RNA–Protein interactions for RNA: YDR479C

PEX29, Transcript of Peroxisomal integral membrane peroxin, yeast

Gene PEX29, Length 1,665 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX29	YDR479C	HSM3	P38348	480 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	SET5	P38890	526 aa	Known RBP	4.97	□□□□□ -1.61
PEX29	YDR479C	SAK1	P38990	1142 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	COP1	P53622	1201 aa	Known RBP	4.97	□□□□□ -1.61
PEX29	YDR479C	FAR11	P53917	953 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	RPM2	Q02773	1202 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	LGE1	Q02796	332 aa	Known RBP	4.97	□□□□□ -1.61
PEX29	YDR479C	YMR111C	Q04461	462 aa	Predicted RBP	4.97	□□□□□ -1.61
PEX29	YDR479C	GTB1	Q04924	702 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	DON1	Q05610	365 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	ECI1	Q05871	280 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	DAS2	Q12084	232 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	SPO21	Q12411	609 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	WHI5	Q12416	295 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	DPH6	Q12429	685 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	TUS1	Q06412	1307 aa		4.97	□□□□□ -1.61
PEX29	YDR479C	PRP9	P19736	530 aa	Known RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	OPI1	P21957	404 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	ITR2	P30606	609 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	EFT1	P32324	842 aa	Known RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected
PEX29	YDR479C	YBL055C	P34220	418 aa	Predicted RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	AST1	P35183	429 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	YKR015C	P36111	568 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	JNM1	P36224	373 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	ALG5	P40350	334 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	JEM1	P40358	645 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	QDR2	P40474	542 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	IRR1	P40541	1150 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	ROG3	P43602	733 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	NOP9	P47077	666 aa	Known RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	NOP15	P53927	220 aa	Predicted RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	RCF1	Q03713	159 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	YDR341C	Q05506	607 aa	Known RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	VIP1	Q06685	1146 aa	Known RBP	4.96	□□□□□ -1.61
PEX29	YDR479C	SIL1	Q08199	421 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	GET4	Q12125	312 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	RUP1	Q12242	671 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	ZRT2	Q12436	422 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	YOR111W	Q99210	232 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	FRT1	Q99332	602 aa		4.96	□□□□□ -1.61
PEX29	YDR479C	SSK22	P25390	1331 aa	Predicted RBP	4.96	□□□□□ -1.62
PEX29	YDR479C	YAK1	P14680	807 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	VMA2	P16140	517 aa	Known RBP	4.96	□□□□□ -1.62
PEX29	YDR479C	CNA1	P23287	553 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	CLB2	P24869	491 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	RRN6	P32786	894 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	GRX7	P38068	203 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	MUM2	P38236	366 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	YLF2	P38746	405 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	VMA22	P38784	181 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	SSZ1	P38788	538 aa	Known RBP	4.96	□□□□□ -1.62
PEX29	YDR479C	YGL176C	P46945	554 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	POL31	P46957	487 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	FMP33	P46998	180 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	RFX1	P48743	811 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	UBP15	P50101	1230 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	CPR6	P53691	371 aa	Known RBP	4.96	□□□□□ -1.62
PEX29	YDR479C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PEX29	YDR479C	PSR2	Q07949	397 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	GET3	Q12154	354 aa	Known RBP	4.96	□□□□□ -1.62
PEX29	YDR479C	PHM7	Q12252	991 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	SEY1	Q99287	776 aa		4.96	□□□□□ -1.62
PEX29	YDR479C	ADR1	P07248	1323 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	REP1	P03871	373 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	LEU1	P07264	779 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	CLN3	P13365	580 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	RSR1	P13856	272 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	GCN3	P14741	305 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	SEC63	P14906	663 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	POL3	P15436	1097 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	URA4	P20051	364 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	UBA1	P22515	1024 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	MCM3	P24279	971 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	YKR078W	P36158	585 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
PEX29	YDR479C	PCF11	P39081	626 aa	Predicted RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	SGM1	P47166	707 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	ECL1	P48235	211 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	SUT1	P53032	299 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	MTO1	P53070	669 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	YGR054W	P53235	642 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	TY1A-MR1	Q04215	440 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	ATG13	Q06628	738 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	YOL075C	Q08234	1294 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	RPN8	Q08723	338 aa	Known RBP	4.95	□□□□□ -1.62
PEX29	YDR479C	TAF3	Q12297	353 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	SCM3	Q12334	223 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	PTC5	Q12511	572 aa		4.95	□□□□□ -1.62
PEX29	YDR479C	SEM1	O94742	89 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	CCP1	P00431	361 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	HIS3	P06633	220 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	YME1	P32795	747 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	NIP100	P33420	868 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	MCD4	P36051	919 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	RFC3	P38629	340 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	YHL050C	P38721	697 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	YHR219W	P38900	624 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	AKR1	P39010	764 aa		4.94	□□□□□ -1.62
PEX29	YDR479C	SPC72	P39723	622 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms