RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	RSM26	P47141	266 aa		4.59	□□□□□ -1.68
FOX2	YKR009C	COS5	P47187	383 aa		4.59	□□□□□ -1.68
FOX2	YKR009C	HAP5	Q02516	242 aa		4.59	□□□□□ -1.68
FOX2	YKR009C	ECM22	Q05958	814 aa	Predicted RBP	4.59	□□□□□ -1.68
FOX2	YKR009C	TLG2	Q08144	397 aa		4.59	□□□□□ -1.68
FOX2	YKR009C	ABP140	Q08641	628 aa	Known RBP	4.59	□□□□□ -1.68
FOX2	YKR009C	NDJ1	Q12366	352 aa		4.59	□□□□□ -1.68
FOX2	YKR009C	AI5_BETA	Q9ZZX0	354 aa		4.59	□□□□□ -1.68
FOX2	YKR009C	TRP2	P00899	507 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	GPA1	P08539	472 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	OM45	P16547	393 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	FPR1	P20081	114 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	ECM32	P32644	1121 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	GGA2	P38817	585 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	SDS3	P40505	327 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	CIR1	P42940	261 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	CPR7	P47103	393 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	YGR237C	P50089	785 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	SPP382	Q06411	708 aa	Predicted RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	RRT12	P25381	491 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	TIF5	P38431	405 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	NUP60	P39705	539 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	PUS2	P53167	370 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	LSC2	P53312	427 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	KRE33	P53914	1056 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	WAR1	Q03631	944 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	PRM6	Q04705	352 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	YLR297W	Q05899	129 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	YOL075C	Q08234	1294 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	ETT1	Q08421	412 aa	Known RBP	4.58	□□□□□ -1.68
FOX2	YKR009C	SLX4	Q12098	748 aa		4.58	□□□□□ -1.68
FOX2	YKR009C	HOM2	P13663	365 aa	Known RBP	4.57	□□□□□ -1.68
FOX2	YKR009C	APL1	P27351	700 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	YBR225W	P38321	900 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	SHQ1	P40486	507 aa	Predicted RBP	4.57	□□□□□ -1.68
FOX2	YKR009C	RMD8	P43620	662 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	MUB1	Q03162	620 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	STE20	Q03497	939 aa	Known RBP	4.57	□□□□□ -1.68
FOX2	YKR009C	YHM2	Q04013	314 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	ECM3	Q99252	613 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	MSB2	P32334	1306 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	RPS3	P05750	240 aa	Known RBP	4.57	□□□□□ -1.68
FOX2	YKR009C	VBA3	P25594	458 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	KIP1	P28742	1111 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	VBA5	P36172	582 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	NOP4	P37838	685 aa	Known RBP	4.57	□□□□□ -1.68
FOX2	YKR009C	ATG12	P38316	186 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	STS1	P38637	319 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	FMO1	P38866	432 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	YER130C	P39959	443 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	RSC1	P53236	928 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	RGA2	Q06407	1009 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	CSR1	Q06705	408 aa	Known RBP	4.57	□□□□□ -1.68
FOX2	YKR009C	TRE1	Q08919	783 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	YPL216W	Q08964	1102 aa		4.57	□□□□□ -1.68
FOX2	YKR009C	RGR1	P19263	1082 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	SIS1	P25294	352 aa	Known RBP	4.56	□□□□□ -1.68
FOX2	YKR009C	CDC11	P32458	415 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	SEG2	P34250	1132 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	ECM13	P38195	257 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	DOT6	P40059	670 aa	Known RBP	4.56	□□□□□ -1.68
FOX2	YKR009C	CAF120	P53836	1060 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	ESBP6	P53918	673 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	YAP7	Q08182	245 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	SIR1	P21691	654 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	GPI10	P30777	616 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	MND1	P53102	219 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	YGL036W	P53185	909 aa	Predicted RBP	4.56	□□□□□ -1.68
FOX2	YKR009C	YNR061C	P53747	219 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	TBF1	Q02457	562 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	GIR2	Q03768	265 aa	Predicted RBP	4.56	□□□□□ -1.68
FOX2	YKR009C	AIM32	Q04689	311 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	MFB1	Q04922	465 aa		4.56	□□□□□ -1.68
FOX2	YKR009C	CAN1	P04817	590 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	EST1	P17214	699 aa	Predicted RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	PSO2	P30620	661 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	MRP4	P32902	394 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	PTC3	P34221	468 aa	Known RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	CSG2	P35206	410 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	YBR056W	P38081	501 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	YIL161W	P40449	235 aa	Known RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
FOX2	YKR009C	NBP2	Q12163	236 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	BEM2	P39960	2167 aa	Known RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	FUS1	P11710	512 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	PDC6	P26263	563 aa	Known RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	GSY2	P27472	705 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	SAC6	P32599	642 aa	Known RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	SWE1	P32944	819 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	SPT23	P35210	1082 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	GEM1	P39722	662 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	AVT2	P39981	480 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	CHS6	P40955	746 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	GUF1	P46943	645 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	EBS1	Q03466	884 aa	Known RBP	4.55	□□□□□ -1.68
FOX2	YKR009C	YML053C	Q04978	212 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	AFT2	Q08957	416 aa		4.55	□□□□□ -1.68
FOX2	YKR009C	PPR1	P07272	904 aa	Predicted RBP	4.54	□□□□□ -1.68
FOX2	YKR009C	KIN3	P22209	435 aa		4.54	□□□□□ -1.68
FOX2	YKR009C	EFB1	P32471	206 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms