RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W PSA1P41940 361 aaKnown RBP3.47□□□□□ -1.85
PEP8YJL053W GIS2P53849 153 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
PEP8YJL053W UBX5Q06682 500 aa3.47□□□□□ -1.85
PEP8YJL053W CLF1Q12309 687 aaPredicted RBP3.47□□□□□ -1.85
PEP8YJL053W MSD1P15179 658 aaKnown RBP3.46□□□□□ -1.86
PEP8YJL053W THR1P17423 357 aaKnown RBP3.46□□□□□ -1.86
PEP8YJL053W TRZ1P36159 838 aaPredicted RBP3.46□□□□□ -1.86
PEP8YJL053W PMC1P38929 1173 aaPredicted RBP3.46□□□□□ -1.86
PEP8YJL053W YLR125WQ12138 136 aa3.46□□□□□ -1.86
PEP8YJL053W TOM70P07213 617 aaKnown RBP3.45□□□□□ -1.86
PEP8YJL053W ABF1P14164 731 aa3.45□□□□□ -1.86
PEP8YJL053W PPG1P32838 368 aa3.45□□□□□ -1.86
PEP8YJL053W YHR112CP38716 378 aa3.45□□□□□ -1.86
PEP8YJL053W LYS9P38999 446 aa3.45□□□□□ -1.86
PEP8YJL053W ZDS1P50111 915 aaKnown RBP3.45□□□□□ -1.86
PEP8YJL053W ZIP2P53061 704 aa3.45□□□□□ -1.86
PEP8YJL053W TAF8Q03750 510 aa3.45□□□□□ -1.86
PEP8YJL053W REH1Q06709 432 aa3.45□□□□□ -1.86
PEP8YJL053W NEW1Q08972 1196 aaKnown RBP3.45□□□□□ -1.86
PEP8YJL053W CAN1P04817 590 aa3.44□□□□□ -1.86
PEP8YJL053W YMC1P32331 307 aa3.44□□□□□ -1.86
PEP8YJL053W EMC3P36039 253 aa3.44□□□□□ -1.86
PEP8YJL053W NMD2P38798 1089 aaKnown RBP3.44□□□□□ -1.86
PEP8YJL053W ORM2Q06144 216 aa3.44□□□□□ -1.86
PEP8YJL053W HBN1Q96VH4 193 aa3.44□□□□□ -1.86
PEP8YJL053W PHO8P11491 566 aa3.43□□□□□ -1.86
PEP8YJL053W TIM23P32897 222 aa3.43□□□□□ -1.86
PEP8YJL053W APL2P36000 726 aaPredicted RBP3.43□□□□□ -1.86
PEP8YJL053W RRP14P36080 434 aaKnown RBP3.43□□□□□ -1.86
PEP8YJL053W SET3P36124 751 aa3.43□□□□□ -1.86
PEP8YJL053W NUP82P40368 713 aa3.43□□□□□ -1.86
PEP8YJL053W CCT5P40413 562 aaKnown RBP3.43□□□□□ -1.86
PEP8YJL053W BUD6P41697 788 aa3.43□□□□□ -1.86
PEP8YJL053W YDR514CQ04408 483 aa3.43□□□□□ -1.86
PEP8YJL053W POB3Q04636 552 aaKnown RBP3.43□□□□□ -1.86
PEP8YJL053W ULA1Q12059 462 aa3.43□□□□□ -1.86
PEP8YJL053W DIF1O13577 133 aa3.42□□□□□ -1.86
PEP8YJL053W CIT2P08679 460 aa3.42□□□□□ -1.86
PEP8YJL053W ADE2P21264 571 aaKnown RBP3.42□□□□□ -1.86
PEP8YJL053W YMC2P38087 329 aa3.42□□□□□ -1.86
PEP8YJL053W RLP7P40693 322 aaKnown RBP3.42□□□□□ -1.86
PEP8YJL053W UBP6P43593 499 aaKnown RBP3.42□□□□□ -1.86
PEP8YJL053W IRC8P47046 822 aa3.42□□□□□ -1.86
PEP8YJL053W RTA1P53047 317 aa3.42□□□□□ -1.86
PEP8YJL053W YGR151CP53287 111 aa3.42□□□□□ -1.86
PEP8YJL053W YBR182C-AQ8TGU6 64 aa3.42□□□□□ -1.86
PEP8YJL053W MBR1P23493 339 aa3.41□□□□□ -1.86
PEP8YJL053W THI4P32318 326 aa3.41□□□□□ -1.86
PEP8YJL053W HOT13P36078 116 aa3.41□□□□□ -1.86
PEP8YJL053W BET3P36149 193 aa3.41□□□□□ -1.86
PEP8YJL053W CRP1P38845 465 aaKnown RBP3.41□□□□□ -1.86
PEP8YJL053W RNH70P53331 553 aa3.41□□□□□ -1.86
PEP8YJL053W ORC4P54791 529 aa3.41□□□□□ -1.86
PEP8YJL053W PHO5P00635 467 aa3.4□□□□□ -1.87
PEP8YJL053W GYP8P43570 497 aa3.4□□□□□ -1.87
PEP8YJL053W ALG2P43636 503 aa3.4□□□□□ -1.87
PEP8YJL053W ASN1P49089 572 aaKnown RBP3.4□□□□□ -1.87
PEP8YJL053W ARG5,6Q01217 863 aa3.4□□□□□ -1.87
PEP8YJL053W HFD1Q04458 532 aa3.4□□□□□ -1.87
PEP8YJL053W MDM20Q12387 796 aaKnown RBP3.4□□□□□ -1.87
PEP8YJL053W HRP1Q99383 534 aaKnown RBP3.4□□□□□ -1.87
PEP8YJL053W ERR1P0CX10 437 aa3.39□□□□□ -1.87
PEP8YJL053W ERR2P0CX11 437 aa3.39□□□□□ -1.87
PEP8YJL053W GSY1P23337 708 aa3.39□□□□□ -1.87
PEP8YJL053W EUG1P32474 517 aa3.39□□□□□ -1.87
PEP8YJL053W KSP1P38691 1029 aaKnown RBP3.39□□□□□ -1.87
PEP8YJL053W FPR3P38911 411 aaKnown RBP3.39□□□□□ -1.87
PEP8YJL053W YGR283CP53336 341 aaPredicted RBP3.39□□□□□ -1.87
PEP8YJL053W ALG12P53730 551 aa3.39□□□□□ -1.87
PEP8YJL053W IRC3Q06683 689 aa3.39□□□□□ -1.87
PEP8YJL053W CCT4P39078 528 aaKnown RBP3.38□□□□□ -1.87
PEP8YJL053W GDH3P39708 457 aa3.38□□□□□ -1.87
PEP8YJL053W UTP14Q04500 899 aaKnown RBP3.38□□□□□ -1.87
PEP8YJL053W MCM21Q06675 368 aa3.38□□□□□ -1.87
PEP8YJL053W ERG6P25087 383 aaKnown RBP3.37□□□□□ -1.87
PEP8YJL053W BRN1P38170 754 aa3.37□□□□□ -1.87
PEP8YJL053W UGO1Q03327 502 aa3.37□□□□□ -1.87
PEP8YJL053W RGC1Q06108 1083 aaKnown RBP3.37□□□□□ -1.87
PEP8YJL053W AI5_ALPHAQ9ZZX1 630 aa3.37□□□□□ -1.87
PEP8YJL053W MSH2P25847 964 aa3.36□□□□□ -1.87
PEP8YJL053W DSS1P39112 969 aa3.36□□□□□ -1.87
PEP8YJL053W MIT1P40002 666 aa3.36□□□□□ -1.87
PEP8YJL053W ATG36P46983 293 aa3.36□□□□□ -1.87
PEP8YJL053W DOS2P54858 310 aa3.36□□□□□ -1.87
PEP8YJL053W YDL086WQ07505 273 aa3.36□□□□□ -1.87
PEP8YJL053W DIA2Q08496 732 aaPredicted RBP3.36□□□□□ -1.87
PEP8YJL053W BMS1Q08965 1183 aaKnown RBP3.36□□□□□ -1.87
PEP8YJL053W APL3P38065 1025 aa3.35□□□□□ -1.87
PEP8YJL053W PMT6P42934 759 aa3.35□□□□□ -1.87
PEP8YJL053W MAL11P53048 616 aa3.35□□□□□ -1.87
PEP8YJL053W MET7Q08645 548 aa3.35□□□□□ -1.87
PEP8YJL053W LAM4P38800 1345 aa3.35□□□□□ -1.87
PEP8YJL053W TPK2P06245 380 aa3.34□□□□□ -1.87
PEP8YJL053W PEX1P24004 1043 aa3.34□□□□□ -1.87
PEP8YJL053W SFP1P32432 683 aa3.34□□□□□ -1.87
PEP8YJL053W PEX6P33760 1030 aa3.34□□□□□ -1.87
PEP8YJL053W MNN1P39106 762 aa3.34□□□□□ -1.87
PEP8YJL053W GET2P40056 285 aa3.34□□□□□ -1.87
PEP8YJL053W TY4A-JP47023 414 aa3.34□□□□□ -1.87
PEP8YJL053W NMA2P53204 395 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms