RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W MYO5Q04439 1219 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W RSA3Q05942 220 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W MRD1Q06106 887 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W MRL1Q06815 381 aa2.5□□□□□ -2.01
BRP1YGL007W FMP25Q08023 583 aa2.5□□□□□ -2.01
BRP1YGL007W MET7Q08645 548 aa2.5□□□□□ -2.01
BRP1YGL007W MDM20Q12387 796 aaKnown RBP2.5□□□□□ -2.01
BRP1YGL007W CIT1P00890 479 aa2.49□□□□□ -2.01
BRP1YGL007W SAM1P10659 382 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W RPL8AP17076 256 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W MAK31P23059 88 aa2.49□□□□□ -2.01
BRP1YGL007W YUR1P26725 428 aa2.49□□□□□ -2.01
BRP1YGL007W SHP1P34223 423 aa2.49□□□□□ -2.01
BRP1YGL007W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
BRP1YGL007W UIP5P36137 443 aa2.49□□□□□ -2.01
BRP1YGL007W KSP1P38691 1029 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W CHS7P38843 316 aa2.49□□□□□ -2.01
BRP1YGL007W CRG1P38892 291 aaRIP-Chip data2.49□□□□□ -2.01not detected
BRP1YGL007W HXT13P39924 564 aa2.49□□□□□ -2.01
BRP1YGL007W SNM1P40993 198 aa2.49□□□□□ -2.01
BRP1YGL007W YJL045WP47052 634 aa2.49□□□□□ -2.01
BRP1YGL007W ENP2P48234 707 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W RTA1P53047 317 aa2.49□□□□□ -2.01
BRP1YGL007W YGL140CP53120 1219 aa2.49□□□□□ -2.01
BRP1YGL007W HXT17P53631 564 aa2.49□□□□□ -2.01
BRP1YGL007W HXT15P54854 567 aa2.49□□□□□ -2.01
BRP1YGL007W RPT6Q01939 405 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W YVH1Q02256 364 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W PLB2Q03674 706 aa2.49□□□□□ -2.01
BRP1YGL007W BUL2Q03758 920 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W SPH1Q06160 661 aa2.49□□□□□ -2.01
BRP1YGL007W TMA10Q06177 86 aa2.49□□□□□ -2.01
BRP1YGL007W SPN1Q06505 410 aaPredicted RBP2.49□□□□□ -2.01
BRP1YGL007W RIM20Q12033 661 aa2.49□□□□□ -2.01
BRP1YGL007W ERP3Q12403 225 aa2.49□□□□□ -2.01
BRP1YGL007W NOP14Q99207 810 aaKnown RBP2.49□□□□□ -2.01
BRP1YGL007W RAD50P12753 1312 aa2.48□□□□□ -2.01
BRP1YGL007W PHR1P05066 565 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
BRP1YGL007W VAS1P07806 1104 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W STE11P23561 717 aa2.48□□□□□ -2.01
BRP1YGL007W RIT1P23796 513 aa2.48□□□□□ -2.01
BRP1YGL007W RAD27P26793 382 aa2.48□□□□□ -2.01
BRP1YGL007W SWE1P32944 819 aa2.48□□□□□ -2.01
BRP1YGL007W LST4P34239 828 aa2.48□□□□□ -2.01
BRP1YGL007W MCR1P36060 302 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W YKR018CP36114 725 aa2.48□□□□□ -2.01
BRP1YGL007W TOM71P38825 639 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W SHU2P38957 223 aa2.48□□□□□ -2.01
BRP1YGL007W RRP8P38961 392 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W MBP1P39678 833 aa2.48□□□□□ -2.01
BRP1YGL007W NOC2P39744 710 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W SKP2P42843 763 aa2.48□□□□□ -2.01
BRP1YGL007W YFL040WP43562 540 aa2.48□□□□□ -2.01
BRP1YGL007W PHO23P50947 330 aa2.48□□□□□ -2.01
BRP1YGL007W YGL039WP53183 348 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W ROD1Q02805 837 aa2.48□□□□□ -2.01
BRP1YGL007W FMP30Q02883 468 aa2.48□□□□□ -2.01
BRP1YGL007W VPS30Q02948 557 aa2.48□□□□□ -2.01
BRP1YGL007W ECM16Q04217 1267 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W YMR321CQ04898 105 aa2.48□□□□□ -2.01
BRP1YGL007W DUS3Q06053 668 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W EAF1Q06337 982 aa2.48□□□□□ -2.01
BRP1YGL007W SUE1Q06524 206 aa2.48□□□□□ -2.01
BRP1YGL007W GUD1Q07729 489 aa2.48□□□□□ -2.01
BRP1YGL007W SPO75Q07798 868 aa2.48□□□□□ -2.01
BRP1YGL007W ISA1Q07821 250 aaPredicted RBP2.48□□□□□ -2.01
BRP1YGL007W TMA46Q12000 345 aaKnown RBP2.48□□□□□ -2.01
BRP1YGL007W YLR125WQ12138 136 aa2.48□□□□□ -2.01
BRP1YGL007W CLF1Q12309 687 aaPredicted RBP2.48□□□□□ -2.01
BRP1YGL007W OSH2Q12451 1283 aa2.48□□□□□ -2.01
BRP1YGL007W HEM1P09950 548 aaPredicted RBP2.47□□□□□ -2.01
BRP1YGL007W POX1P13711 748 aa2.47□□□□□ -2.01
BRP1YGL007W HSP60P19882 572 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W TKL1P23254 680 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
BRP1YGL007W MSH3P25336 1018 aa2.47□□□□□ -2.01
BRP1YGL007W AGP1P25376 633 aa2.47□□□□□ -2.01
BRP1YGL007W ARE1P25628 610 aa2.47□□□□□ -2.01
BRP1YGL007W MSH2P25847 964 aa2.47□□□□□ -2.01
BRP1YGL007W CDC20P26309 610 aa2.47□□□□□ -2.01
BRP1YGL007W MCM4P30665 933 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W YSC84P32793 468 aa2.47□□□□□ -2.01
BRP1YGL007W TFC4P33339 1025 aa2.47□□□□□ -2.01
BRP1YGL007W BET3P36149 193 aa2.47□□□□□ -2.01
BRP1YGL007W NDT80P38830 627 aa2.47□□□□□ -2.01
BRP1YGL007W VPS45P38932 577 aa2.47□□□□□ -2.01
BRP1YGL007W CSM2P40465 213 aa2.47□□□□□ -2.01
BRP1YGL007W SEC26P41810 973 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W PFD1P46988 109 aa2.47□□□□□ -2.01
BRP1YGL007W RSM26P47141 266 aa2.47□□□□□ -2.01
BRP1YGL007W CTR1P49573 406 aa2.47□□□□□ -2.01
BRP1YGL007W PTA1Q01329 785 aaPredicted RBP2.47□□□□□ -2.01
BRP1YGL007W MDM1Q01846 1127 aa2.47□□□□□ -2.01
BRP1YGL007W NOG1Q02892 647 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W SLD5Q03406 294 aa2.47□□□□□ -2.01
BRP1YGL007W UTP5Q04177 643 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W UTP14Q04500 899 aaKnown RBP2.47□□□□□ -2.01
BRP1YGL007W TFC6Q06339 672 aa2.47□□□□□ -2.01
BRP1YGL007W RXT3Q07458 294 aa2.47□□□□□ -2.01
BRP1YGL007W NTG2Q08214 380 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms