RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W PHR1P05066 565 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
SMC1YFL008W HMG1P12683 1054 aa1.65□□□□□ -2.14
SMC1YFL008W CYS3P31373 394 aaKnown RBP1.65□□□□□ -2.14
SMC1YFL008W TRM2P33753 639 aa1.65□□□□□ -2.14
SMC1YFL008W SPC42P36094 363 aa1.65□□□□□ -2.14
SMC1YFL008W POA1P38218 177 aa1.65□□□□□ -2.14
SMC1YFL008W QRI1P43123 477 aaKnown RBP1.65□□□□□ -2.14
SMC1YFL008W IES1P43579 692 aa1.65□□□□□ -2.14
SMC1YFL008W YJL163CP46996 555 aa1.65□□□□□ -2.14
SMC1YFL008W HSV2P50079 448 aaPredicted RBP1.65□□□□□ -2.14
SMC1YFL008W YNR029CP53729 429 aaKnown RBP1.65□□□□□ -2.14
SMC1YFL008W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
SMC1YFL008W YPS7Q06325 596 aa1.65□□□□□ -2.14
SMC1YFL008W WRS1Q12109 432 aaKnown RBP1.65□□□□□ -2.14
SMC1YFL008W TAF3Q12297 353 aa1.65□□□□□ -2.14
SMC1YFL008W TRM11Q12463 433 aa1.65□□□□□ -2.14
SMC1YFL008W KIN2P13186 1147 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W PER1P25625 357 aa1.65□□□□□ -2.15
SMC1YFL008W RRP14P36080 434 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W FAT1P38225 669 aa1.65□□□□□ -2.15
SMC1YFL008W FMO1P38866 432 aa1.65□□□□□ -2.15
SMC1YFL008W GPP1P41277 250 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W UBC11P52492 156 aa1.65□□□□□ -2.15
SMC1YFL008W MCM6P53091 1017 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W CDC53Q12018 815 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W MLH3Q12083 715 aa1.65□□□□□ -2.15
SMC1YFL008W YOR022CQ12204 715 aa1.65□□□□□ -2.15
SMC1YFL008W ADE8P04161 214 aa1.65□□□□□ -2.15
SMC1YFL008W RPS21AP0C0V8 87 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W ATP12P22135 325 aa1.65□□□□□ -2.15
SMC1YFL008W HCM1P25364 564 aa1.65□□□□□ -2.15
SMC1YFL008W VBA3P25594 458 aa1.65□□□□□ -2.15
SMC1YFL008W EFT1P32324 842 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W MF(ALPHA)2P32435 120 aa1.65□□□□□ -2.15
SMC1YFL008W HOG1P32485 435 aa1.65□□□□□ -2.15
SMC1YFL008W YHR078WP38799 552 aa1.65□□□□□ -2.15
SMC1YFL008W ECM1P39715 212 aa1.65□□□□□ -2.15
SMC1YFL008W RLP7P40693 322 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W YJR142WP47173 342 aa1.65□□□□□ -2.15
SMC1YFL008W MSE1P48525 536 aa1.65□□□□□ -2.15
SMC1YFL008W ECM9Q02202 377 aa1.65□□□□□ -2.15
SMC1YFL008W TMN2Q04562 672 aa1.65□□□□□ -2.15
SMC1YFL008W SPO75Q07798 868 aa1.65□□□□□ -2.15
SMC1YFL008W MLP1Q02455 1875 aaKnown RBP1.65□□□□□ -2.15
SMC1YFL008W YLR415CO13578 112 aa1.64□□□□□ -2.15
SMC1YFL008W ARE1P25628 610 aa1.64□□□□□ -2.15
SMC1YFL008W AAR2P32357 355 aaPredicted RBP1.64□□□□□ -2.15
SMC1YFL008W YEL1P34225 687 aa1.64□□□□□ -2.15
SMC1YFL008W BCD1P38772 366 aa1.64□□□□□ -2.15
SMC1YFL008W NOP9P47077 666 aaKnown RBP1.64□□□□□ -2.15
SMC1YFL008W MTL1P53214 551 aa1.64□□□□□ -2.15
SMC1YFL008W RNH70P53331 553 aa1.64□□□□□ -2.15
SMC1YFL008W YNL193WP53870 558 aa1.64□□□□□ -2.15
SMC1YFL008W THI22Q06490 572 aa1.64□□□□□ -2.15
SMC1YFL008W STP4Q07351 490 aa1.64□□□□□ -2.15
SMC1YFL008W APM4Q99186 491 aa1.64□□□□□ -2.15
SMC1YFL008W ERG4P25340 473 aa1.64□□□□□ -2.15
SMC1YFL008W GRX4P32642 244 aa1.64□□□□□ -2.15
SMC1YFL008W SER1P33330 395 aaKnown RBP1.64□□□□□ -2.15
SMC1YFL008W SET3P36124 751 aa1.64□□□□□ -2.15
SMC1YFL008W MIT1P40002 666 aa1.64□□□□□ -2.15
SMC1YFL008W YIL108WP40483 696 aaKnown RBP1.64□□□□□ -2.15
SMC1YFL008W SNP1Q00916 300 aaPredicted RBP1.64□□□□□ -2.15
SMC1YFL008W RPS15Q01855 142 aaKnown RBP1.64□□□□□ -2.15
SMC1YFL008W RSB1Q08417 382 aa1.64□□□□□ -2.15
SMC1YFL008W PPR1P07272 904 aaPredicted RBP1.64□□□□□ -2.15
SMC1YFL008W YPT10P38146 199 aa1.64□□□□□ -2.15
SMC1YFL008W MAL31P38156 614 aa1.64□□□□□ -2.15
SMC1YFL008W PUS4P48567 403 aaKnown RBP1.64□□□□□ -2.15
SMC1YFL008W AIM14P53109 570 aa1.64□□□□□ -2.15
SMC1YFL008W PMD1P32634 1753 aa1.64□□□□□ -2.15
SMC1YFL008W PHO8P11491 566 aa1.63□□□□□ -2.15
SMC1YFL008W SFL1P20134 766 aa1.63□□□□□ -2.15
SMC1YFL008W CEP3P40969 608 aa1.63□□□□□ -2.15
SMC1YFL008W RPS21BQ3E754 87 aaKnown RBP1.63□□□□□ -2.15
SMC1YFL008W NOP14Q99207 810 aaKnown RBP1.63□□□□□ -2.15
SMC1YFL008W TAD3Q9URQ3 322 aa1.63□□□□□ -2.15
SMC1YFL008W SWI6P09959 803 aa1.63□□□□□ -2.15
SMC1YFL008W RAD18P10862 487 aa1.63□□□□□ -2.15
SMC1YFL008W PPS1P38148 807 aa1.63□□□□□ -2.15
SMC1YFL008W UBP12P39538 1254 aa1.63□□□□□ -2.15
SMC1YFL008W SDS3P40505 327 aa1.63□□□□□ -2.15
SMC1YFL008W SSY5P47002 699 aa1.63□□□□□ -2.15
SMC1YFL008W PBP1P53297 722 aaKnown RBP1.63□□□□□ -2.15
SMC1YFL008W NOG2P53742 486 aaKnown RBP1.63□□□□□ -2.15
SMC1YFL008W IRC13Q08630 104 aa1.63□□□□□ -2.15
SMC1YFL008W ARR3Q06598 404 aa1.63□□□□□ -2.15
SMC1YFL008W HFI1Q12060 488 aa1.63□□□□□ -2.15
SMC1YFL008W LAT1P12695 482 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W PFK1P16861 987 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W THR1P17423 357 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W APL2P36000 726 aaPredicted RBP1.62□□□□□ -2.15
SMC1YFL008W GEX2P36173 615 aa1.62□□□□□ -2.15
SMC1YFL008W RRP8P38961 392 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W YNL195CP40168 261 aa1.62□□□□□ -2.15
SMC1YFL008W BUD8P41698 603 aa1.62□□□□□ -2.15
SMC1YFL008W STB4P50104 949 aa1.62□□□□□ -2.15
SMC1YFL008W DAM1P53267 343 aa1.62□□□□□ -2.15
SMC1YFL008W SMX3P54999 86 aaPredicted RBP1.62□□□□□ -2.15
SMC1YFL008W MTQ2Q03920 221 aaPredicted RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms