RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W POL31P46957 487 aa5.39□□□□□ -1.55
MSH1YHR120W YJL045WP47052 634 aa5.39□□□□□ -1.55
MSH1YHR120W YLR257WQ06146 321 aaKnown RBP5.39□□□□□ -1.55
MSH1YHR120W GIS3Q12418 502 aa5.39□□□□□ -1.55
MSH1YHR120W YOL098CQ12496 1037 aa5.39□□□□□ -1.55
MSH1YHR120W SPO12P17123 173 aa5.38□□□□□ -1.55
MSH1YHR120W PEX1P24004 1043 aa5.38□□□□□ -1.55
MSH1YHR120W RRP43P25359 394 aaPredicted RBP5.38□□□□□ -1.55
MSH1YHR120W VPH1P32563 840 aaKnown RBP5.38□□□□□ -1.55
MSH1YHR120W SWI3P32591 825 aa5.38□□□□□ -1.55
MSH1YHR120W RDH54P38086 958 aa5.38□□□□□ -1.55
MSH1YHR120W MED8P38304 223 aa5.38□□□□□ -1.55
MSH1YHR120W PCM1P38628 557 aaKnown RBP5.38□□□□□ -1.55
MSH1YHR120W ECM1P39715 212 aa5.38□□□□□ -1.55
MSH1YHR120W PXA1P41909 870 aa5.38□□□□□ -1.55
MSH1YHR120W NOP13P53883 403 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
MSH1YHR120W TBF1Q02457 562 aa5.38□□□□□ -1.55
MSH1YHR120W YLR287CQ05881 355 aa5.38□□□□□ -1.55
MSH1YHR120W OMS1Q06668 471 aa5.38□□□□□ -1.55
MSH1YHR120W VPS3P23643 1011 aa5.38□□□□□ -1.55
MSH1YHR120W RAD27P26793 382 aa5.38□□□□□ -1.55
MSH1YHR120W YMR102CQ03177 834 aa5.38□□□□□ -1.55
MSH1YHR120W GIR2Q03768 265 aaPredicted RBP5.38□□□□□ -1.55
MSH1YHR120W DAS2Q12084 232 aa5.38□□□□□ -1.55
MSH1YHR120W APM4Q99186 491 aa5.38□□□□□ -1.55
MSH1YHR120W TPK1P06244 397 aa5.37□□□□□ -1.55
MSH1YHR120W SNF1P06782 633 aaKnown RBP5.37□□□□□ -1.55
MSH1YHR120W PPR1P07272 904 aaPredicted RBP5.37□□□□□ -1.55
MSH1YHR120W CDC42P19073 191 aa5.37□□□□□ -1.55
MSH1YHR120W PGS1P25578 521 aa5.37□□□□□ -1.55
MSH1YHR120W AGP2P38090 596 aa5.37□□□□□ -1.55
MSH1YHR120W RGD1P38339 666 aa5.37□□□□□ -1.55
MSH1YHR120W SPT8P38915 602 aa5.37□□□□□ -1.55
MSH1YHR120W SMF1P38925 575 aa5.37□□□□□ -1.55
MSH1YHR120W RPA49Q01080 415 aaPredicted RBP5.37□□□□□ -1.55
MSH1YHR120W ADA2Q02336 434 aa5.37□□□□□ -1.55
MSH1YHR120W RGA2Q06407 1009 aa5.37□□□□□ -1.55
MSH1YHR120W IWR1Q07532 353 aaPredicted RBP5.37□□□□□ -1.55
MSH1YHR120W RRP6Q12149 733 aaKnown RBP5.37□□□□□ -1.55
MSH1YHR120W COQ8P27697 501 aa5.37□□□□□ -1.55
MSH1YHR120W PEP7P32609 515 aa5.37□□□□□ -1.55
MSH1YHR120W RPC25P35718 212 aa5.37□□□□□ -1.55
MSH1YHR120W TBS1P38114 1094 aa5.37□□□□□ -1.55
MSH1YHR120W YAP5P40574 245 aa5.37□□□□□ -1.55
MSH1YHR120W MAD1P40957 749 aa5.37□□□□□ -1.55
MSH1YHR120W MIC19P43594 170 aa5.37□□□□□ -1.55
MSH1YHR120W ALT1P52893 592 aa5.37□□□□□ -1.55
MSH1YHR120W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
MSH1YHR120W CEF1Q03654 590 aaPredicted RBP5.37□□□□□ -1.55
MSH1YHR120W TIF35Q04067 274 aaKnown RBP5.37□□□□□ -1.55
MSH1YHR120W ABP140Q08641 628 aaKnown RBP5.37□□□□□ -1.55
MSH1YHR120W YDL206WQ12424 762 aa5.37□□□□□ -1.55
MSH1YHR120W CHS1P08004 1131 aa5.37□□□□□ -1.55
MSH1YHR120W MAS1P10507 462 aa5.37□□□□□ -1.55
MSH1YHR120W SCJ1P25303 377 aa5.37□□□□□ -1.55
MSH1YHR120W RRT12P25381 491 aa5.37□□□□□ -1.55
MSH1YHR120W CDC11P32458 415 aa5.37□□□□□ -1.55
MSH1YHR120W GCG1P32656 232 aaKnown RBP5.37□□□□□ -1.55
MSH1YHR120W SLA2P33338 968 aa5.37□□□□□ -1.55
MSH1YHR120W KIC1P38692 1080 aa5.37□□□□□ -1.55
MSH1YHR120W YNR014WP53719 212 aa5.37□□□□□ -1.55
MSH1YHR120W OPY2Q06810 360 aa5.37□□□□□ -1.55
MSH1YHR120W SGO1Q08490 590 aa5.37□□□□□ -1.55
MSH1YHR120W YPR027CQ12079 277 aa5.37□□□□□ -1.55
MSH1YHR120W SPE1P08432 466 aa5.36□□□□□ -1.55
MSH1YHR120W APL1P27351 700 aa5.36□□□□□ -1.55
MSH1YHR120W YKL023WP36103 277 aaKnown RBP5.36□□□□□ -1.55
MSH1YHR120W PEX28P38848 579 aa5.36□□□□□ -1.55
MSH1YHR120W SAH1P39954 449 aaKnown RBP5.36□□□□□ -1.55
MSH1YHR120W KAP123P40069 1113 aaKnown RBP5.36□□□□□ -1.55
MSH1YHR120W MOB1P40484 314 aa5.36□□□□□ -1.55
MSH1YHR120W CPR7P47103 393 aa5.36□□□□□ -1.55
MSH1YHR120W COS5P47187 383 aa5.36□□□□□ -1.55
MSH1YHR120W GAL10P04397 699 aa5.36□□□□□ -1.55
MSH1YHR120W APE1P14904 514 aa5.36□□□□□ -1.55
MSH1YHR120W KGD2P19262 463 aaPredicted RBP5.36□□□□□ -1.55
MSH1YHR120W COX11P19516 300 aaKnown RBP5.36□□□□□ -1.55
MSH1YHR120W CBF2P32504 956 aa5.36□□□□□ -1.55
MSH1YHR120W RIM4P38741 713 aa5.36□□□□□ -1.55
MSH1YHR120W RIX1P38883 763 aaPredicted RBP5.36□□□□□ -1.55
MSH1YHR120W ZAP1P47043 880 aa5.36□□□□□ -1.55
MSH1YHR120W YJR079WP47126 109 aa5.36□□□□□ -1.55
MSH1YHR120W UME1Q03010 460 aa5.36□□□□□ -1.55
MSH1YHR120W PPM1Q04081 328 aa5.36□□□□□ -1.55
MSH1YHR120W YLR297WQ05899 129 aa5.36□□□□□ -1.55
MSH1YHR120W SPO75Q07798 868 aa5.36□□□□□ -1.55
MSH1YHR120W YOR238WQ08634 303 aa5.36□□□□□ -1.55
MSH1YHR120W LEA1Q08963 238 aaPredicted RBP5.36□□□□□ -1.55
MSH1YHR120W BTN2P53286 410 aa5.35□□□□□ -1.55
MSH1YHR120W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55 RIP-Chip
MSH1YHR120W STE23Q06010 1027 aa5.35□□□□□ -1.55
MSH1YHR120W SFH1Q06168 426 aa5.35□□□□□ -1.55
MSH1YHR120W CSR1Q06705 408 aaKnown RBP5.35□□□□□ -1.55
MSH1YHR120W YOR223WQ12015 292 aa5.35□□□□□ -1.55
MSH1YHR120W RAD59Q12223 238 aa5.35□□□□□ -1.55
MSH1YHR120W RUD3Q12234 484 aaKnown RBP5.35□□□□□ -1.55
MSH1YHR120W KEX2P13134 814 aa5.35□□□□□ -1.55
MSH1YHR120W RNR1P21524 888 aaKnown RBP5.35□□□□□ -1.55
MSH1YHR120W SMC2P38989 1170 aaKnown RBP5.35□□□□□ -1.55
MSH1YHR120W IES1P43579 692 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms