RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W MNN1P39106 762 aa1.38□□□□□ -2.19
PRP16YKR086W GYP8P43570 497 aa1.38□□□□□ -2.19
PRP16YKR086W LCD1Q04377 747 aa1.38□□□□□ -2.19
PRP16YKR086W TMN2Q04562 672 aa1.38□□□□□ -2.19
PRP16YKR086W MET7Q08645 548 aa1.38□□□□□ -2.19
PRP16YKR086W THI21Q08975 551 aa1.38□□□□□ -2.19
PRP16YKR086W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
PRP16YKR086W BNR1P40450 1375 aa1.37□□□□□ -2.19
PRP16YKR086W YEF3P16521 1044 aaKnown RBP1.37□□□□□ -2.19
PRP16YKR086W VBA3P25594 458 aa1.37□□□□□ -2.19
PRP16YKR086W EFT1P32324 842 aaKnown RBP1.37□□□□□ -2.19
PRP16YKR086W DAM1P53267 343 aa1.37□□□□□ -2.19
PRP16YKR086W NRG1Q03125 231 aa1.37□□□□□ -2.19
PRP16YKR086W HAL9Q12180 1030 aa1.37□□□□□ -2.19
PRP16YKR086W PFK1P16861 987 aaKnown RBP1.37□□□□□ -2.19
PRP16YKR086W HRR25P29295 494 aaKnown RBP1.37□□□□□ -2.19
PRP16YKR086W OAR1P35731 278 aa1.37□□□□□ -2.19
PRP16YKR086W PET10P36139 283 aa1.37□□□□□ -2.19
PRP16YKR086W HOS4P40480 1083 aa1.37□□□□□ -2.19
PRP16YKR086W IOC3P43596 787 aa1.37□□□□□ -2.19
PRP16YKR086W ATG36P46983 293 aa1.37□□□□□ -2.19
PRP16YKR086W SSY5P47002 699 aa1.37□□□□□ -2.19
PRP16YKR086W RTA1P53047 317 aa1.37□□□□□ -2.19
PRP16YKR086W TFB2Q02939 513 aa1.37□□□□□ -2.19
PRP16YKR086W YMR018WQ04364 514 aa1.37□□□□□ -2.19
PRP16YKR086W ASM4Q05166 528 aa1.37□□□□□ -2.19
PRP16YKR086W FPR4Q06205 392 aaPredicted RBP1.37□□□□□ -2.19
PRP16YKR086W STH1P32597 1359 aa1.37□□□□□ -2.19
PRP16YKR086W RIM15P43565 1770 aa1.37□□□□□ -2.19
PRP16YKR086W FIG2P25653 1609 aa1.36□□□□□ -2.19
PRP16YKR086W TYE7P33122 291 aaPredicted RBP1.36□□□□□ -2.19
PRP16YKR086W FLO10P36170 1169 aa1.36□□□□□ -2.19
PRP16YKR086W RTS3P53289 263 aa1.36□□□□□ -2.19
PRP16YKR086W AAT1Q01802 451 aa1.36□□□□□ -2.19
PRP16YKR086W YKR011CQ02209 353 aa1.36□□□□□ -2.19
PRP16YKR086W PEX19Q07418 342 aa1.36□□□□□ -2.19
PRP16YKR086W FAP7Q12055 197 aaPredicted RBP1.36□□□□□ -2.19
PRP16YKR086W YBR182C-AQ8TGU6 64 aa1.36□□□□□ -2.19
PRP16YKR086W YCL002CP25565 263 aa1.36□□□□□ -2.19
PRP16YKR086W URA1P28272 314 aaPredicted RBP1.36□□□□□ -2.19
PRP16YKR086W PEX6P33760 1030 aa1.36□□□□□ -2.19
PRP16YKR086W RFC1P38630 861 aaKnown RBP1.36□□□□□ -2.19
PRP16YKR086W BAP3P41815 604 aa1.36□□□□□ -2.19
PRP16YKR086W UBC9P50623 157 aaPredicted RBP1.36□□□□□ -2.19
PRP16YKR086W TAD1P53065 400 aa1.36□□□□□ -2.19
PRP16YKR086W SUB1P54000 292 aaKnown RBP1.36□□□□□ -2.19
PRP16YKR086W GUD1Q07729 489 aa1.36□□□□□ -2.19
PRP16YKR086W YLR419WQ06698 1435 aaKnown RBP1.36□□□□□ -2.19
PRP16YKR086W ERG4P25340 473 aa1.36□□□□□ -2.19
PRP16YKR086W SUL1P38359 859 aa1.36□□□□□ -2.19
PRP16YKR086W BUD6P41697 788 aa1.36□□□□□ -2.19
PRP16YKR086W YGR283CP53336 341 aaPredicted RBP1.36□□□□□ -2.19
PRP16YKR086W ASI2P53895 289 aa1.36□□□□□ -2.19
PRP16YKR086W YHM2Q04013 314 aa1.36□□□□□ -2.19
PRP16YKR086W VMS1Q04311 632 aaKnown RBP1.36□□□□□ -2.19
PRP16YKR086W YDR338CQ05497 695 aa1.36□□□□□ -2.19
PRP16YKR086W CAN1P04817 590 aa1.35□□□□□ -2.19
PRP16YKR086W PPR1P07272 904 aaPredicted RBP1.35□□□□□ -2.19
PRP16YKR086W CDC43P18898 376 aa1.35□□□□□ -2.19
PRP16YKR086W TSR4P25040 408 aa1.35□□□□□ -2.19
PRP16YKR086W STO1P34160 861 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W TDA3P38758 523 aa1.35□□□□□ -2.19
PRP16YKR086W YHR078WP38799 552 aa1.35□□□□□ -2.19
PRP16YKR086W DUN1P39009 513 aa1.35□□□□□ -2.19
PRP16YKR086W UBP6P43593 499 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W STB4P50104 949 aa1.35□□□□□ -2.19
PRP16YKR086W HMO1Q03973 246 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W LRS4Q04087 347 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W MUS81Q04149 632 aaPredicted RBP1.35□□□□□ -2.19
PRP16YKR086W HCA4P20448 770 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W PRP19P32523 503 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W SPC29P33419 253 aa1.35□□□□□ -2.19
PRP16YKR086W CHZ1P40019 153 aaPredicted RBP1.35□□□□□ -2.19
PRP16YKR086W SDS3P40505 327 aa1.35□□□□□ -2.19
PRP16YKR086W URN1Q06525 465 aaKnown RBP1.35□□□□□ -2.19
PRP16YKR086W BDF2Q07442 638 aa1.35□□□□□ -2.19
PRP16YKR086W MVD1P32377 396 aaKnown RBP1.34□□□□□ -2.19
PRP16YKR086W YPT7P32939 208 aa1.34□□□□□ -2.19
PRP16YKR086W MTH1P35198 433 aa1.34□□□□□ -2.19
PRP16YKR086W KTR4P38131 464 aa1.34□□□□□ -2.19
PRP16YKR086W CRP1P38845 465 aaKnown RBP1.34□□□□□ -2.19
PRP16YKR086W GDH3P39708 457 aa1.34□□□□□ -2.19
PRP16YKR086W STU2P46675 888 aa1.34□□□□□ -2.19
PRP16YKR086W ADY4Q05955 493 aa1.34□□□□□ -2.19
PRP16YKR086W RPN7Q06103 429 aaKnown RBP1.34□□□□□ -2.19
PRP16YKR086W RSF2P46974 1380 aa1.34□□□□□ -2.19
PRP16YKR086W PDR11P40550 1411 aa1.34□□□□□ -2.19
PRP16YKR086W SIR3P06701 978 aa1.34□□□□□ -2.19
PRP16YKR086W PFK2P16862 959 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
PRP16YKR086W EMP70P32802 667 aa1.34□□□□□ -2.19
PRP16YKR086W SEC6P32844 805 aa1.34□□□□□ -2.19
PRP16YKR086W SIC1P38634 284 aa1.34□□□□□ -2.19
PRP16YKR086W GID8P40208 455 aa1.34□□□□□ -2.19
PRP16YKR086W MDR1P53258 950 aa1.34□□□□□ -2.19
PRP16YKR086W DUS1P53759 423 aaKnown RBP1.34□□□□□ -2.19
PRP16YKR086W GPD1Q00055 391 aaKnown RBP1.34□□□□□ -2.19
PRP16YKR086W ATP25Q03153 612 aa1.34□□□□□ -2.19
PRP16YKR086W OMS1Q06668 471 aa1.34□□□□□ -2.19
PRP16YKR086W TRM11Q12463 433 aa1.34□□□□□ -2.19
PRP16YKR086W ALG7P07286 448 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms