RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C TSL1P38427 1098 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C VPS41P38959 992 aa2.23□□□□□ -2.05
RTT101YJL047C SWD1P39706 426 aa2.23□□□□□ -2.05
RTT101YJL047C SAW1P39735 261 aa2.23□□□□□ -2.05
RTT101YJL047C YER156CP40093 338 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C ALY2P47029 1046 aa2.23□□□□□ -2.05
RTT101YJL047C MSN5P52918 1224 aa2.23□□□□□ -2.05
RTT101YJL047C RKM2Q03942 479 aa2.23□□□□□ -2.05
RTT101YJL047C LRS4Q04087 347 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C YDR514CQ04408 483 aa2.23□□□□□ -2.05
RTT101YJL047C ADY3Q07732 790 aa2.23□□□□□ -2.05
RTT101YJL047C VHS3Q08438 674 aa2.23□□□□□ -2.05
RTT101YJL047C SGT2Q12118 346 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C PTC5Q12511 572 aa2.23□□□□□ -2.05
RTT101YJL047C PAR32Q12515 295 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C QCR6P00127 147 aa2.23□□□□□ -2.05
RTT101YJL047C GLN4P13188 809 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C CDC26P14724 124 aa2.23□□□□□ -2.05
RTT101YJL047C THR1P17423 357 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C TRX1P22217 103 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C ROX1P25042 368 aa2.23□□□□□ -2.05
RTT101YJL047C RRP7P25368 297 aaPredicted RBP2.23□□□□□ -2.05
RTT101YJL047C SRO9P25567 434 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C DAL1P32375 460 aa2.23□□□□□ -2.05
RTT101YJL047C NGG1P32494 702 aa2.23□□□□□ -2.05
RTT101YJL047C YLF2P38746 405 aa2.23□□□□□ -2.05
RTT101YJL047C YJL068CP40363 299 aa2.23□□□□□ -2.05
RTT101YJL047C VID28P40547 921 aa2.23□□□□□ -2.05
RTT101YJL047C DJP1P40564 432 aa2.23□□□□□ -2.05
RTT101YJL047C SEC27P41811 889 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C YFL054CP43549 646 aa2.23□□□□□ -2.05
RTT101YJL047C POL31P46957 487 aa2.23□□□□□ -2.05
RTT101YJL047C CTF18P49956 741 aa2.23□□□□□ -2.05
RTT101YJL047C YNR065CP53751 1116 aa2.23□□□□□ -2.05
RTT101YJL047C YCG1Q06680 1035 aa2.23□□□□□ -2.05
RTT101YJL047C CIR2Q08822 631 aa2.23□□□□□ -2.05
RTT101YJL047C KEL3Q08979 651 aaPredicted RBP2.23□□□□□ -2.05
RTT101YJL047C RTK1Q12100 620 aaPredicted RBP2.23□□□□□ -2.05
RTT101YJL047C PCD1Q12524 340 aa2.23□□□□□ -2.05
RTT101YJL047C TUF1P02992 437 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C LEU2P04173 364 aaPredicted RBP2.22□□□□□ -2.05
RTT101YJL047C SES1P07284 462 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C FUM1P08417 488 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C SWI6P09959 803 aa2.22□□□□□ -2.05
RTT101YJL047C REC107P21651 314 aa2.22□□□□□ -2.05
RTT101YJL047C MNE1P24720 663 aa2.22□□□□□ -2.05
RTT101YJL047C SWI4P25302 1093 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C UGA3P26370 528 aa2.22□□□□□ -2.05
RTT101YJL047C GPI10P30777 616 aa2.22□□□□□ -2.05
RTT101YJL047C RPN10P38886 268 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C STT3P39007 718 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C INP51P40559 946 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C LCB2P40970 561 aa2.22□□□□□ -2.05
RTT101YJL047C IRC5P43610 853 aa2.22□□□□□ -2.05
RTT101YJL047C BIO5P53744 561 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C MTD1Q02046 320 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C NGL1Q08213 363 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C PSF3Q12146 194 aa2.22□□□□□ -2.05
RTT101YJL047C RTN2Q12443 393 aa2.22□□□□□ -2.05
RTT101YJL047C STF1P01098 86 aa2.22□□□□□ -2.05
RTT101YJL047C CMP2P14747 604 aa2.22□□□□□ -2.05
RTT101YJL047C PFK2P16862 959 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
RTT101YJL047C MCM3P24279 971 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C CLB4P24871 460 aa2.22□□□□□ -2.05
RTT101YJL047C RPT3P33298 428 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C SLA2P33338 968 aa2.22□□□□□ -2.05
RTT101YJL047C TGL1P34163 548 aa2.22□□□□□ -2.05
RTT101YJL047C AHP1P38013 176 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C PPE1P38796 400 aa2.22□□□□□ -2.05
RTT101YJL047C STL1P39932 569 aa2.22□□□□□ -2.05
RTT101YJL047C PSF2P40359 213 aa2.22□□□□□ -2.05
RTT101YJL047C FET4P40988 552 aa2.22□□□□□ -2.05
RTT101YJL047C SKP2P42843 763 aa2.22□□□□□ -2.05
RTT101YJL047C CIR1P42940 261 aa2.22□□□□□ -2.05
RTT101YJL047C YJR098CP47139 656 aa2.22□□□□□ -2.05
RTT101YJL047C CCM1P48237 864 aaPredicted RBP2.22□□□□□ -2.05
RTT101YJL047C SGF73P53165 657 aa2.22□□□□□ -2.05
RTT101YJL047C ALF1P53904 254 aa2.22□□□□□ -2.05
RTT101YJL047C ARP4P80428 489 aa2.22□□□□□ -2.05
RTT101YJL047C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
RTT101YJL047C TIM50Q02776 476 aa2.22□□□□□ -2.05
RTT101YJL047C HAS1Q03532 505 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C HED1Q03937 162 aa2.22□□□□□ -2.05
RTT101YJL047C AIM32Q04689 311 aa2.22□□□□□ -2.05
RTT101YJL047C YOR059CQ08448 450 aaKnown RBP2.22□□□□□ -2.05
RTT101YJL047C YBR182C-AQ8TGU6 64 aa2.22□□□□□ -2.05
RTT101YJL047C YLR149CQ99296 730 aa2.22□□□□□ -2.05
RTT101YJL047C PHO5P00635 467 aa2.21□□□□□ -2.06
RTT101YJL047C APE1P14904 514 aa2.21□□□□□ -2.06
RTT101YJL047C POT1P27796 417 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
RTT101YJL047C PRO1P32264 428 aa2.21□□□□□ -2.06
RTT101YJL047C TFB1P32776 642 aa2.21□□□□□ -2.06
RTT101YJL047C MDL1P33310 695 aa2.21□□□□□ -2.06
RTT101YJL047C RIB7P33312 244 aa2.21□□□□□ -2.06
RTT101YJL047C GPB2P39717 880 aa2.21□□□□□ -2.06
RTT101YJL047C FMP10P40098 244 aa2.21□□□□□ -2.06
RTT101YJL047C SEC28P40509 296 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C SPO22P40511 975 aa2.21□□□□□ -2.06
RTT101YJL047C RLP7P40693 322 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C SAP4P53036 818 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms