RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	CNS1	P33313	385 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	YKL091C	P33324	310 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	DYS1	P38791	387 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	YNG2	P38806	282 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	JLP2	P40206	208 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	CTF18	P49956	741 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	YGR021W	P53212	290 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	VPS36	Q06696	566 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	LAP2	Q10740	671 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	LAM4	P38800	1345 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	JIP3	O13555	125 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	RAP1	P11938	827 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	RRP43	P25359	394 aa	Predicted RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	SRO9	P25567	434 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	RPT1	P33299	467 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	MTC2	P34246	357 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	DED81	P38707	554 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	ZIM17	P42844	174 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	GYP8	P43570	497 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	GCV2	P49095	1034 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	RNR4	P49723	345 aa	Known RBP	4.11	□□□□□ -1.75
SPT23	YKL020C	STB4	P50104	949 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	PEF1	P53238	335 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	RMD1	Q03441	430 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	SPC2	Q04969	178 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SPT23	YKL020C	RRI2	Q12348	645 aa		4.11	□□□□□ -1.75
SPT23	YKL020C	CIT2	P08679	460 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	YDJ1	P25491	409 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	NIP1	P32497	812 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	CBF2	P32504	956 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	DOA4	P32571	926 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	BCH2	P36122	765 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	STV1	P37296	890 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	RIP-Chip
SPT23	YKL020C	POP7	P38291	140 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SMF1	P38925	575 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	NDE1	P40215	560 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	ULP2	P40537	1034 aa	Predicted RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	ZIP2	P53061	704 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	COX20	Q04935	205 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SGO1	Q08490	590 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	TYW1	Q08960	810 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	ENO2	P00925	437 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	GCD1	P09032	578 aa	Predicted RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	DBF2	P22204	572 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	NAM7	P30771	971 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	BIO2	P32451	375 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	RRN3	P36070	627 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	ERT1	P38140	529 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	MRX3	P38172	270 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SPP381	P38282	291 aa	Predicted RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	YAP3	P38749	330 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	RPN10	P38886	268 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	BIM1	P40013	344 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	YER137C	P40083	148 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	BUD6	P41697	788 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	MMM1	P41800	426 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	DAK2	P43550	591 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	EPL1	P43572	832 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	GOR1	P53839	350 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SWP1	Q02795	286 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	VAC14	Q06708	880 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SPT23	YKL020C	NSE1	Q07913	336 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	VIK1	Q12045	647 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	PIF1	P07271	859 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SNA3	P14359	133 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	RGP1	P16664	663 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	PHO3	P24031	467 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	OXP1	P28273	1286 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SMI1	P32566	505 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	MRPL17	P36528	281 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	PGM2	P37012	569 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	RFT1	P38206	574 aa	Predicted RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	FES1	P38260	290 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	SPO22	P40511	975 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	BRE2	P43132	505 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	YGL176C	P46945	554 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	TOM22	P49334	152 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	LSB1	P53281	241 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	EGD1	Q02642	157 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	SND1	Q04007	877 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	ATG13	Q06628	738 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	DTD1	Q07648	150 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	CDC53	Q12018	815 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	REX3	Q12090	404 aa		4.1	□□□□□ -1.75
SPT23	YKL020C	RIB2	Q12362	591 aa	Known RBP	4.1	□□□□□ -1.75
SPT23	YKL020C	PDC1	P06169	563 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	SBP1	P10080	294 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	PRP4	P20053	465 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	UBA1	P22515	1024 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	KIP1	P28742	1111 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	YKT6	P36015	200 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	BSD2	P38356	321 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	YHI9	P38765	294 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	ALA1	P40825	983 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	YJR039W	P47107	1121 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	KAP114	P53067	1004 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	LIF1	P53150	421 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 113.1 ms