RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W ECM30Q06673 1274 aa8.29□□□□□ -1.08
SHC1YER096W SPO21Q12411 609 aa8.29□□□□□ -1.08
SHC1YER096W LDB19Q12502 818 aa8.29□□□□□ -1.08
SHC1YER096W YLR462WO13556 202 aa8.29□□□□□ -1.08
SHC1YER096W YER152CP10356 443 aa8.29□□□□□ -1.08
SHC1YER096W RSA4P25382 515 aaKnown RBP8.29□□□□□ -1.08
SHC1YER096W VBA3P25594 458 aa8.29□□□□□ -1.08
SHC1YER096W VBA5P36172 582 aa8.29□□□□□ -1.08
SHC1YER096W YHL049CP38722 271 aa8.29□□□□□ -1.08
SHC1YER096W TDA3P38758 523 aa8.29□□□□□ -1.08
SHC1YER096W YER189WP40104 122 aa8.29□□□□□ -1.08
SHC1YER096W YFL064CP43540 174 aa8.29□□□□□ -1.08
SHC1YER096W SLG1P54867 378 aa8.29□□□□□ -1.08
SHC1YER096W YOR059CQ08448 450 aaKnown RBP8.29□□□□□ -1.08
SHC1YER096W YBL111CQ3E7Y5 667 aa8.29□□□□□ -1.08
SHC1YER096W CIT2P08679 460 aa8.28□□□□□ -1.08
SHC1YER096W FUB1P25659 250 aa8.28□□□□□ -1.08
SHC1YER096W EFB1P32471 206 aaKnown RBP8.28□□□□□ -1.08
SHC1YER096W GCG1P32656 232 aaKnown RBP8.28□□□□□ -1.08
SHC1YER096W QNS1P38795 714 aaKnown RBP8.28□□□□□ -1.08
SHC1YER096W PSY2P40164 858 aa8.28□□□□□ -1.08
SHC1YER096W JJJ1P53863 590 aa8.28□□□□□ -1.08
SHC1YER096W UFO1Q04511 668 aa8.28□□□□□ -1.08
SHC1YER096W TDA9Q04545 1251 aa8.28□□□□□ -1.08
SHC1YER096W ECI1Q05871 280 aa8.28□□□□□ -1.08
SHC1YER096W DNL4Q08387 944 aaPredicted RBP8.28□□□□□ -1.08
SHC1YER096W RAD10P06838 210 aa8.27□□□□□ -1.09
SHC1YER096W RPO26P20435 155 aa8.27□□□□□ -1.09
SHC1YER096W VMA4P22203 233 aaKnown RBP8.27□□□□□ -1.09
SHC1YER096W CYS3P31373 394 aaKnown RBP8.27□□□□□ -1.09
SHC1YER096W DBF4P32325 704 aa8.27□□□□□ -1.09
SHC1YER096W ABZ1P37254 787 aaPredicted RBP8.27□□□□□ -1.09
SHC1YER096W TBS1P38114 1094 aa8.27□□□□□ -1.09
SHC1YER096W BRL1P38770 471 aa8.27□□□□□ -1.09
SHC1YER096W CCT4P39078 528 aaKnown RBP8.27□□□□□ -1.09
SHC1YER096W TMN3P40071 706 aa8.27□□□□□ -1.09
SHC1YER096W RPT2P40327 437 aaKnown RBP8.27□□□□□ -1.09
SHC1YER096W SPP1Q03012 353 aa8.27□□□□□ -1.09
SHC1YER096W YPL034WQ03083 165 aa8.27□□□□□ -1.09
SHC1YER096W VTI1Q04338 217 aa8.27□□□□□ -1.09
SHC1YER096W PIB1Q06651 286 aa8.27□□□□□ -1.09
SHC1YER096W TRE1Q08919 783 aa8.27□□□□□ -1.09
SHC1YER096W VPS54Q12071 889 aa8.27□□□□□ -1.09
SHC1YER096W NOP58Q12499 511 aaKnown RBP8.27□□□□□ -1.09
SHC1YER096W HEM1P09950 548 aaPredicted RBP8.26□□□□□ -1.09
SHC1YER096W YBL036CP38197 257 aa8.26□□□□□ -1.09
SHC1YER096W YNL320WP42840 284 aa8.26□□□□□ -1.09
SHC1YER096W MND1P53102 219 aa8.26□□□□□ -1.09
SHC1YER096W YGR035CP53222 116 aa8.26□□□□□ -1.09
SHC1YER096W SPC98P53540 846 aa8.26□□□□□ -1.09
SHC1YER096W MZM1Q03429 123 aaPredicted RBP8.26□□□□□ -1.09
