RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YMR027WQ04371 470 aa6.84□□□□□ -1.31
YPT1YFL038C THS1P04801 734 aaKnown RBP6.83□□□□□ -1.32
YPT1YFL038C PKC1P24583 1151 aa6.83□□□□□ -1.32
YPT1YFL038C KIN82P25341 720 aa6.83□□□□□ -1.32
YPT1YFL038C PTC3P34221 468 aaKnown RBP6.83□□□□□ -1.32
YPT1YFL038C TMN3P40071 706 aa6.83□□□□□ -1.32
YPT1YFL038C SBE2P42223 864 aaKnown RBP6.83□□□□□ -1.32
YPT1YFL038C SCD6P45978 349 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
YPT1YFL038C YML6P51998 286 aa6.83□□□□□ -1.32
YPT1YFL038C ZIP2P53061 704 aa6.83□□□□□ -1.32
YPT1YFL038C NOG2P53742 486 aaKnown RBP6.83□□□□□ -1.32
YPT1YFL038C YDR090CQ03193 310 aa6.83□□□□□ -1.32
YPT1YFL038C PEX29Q03370 554 aa6.83□□□□□ -1.32
YPT1YFL038C CEF1Q03654 590 aaPredicted RBP6.83□□□□□ -1.32
YPT1YFL038C CWC15Q03772 175 aaKnown RBP6.83□□□□□ -1.32
YPT1YFL038C MAG2Q06436 670 aaKnown RBP6.83□□□□□ -1.32
YPT1YFL038C RAD10P06838 210 aa6.82□□□□□ -1.32
YPT1YFL038C VMA4P22203 233 aaKnown RBP6.82□□□□□ -1.32
YPT1YFL038C SPT5P27692 1063 aaKnown RBP6.82□□□□□ -1.32
YPT1YFL038C TPS2P31688 896 aaKnown RBP6.82□□□□□ -1.32
YPT1YFL038C RAD5P32849 1169 aaPredicted RBP6.82□□□□□ -1.32
YPT1YFL038C SEG2P34250 1132 aa6.82□□□□□ -1.32
YPT1YFL038C YBR032WP38223 100 aa6.82□□□□□ -1.32
YPT1YFL038C SPC97P38863 823 aa6.82□□□□□ -1.32
YPT1YFL038C ARG2P40360 574 aa6.82□□□□□ -1.32
YPT1YFL038C TMA108P40462 946 aa6.82□□□□□ -1.32
YPT1YFL038C SAE2P46946 345 aa6.82□□□□□ -1.32
YPT1YFL038C HLJ1P48353 224 aa6.82□□□□□ -1.32
YPT1YFL038C RRT6P53117 311 aaPredicted RBP6.82□□□□□ -1.32
YPT1YFL038C HOP2P53187 214 aa6.82□□□□□ -1.32
YPT1YFL038C COG6P53959 839 aa6.82□□□□□ -1.32
YPT1YFL038C GTR1Q00582 310 aa6.82□□□□□ -1.32
YPT1YFL038C SLD5Q03406 294 aa6.82□□□□□ -1.32
YPT1YFL038C MSH6Q03834 1242 aa6.82□□□□□ -1.32
YPT1YFL038C SHE9Q04172 456 aa6.82□□□□□ -1.32
YPT1YFL038C KAP95Q06142 861 aaKnown RBP6.82□□□□□ -1.32
YPT1YFL038C GPI13Q07830 1017 aa6.82□□□□□ -1.32
YPT1YFL038C ABP140Q08641 628 aaKnown RBP6.82□□□□□ -1.32
YPT1YFL038C CFT2Q12102 859 aaPredicted RBP6.82□□□□□ -1.32
YPT1YFL038C SGT2Q12118 346 aaKnown RBP6.82□□□□□ -1.32
YPT1YFL038C YDR018CQ12185 396 aa6.82□□□□□ -1.32
YPT1YFL038C RRD2Q12461 358 aa6.82□□□□□ -1.32
YPT1YFL038C PRP4P20053 465 aaKnown RBP6.81□□□□□ -1.32
YPT1YFL038C BAS1P22035 811 aa6.81□□□□□ -1.32
YPT1YFL038C TRX1P22217 103 aaKnown RBP6.81□□□□□ -1.32
YPT1YFL038C RRT12P25381 491 aa6.81□□□□□ -1.32
YPT1YFL038C PSE1P32337 1089 aaKnown RBP6.81□□□□□ -1.32
YPT1YFL038C IRE1P32361 1115 aa6.81□□□□□ -1.32
YPT1YFL038C GYP6P32806 458 aa6.81□□□□□ -1.32
YPT1YFL038C IXR1P33417 597 aa6.81□□□□□ -1.32
YPT1YFL038C HEL1P36113 551 aa6.81□□□□□ -1.32
YPT1YFL038C CDC27P38042 758 aa6.81□□□□□ -1.32
YPT1YFL038C DUG2P38149 878 aa6.81□□□□□ -1.32
YPT1YFL038C MMS4P38257 691 aa6.81□□□□□ -1.32
YPT1YFL038C PCM1P38628 557 aaKnown RBP6.81□□□□□ -1.32
YPT1YFL038C APM2P38700 605 aa6.81□□□□□ -1.32
YPT1YFL038C SNZ3P43545 298 aa6.81□□□□□ -1.32
YPT1YFL038C RGD2P43556 714 aa6.81□□□□□ -1.32
YPT1YFL038C YJL045WP47052 634 aa6.81□□□□□ -1.32
YPT1YFL038C JJJ3P47138 172 aa6.81□□□□□ -1.32
YPT1YFL038C SNZ2P53824 298 aa6.81□□□□□ -1.32
YPT1YFL038C TRS130Q03660 1102 aa6.81□□□□□ -1.32
YPT1YFL038C PRM6Q04705 352 aa6.81□□□□□ -1.32
YPT1YFL038C YMR321CQ04898 105 aa6.81□□□□□ -1.32
YPT1YFL038C THI7Q05998 598 aa6.81□□□□□ -1.32
YPT1YFL038C YLR177WQ06251 628 aa6.81□□□□□ -1.32
YPT1YFL038C RIB2Q12362 591 aaKnown RBP6.81□□□□□ -1.32
YPT1YFL038C CMD1P06787 147 aaKnown RBP6.8□□□□□ -1.32
YPT1YFL038C KAR4P25583 335 aa6.8□□□□□ -1.32
YPT1YFL038C MGT1P26188 188 aa6.8□□□□□ -1.32
YPT1YFL038C MVD1P32377 396 aaKnown RBP6.8□□□□□ -1.32
YPT1YFL038C YMC2P38087 329 aa6.8□□□□□ -1.32
YPT1YFL038C HSM3P38348 480 aa6.8□□□□□ -1.32
YPT1YFL038C MSR1P38714 643 aa6.8□□□□□ -1.32
YPT1YFL038C PNT1P38969 423 aa6.8□□□□□ -1.32
YPT1YFL038C SAH1P39954 449 aaKnown RBP6.8□□□□□ -1.32
YPT1YFL038C ALA1P40825 983 aaKnown RBP6.8□□□□□ -1.32
YPT1YFL038C TMA22P47089 198 aaPredicted RBP6.8□□□□□ -1.32
YPT1YFL038C ILM1P47155 203 aa6.8□□□□□ -1.32
YPT1YFL038C TAF6P53040 516 aa6.8□□□□□ -1.32
YPT1YFL038C LSC1P53598 329 aaKnown RBP6.8□□□□□ -1.32
YPT1YFL038C YNL040WP53960 456 aaPredicted RBP6.8□□□□□ -1.32
YPT1YFL038C CDC73Q06697 393 aa6.8□□□□□ -1.32
YPT1YFL038C VHS3Q08438 674 aa6.8□□□□□ -1.32
YPT1YFL038C HFI1Q12060 488 aa6.8□□□□□ -1.32
YPT1YFL038C ILS1P09436 1072 aaKnown RBP6.79□□□□□ -1.32
YPT1YFL038C ASP3-2P0CX77 362 aa6.79□□□□□ -1.32
YPT1YFL038C ASP3-3P0CX78 362 aa6.79□□□□□ -1.32
YPT1YFL038C ASP3-4P0CX79 362 aa6.79□□□□□ -1.32
YPT1YFL038C ASP3-1P0CZ17 362 aa6.79□□□□□ -1.32
YPT1YFL038C CDC24P11433 854 aaPredicted RBP6.79□□□□□ -1.32
YPT1YFL038C RNA1P11745 407 aaKnown RBP6.79□□□□□ -1.32
YPT1YFL038C SKG6P32900 734 aaPredicted RBP6.79□□□□□ -1.32
YPT1YFL038C MRP4P32902 394 aa6.79□□□□□ -1.32
YPT1YFL038C VID24P38263 362 aa6.79□□□□□ -1.32
YPT1YFL038C SWC5P38326 303 aa6.79□□□□□ -1.32
YPT1YFL038C GUA1P38625 525 aaKnown RBP6.79□□□□□ -1.32
YPT1YFL038C RIX1P38883 763 aaPredicted RBP6.79□□□□□ -1.32
YPT1YFL038C ZAP1P47043 880 aa6.79□□□□□ -1.32
YPT1YFL038C RSM26P47141 266 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms