RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	MNL1	P38888	796 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	KHA1	P40309	873 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	MNT2	P53059	558 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	YGL140C	P53120	1219 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	GPG1	P53130	126 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	RBG2	P53295	368 aa	Known RBP	5.09	□□□□□ -1.59
SEC9	YGR009C	MRPL19	P53875	158 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	TOF2	Q02208	771 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	ARA2	Q04212	335 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	GFD1	Q04839	188 aa	Known RBP	5.09	□□□□□ -1.59
SEC9	YGR009C	PIB1	Q06651	286 aa		5.09	□□□□□ -1.59
SEC9	YGR009C	CAR2	P07991	424 aa	Known RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	HSF1	P10961	833 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	SRS2	P12954	1174 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	RPC31	P17890	251 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.6	not detected
SEC9	YGR009C	ICL1	P28240	557 aa	Predicted RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	RPC34	P32910	317 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	MDL1	P33310	695 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	UTP11	P34247	250 aa	Predicted RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	MMS4	P38257	691 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	CBR1	P38626	284 aa	Known RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	TCD1	P38756	429 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	RSC30	P38781	883 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	UPF3	P48412	387 aa	Known RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	YDL183C	P48569	320 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	STB4	P50104	949 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	ASE1	P50275	885 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	MON1	P53129	644 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	ORM1	P53224	222 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	YAP1802	P53309	568 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	GTR1	Q00582	310 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	PLP1	Q04004	230 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	SYF1	Q04048	859 aa	Predicted RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	SSL1	Q04673	461 aa	Predicted RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	MRL1	Q06815	381 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	YOR289W	Q12012	251 aa	Predicted RBP	5.09	□□□□□ -1.6
SEC9	YGR009C	TY3A-G	Q12173	290 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	TY3A-I	Q99219	290 aa		5.09	□□□□□ -1.6
SEC9	YGR009C	STH1	P32597	1359 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	LAM4	P38800	1345 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	ERR1	P0CX10	437 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	ERR2	P0CX11	437 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	MIP1	P15801	1254 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	FUS3	P16892	353 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	PRP9	P19736	530 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	DBF4	P32325	704 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	PRP40	P33203	583 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	LOT5	P34234	306 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	EAP1	P36041	632 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	NUP133	P36161	1157 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	TYS1	P36421	394 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	PCH2	P38126	564 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	CHK1	P38147	527 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	IFA38	P38286	347 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	YBR242W	P38331	238 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	TIF11	P38912	153 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	RAD55	P38953	406 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	GPP2	P40106	250 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	PCI8	P40512	444 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	NAS2	P40555	220 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	HLJ1	P48353	224 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	PIB2	P53191	635 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	YGR250C	P53316	781 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	BRE5	P53741	515 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	YNR068C	P53754	272 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	PRO2	P54885	456 aa	Known RBP	5.08	□□□□□ -1.6
SEC9	YGR009C	PEX25	Q02969	394 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	DYN3	Q04949	312 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	GRS2	Q06817	618 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	SSN2	P38931	1420 aa		5.08	□□□□□ -1.6
SEC9	YGR009C	NOT3	P06102	836 aa	Known RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	THR1	P17423	357 aa	Known RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	SAN1	P22470	610 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	CAD1	P24813	409 aa	Known RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	CMK1	P27466	446 aa	Known RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	CSE4	P36012	229 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	YHR054C	P38780	354 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	MTG2	P38860	518 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	PRM9	P39551	298 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	LSM5	P40089	93 aa	Known RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	PCL10	P53124	433 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	COG2	P53271	262 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	YNR061C	P53747	219 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	DSE4	P53753	1117 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	KTR6	P54070	446 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	INA17	Q02888	182 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	RVB1	Q03940	463 aa	Known RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	RGA2	Q06407	1009 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	MLC2	Q06580	163 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	YCG1	Q06680	1035 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	SYO1	Q07395	620 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	TAH18	Q12181	623 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	MDY2	Q12285	212 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	SFI1	Q12369	946 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	TRP3	P00937	484 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
SEC9	YGR009C	YML002W	P0CF17	737 aa		5.07	□□□□□ -1.6
SEC9	YGR009C	PRP16	P15938	1071 aa	Predicted RBP	5.07	□□□□□ -1.6
SEC9	YGR009C	PRP2	P20095	876 aa	Predicted RBP	5.07	□□□□□ -1.6

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