SHC1YER096W ATG16Q03818 150 aa8.26□□□□□ -1.09
SHC1YER096W ARO80Q04052 950 aa8.26□□□□□ -1.09
SHC1YER096W MAG2Q06436 670 aaKnown RBP8.26□□□□□ -1.09
SHC1YER096W EMP46Q12396 444 aa8.26□□□□□ -1.09
SHC1YER096W TPK1P06244 397 aa8.25□□□□□ -1.09
SHC1YER096W ADE3P07245 946 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W PRP9P19736 530 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W MRM1P25270 412 aa8.25□□□□□ -1.09
SHC1YER096W PUF4P25339 888 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SHC1YER096W GCD6P32501 712 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W PEX2P32800 271 aa8.25□□□□□ -1.09
SHC1YER096W YBL055CP34220 418 aaPredicted RBP8.25□□□□□ -1.09
SHC1YER096W BYE1P36106 594 aa8.25□□□□□ -1.09
SHC1YER096W GRS1P38088 690 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W SLX1P38324 304 aa8.25□□□□□ -1.09
SHC1YER096W END3P39013 349 aa8.25□□□□□ -1.09
SHC1YER096W GEM1P39722 662 aa8.25□□□□□ -1.09
SHC1YER096W DSE1P40077 573 aa8.25□□□□□ -1.09
SHC1YER096W ESL1P40456 1118 aa8.25□□□□□ -1.09
SHC1YER096W MAD1P40957 749 aa8.25□□□□□ -1.09
SHC1YER096W MIC19P43594 170 aa8.25□□□□□ -1.09
SHC1YER096W YJR054WP47114 497 aa8.25□□□□□ -1.09
SHC1YER096W NOG2P53742 486 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W STP1Q00947 519 aa8.25□□□□□ -1.09
SHC1YER096W MUB1Q03162 620 aa8.25□□□□□ -1.09
SHC1YER096W YMR187CQ03236 431 aa8.25□□□□□ -1.09
SHC1YER096W RCR2Q03446 210 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W DIS3Q08162 1001 aaKnown RBP8.25□□□□□ -1.09
SHC1YER096W GPI10P30777 616 aa8.24□□□□□ -1.09
SHC1YER096W ABD1P32783 436 aaPredicted RBP8.24□□□□□ -1.09
SHC1YER096W FRE1P32791 686 aa8.24□□□□□ -1.09
SHC1YER096W BUD2P33314 1104 aa8.24□□□□□ -1.09
SHC1YER096W SEG2P34250 1132 aa8.24□□□□□ -1.09
SHC1YER096W MMS21P38632 267 aa8.24□□□□□ -1.09
SHC1YER096W SPC72P39723 622 aa8.24□□□□□ -1.09
SHC1YER096W SIP5P40210 489 aaKnown RBP8.24□□□□□ -1.09
SHC1YER096W POL31P46957 487 aa8.24□□□□□ -1.09
SHC1YER096W NMD5P46970 1048 aa8.24□□□□□ -1.09
SHC1YER096W RPC17P47076 161 aa8.24□□□□□ -1.09
SHC1YER096W FOL2P51601 243 aaKnown RBP8.24□□□□□ -1.09
SHC1YER096W ALT2P52892 507 aa8.24□□□□□ -1.09
SHC1YER096W NOP6Q07623 225 aaKnown RBP8.24□□□□□ -1.09
SHC1YER096W AIM41Q12032 185 aa8.24□□□□□ -1.09
SHC1YER096W ZRT2Q12436 422 aa8.24□□□□□ -1.09
SHC1YER096W RRP1P35178 278 aaPredicted RBP8.24□□□□□ -1.09
SHC1YER096W YMC2P38087 329 aa8.24□□□□□ -1.09
SHC1YER096W SNZ3P43545 298 aa8.24□□□□□ -1.09
SHC1YER096W YGR130CP53278 816 aa8.24□□□□□ -1.09
SHC1YER096W SNZ2P53824 298 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms