RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeast

Gene RIB3, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB3	YDR487C	BTT1	P40314	149 aa	Predicted RBP	10.15	□□□□□ -0.78
RIB3	YDR487C	PPM1	Q04081	328 aa		10.15	□□□□□ -0.78
RIB3	YDR487C	SAM3	Q08986	587 aa		10.15	□□□□□ -0.78
RIB3	YDR487C	NOP4	P37838	685 aa	Known RBP	10.14	□□□□□ -0.79
RIB3	YDR487C	YBL036C	P38197	257 aa		10.14	□□□□□ -0.79
RIB3	YDR487C	GCN5	Q03330	439 aa		10.14	□□□□□ -0.79
RIB3	YDR487C	AI5_BETA	Q9ZZX0	354 aa		10.14	□□□□□ -0.79
RIB3	YDR487C	SCJ1	P25303	377 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	CSG2	P35206	410 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	BCH2	P36122	765 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	YKR051W	P36142	418 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	DUG2	P38149	878 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	YTA12	P40341	825 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	ZAP1	P47043	880 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	YGL036W	P53185	909 aa	Predicted RBP	10.13	□□□□□ -0.79
RIB3	YDR487C	KRE33	P53914	1056 aa	Known RBP	10.13	□□□□□ -0.79
RIB3	YDR487C	SFB2	P53953	876 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	TMA16	Q08687	178 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	NDJ1	Q12366	352 aa		10.13	□□□□□ -0.79
RIB3	YDR487C	SAT4	P25333	603 aa	Known RBP	10.12	□□□□□ -0.79
RIB3	YDR487C	RAD16	P31244	790 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	XRS2	P33301	854 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	NIP100	P33420	868 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	PSY4	P38193	441 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	MIP6	P38760	659 aa	Known RBP	10.12	□□□□□ -0.79
RIB3	YDR487C	RAD55	P38953	406 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	IES1	P43579	692 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	MND1	P53102	219 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	CEG1	Q01159	459 aa	Predicted RBP	10.12	□□□□□ -0.79
RIB3	YDR487C	MTD1	Q02046	320 aa	Known RBP	10.12	□□□□□ -0.79
RIB3	YDR487C	YPQ1	Q12010	308 aa		10.12	□□□□□ -0.79
RIB3	YDR487C	HIS5	P07172	385 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	MTF1	P14908	341 aa	Known RBP	10.11	□□□□□ -0.79
RIB3	YDR487C	ATE1	P16639	503 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	MSH3	P25336	1018 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	SAP190	P36123	1033 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	PFD1	P46988	109 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	GPD1	Q00055	391 aa	Known RBP	10.11	□□□□□ -0.79
RIB3	YDR487C	YHM2	Q04013	314 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	YML082W	Q04533	649 aa	Known RBP	10.11	□□□□□ -0.79
RIB3	YDR487C	TRE1	Q08919	783 aa		10.11	□□□□□ -0.79
RIB3	YDR487C	CWC2	Q12046	339 aa	Predicted RBP	10.11	□□□□□ -0.79
RIB3	YDR487C	PDH1	Q12428	516 aa	Known RBP	10.11	□□□□□ -0.79
RIB3	YDR487C	RPS14A	P06367	137 aa	Known RBP	10.1	□□□□□ -0.79
RIB3	YDR487C	STE11	P23561	717 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	HXT5	P38695	592 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	DYS1	P38791	387 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	RPS14B	P39516	138 aa	Known RBP	10.1	□□□□□ -0.79
RIB3	YDR487C	NUP60	P39705	539 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	AVT2	P39981	480 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	GUF1	P46943	645 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	VTC4	P47075	721 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	DDC1	Q08949	612 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	NBP2	Q12163	236 aa		10.1	□□□□□ -0.79
RIB3	YDR487C	TOR2	P32600	2474 aa	Known RBP	10.09	□□□□□ -0.79
RIB3	YDR487C	JIP3	O13555	125 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	CDC33	P07260	213 aa	Known RBP	10.09	□□□□□ -0.79
RIB3	YDR487C	SIR1	P21691	654 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	PPH22	P23595	377 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	SPT5	P27692	1063 aa	Known RBP	10.09	□□□□□ -0.79
RIB3	YDR487C	DAL1	P32375	460 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	SMC1	P32908	1225 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	POL12	P38121	705 aa	Predicted RBP	10.09	□□□□□ -0.79
RIB3	YDR487C	YBR225W	P38321	900 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	ARP1	P38696	384 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	MED6	P38782	295 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	CDC1	P40986	491 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	BSP1	Q06604	576 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	NSE1	Q07913	336 aa		10.09	□□□□□ -0.79
RIB3	YDR487C	TRP2	P00899	507 aa	Known RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	PPR1	P07272	904 aa	Predicted RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	RPS6A	P0CX37	236 aa	Known RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	RPS6B	P0CX38	236 aa	Predicted RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	YER152C	P10356	443 aa		10.08	□□□□□ -0.8
RIB3	YDR487C	SEG2	P34250	1132 aa		10.08	□□□□□ -0.8
RIB3	YDR487C	YMC2	P38087	329 aa		10.08	□□□□□ -0.8
RIB3	YDR487C	ARL1	P38116	183 aa	Known RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	ESBP6	P53918	673 aa		10.08	□□□□□ -0.8
RIB3	YDR487C	ECM22	Q05958	814 aa	Predicted RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	YPR078C	Q06813	372 aa		10.08	□□□□□ -0.8
RIB3	YDR487C	RCL1	Q08096	367 aa	Predicted RBP	10.08	□□□□□ -0.8
RIB3	YDR487C	FUS1	P11710	512 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	VMA4	P22203	233 aa	Known RBP	10.07	□□□□□ -0.8
RIB3	YDR487C	SEC65	P29478	273 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	ISF1	P32488	338 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	FHL1	P39521	936 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	RPT2	P40327	437 aa	Known RBP	10.07	□□□□□ -0.8
RIB3	YDR487C	SDS3	P40505	327 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	TFG2	P41896	400 aa	Predicted RBP	10.07	□□□□□ -0.8
RIB3	YDR487C	VPS70	P47161	811 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	TUB4	P53378	473 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	SSL2	Q00578	843 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	VPS54	Q12071	889 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	CCH1	P50077	2039 aa		10.07	□□□□□ -0.8
RIB3	YDR487C	SIS1	P25294	352 aa	Known RBP	10.06	□□□□□ -0.8
RIB3	YDR487C	IME2	P32581	645 aa		10.06	□□□□□ -0.8
RIB3	YDR487C	DSS4	P32601	143 aa		10.06	□□□□□ -0.8
RIB3	YDR487C	SHM1	P37292	490 aa	Predicted RBP	10.06	□□□□□ -0.8
RIB3	YDR487C	CBR1	P38626	284 aa	Known RBP	10.06	□□□□□ -0.8
RIB3	YDR487C	YIL161W	P40449	235 aa	Known RBP	10.06	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms