.65
SHM2YLR058C ATG16Q03818 150 aa11.01□□□□□ -0.65
SHM2YLR058C POB3Q04636 552 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C ADE3P07245 946 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C STE11P23561 717 aa11.01□□□□□ -0.65
SHM2YLR058C LRE1P25579 583 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C DBF4P32325 704 aa11.01□□□□□ -0.65
SHM2YLR058C PEX2P32800 271 aa11.01□□□□□ -0.65
SHM2YLR058C ABZ1P37254 787 aaPredicted RBP11.01□□□□□ -0.65
SHM2YLR058C YBR284WP38150 797 aa11.01□□□□□ -0.65
SHM2YLR058C SNZ3P43545 298 aa11.01□□□□□ -0.65
SHM2YLR058C SNZ2P53824 298 aa11.01□□□□□ -0.65
SHM2YLR058C YNL011CP53980 444 aa11.01□□□□□ -0.65
SHM2YLR058C SLG1P54867 378 aa11.01□□□□□ -0.65
SHM2YLR058C HOS3Q02959 697 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C DIS3Q08162 1001 aaKnown RBP11.01□□□□□ -0.65
SHM2YLR058C EMP46Q12396 444 aa11.01□□□□□ -0.65
SHM2YLR058C YLR422WQ06409 1932 aa11□□□□□ -0.65
SHM2YLR058C YLR462WO13556 202 aa11□□□□□ -0.65
SHM2YLR058C DPB3P27344 201 aa11□□□□□ -0.65
SHM2YLR058C ABD1P32783 436 aaPredicted RBP11□□□□□ -0.65
SHM2YLR058C YHL049CP38722 271 aa11□□□□□ -0.65
SHM2YLR058C TMN3P40071 706 aa11□□□□□ -0.65
SHM2YLR058C LCP5P40079 357 aaPredicted RBP11□□□□□ -0.65
SHM2YLR058C YER189WP40104 122 aa11□□□□□ -0.65
SHM2YLR058C YFL064CP43540 174 aa11□□□□□ -0.65
SHM2YLR058C NUT1P53114 1132 aa11□□□□□ -0.65
SHM2YLR058C CWC22P53333 577 aaKnown RBP11□□□□□ -0.65
SHM2YLR058C PUF3Q07807 879 aaKnown RBP RIP-Chip data11□□□□□ -0.65not detected
SHM2YLR058C MDM38Q08179 573 aa11□□□□□ -0.65
SHM2YLR058C YBL111CQ3E7Y5 667 aa11□□□□□ -0.65
SHM2YLR058C YEL043WP32618 956 aa10.99□□□□□ -0.65
SHM2YLR058C TKL2P33315 681 aa10.99□□□□□ -0.65
SHM2YLR058C CEP3P40969 608 aa10.99□□□□□ -0.65
SHM2YLR058C MCM6P53091 1017 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms