RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	YPR027C	Q12079	277 aa		5.76	□□□□□ -1.49
NSE3	YDR288W	ATG11	Q12527	1178 aa		5.76	□□□□□ -1.49
NSE3	YDR288W	KAR1	P11927	433 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	LAT1	P12695	482 aa	Known RBP	5.75	□□□□□ -1.49
NSE3	YDR288W	ERG4	P25340	473 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	DAL3	P32459	195 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	YKL222C	P35995	705 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	OAF3	P36023	863 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	KTR4	P38131	464 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	BEM4	P39011	633 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	GIP4	P39732	760 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	RNR4	P49723	345 aa	Known RBP	5.75	□□□□□ -1.49
NSE3	YDR288W	COG6	P53959	839 aa		5.75	□□□□□ -1.49
NSE3	YDR288W	SWI6	P09959	803 aa		5.74	□□□□□ -1.49
NSE3	YDR288W	RPS21A	P0C0V8	87 aa	Known RBP	5.74	□□□□□ -1.49
NSE3	YDR288W	RNR1	P21524	888 aa	Known RBP	5.74	□□□□□ -1.49
NSE3	YDR288W	IMG2	P25642	146 aa	Predicted RBP	5.74	□□□□□ -1.49
NSE3	YDR288W	TFC4	P33339	1025 aa		5.74	□□□□□ -1.49
NSE3	YDR288W	SUL1	P38359	859 aa		5.74	□□□□□ -1.49
NSE3	YDR288W	DUN1	P39009	513 aa		5.74	□□□□□ -1.49
NSE3	YDR288W	GPP2	P40106	250 aa	Known RBP	5.74	□□□□□ -1.49
NSE3	YDR288W	RNT1	Q02555	471 aa		5.74	□□□□□ -1.49
NSE3	YDR288W	SKY1	Q03656	742 aa		5.74	□□□□□ -1.49
NSE3	YDR288W	ERG20	P08524	352 aa	Known RBP	5.73	□□□□□ -1.49
NSE3	YDR288W	HCA4	P20448	770 aa	Known RBP	5.73	□□□□□ -1.49
NSE3	YDR288W	SEC15	P22224	910 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	PMI40	P29952	429 aa	Known RBP	5.73	□□□□□ -1.49
NSE3	YDR288W	YKU70	P32807	602 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	HIS7	P33734	552 aa	Known RBP	5.73	□□□□□ -1.49
NSE3	YDR288W	TRM2	P33753	639 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	DEF1	P35732	738 aa	Known RBP	5.73	□□□□□ -1.49
NSE3	YDR288W	BIT2	P38346	545 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	GID8	P40208	455 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	TAF1	P46677	1066 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	NIT2	P47016	307 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	SLD3	P53135	668 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	NOP15	P53927	220 aa	Predicted RBP	5.73	□□□□□ -1.49
NSE3	YDR288W	FRE5	Q08908	694 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	APM4	Q99186	491 aa		5.73	□□□□□ -1.49
NSE3	YDR288W	RPS17A	P02407	136 aa	Known RBP	5.72	□□□□□ -1.49
NSE3	YDR288W	RPS17B	P14127	136 aa	Known RBP	5.72	□□□□□ -1.49
NSE3	YDR288W	PET127	P32606	800 aa		5.72	□□□□□ -1.49
NSE3	YDR288W	EMP65	P40085	556 aa		5.72	□□□□□ -1.49
NSE3	YDR288W	YNL195C	P40168	261 aa		5.72	□□□□□ -1.49
NSE3	YDR288W	MTL1	P53214	551 aa		5.72	□□□□□ -1.49
NSE3	YDR288W	VBA4	Q04602	768 aa	Known RBP	5.72	□□□□□ -1.49
NSE3	YDR288W	ECM3	Q99252	613 aa		5.72	□□□□□ -1.49
NSE3	YDR288W	ALG7	P07286	448 aa		5.71	□□□□□ -1.5
NSE3	YDR288W	GLN4	P13188	809 aa	Known RBP	5.71	□□□□□ -1.5
NSE3	YDR288W	FRS1	P15624	595 aa	Known RBP	5.71	□□□□□ -1.5
NSE3	YDR288W	COX11	P19516	300 aa	Known RBP	5.71	□□□□□ -1.5
NSE3	YDR288W	FAT1	P38225	669 aa		5.71	□□□□□ -1.5
NSE3	YDR288W	BUL1	P48524	976 aa		5.71	□□□□□ -1.5
NSE3	YDR288W	TMA7	Q3E764	64 aa	Known RBP	5.71	□□□□□ -1.5
NSE3	YDR288W	TUB2	P02557	457 aa	Known RBP	5.7	□□□□□ -1.5
NSE3	YDR288W	RPS9B	P05755	195 aa	Known RBP	5.7	□□□□□ -1.5
NSE3	YDR288W	ERG6	P25087	383 aa	Known RBP	5.7	□□□□□ -1.5
NSE3	YDR288W	DGR2	P32330	852 aa		5.7	□□□□□ -1.5
NSE3	YDR288W	MVD1	P32377	396 aa	Known RBP	5.7	□□□□□ -1.5
NSE3	YDR288W	PLC1	P32383	869 aa		5.7	□□□□□ -1.5
NSE3	YDR288W	YBR053C	P38235	358 aa		5.7	□□□□□ -1.5
NSE3	YDR288W	REV7	P38927	245 aa		5.7	□□□□□ -1.5
NSE3	YDR288W	VID28	P40547	921 aa		5.7	□□□□□ -1.5
NSE3	YDR288W	SND1	Q04007	877 aa		5.7	□□□□□ -1.5
NSE3	YDR288W	HRP1	Q99383	534 aa	Known RBP	5.7	□□□□□ -1.5
NSE3	YDR288W	CCT3	P39077	534 aa	Known RBP	5.69	□□□□□ -1.5
NSE3	YDR288W	NUP60	P39705	539 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	PEA2	P40091	420 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	HOS4	P40480	1083 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	PXA1	P41909	870 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	RSC8	P43609	557 aa	Known RBP	5.69	□□□□□ -1.5
NSE3	YDR288W	YJL163C	P46996	555 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	NOP9	P47077	666 aa	Known RBP	5.69	□□□□□ -1.5
NSE3	YDR288W	HMO1	Q03973	246 aa	Known RBP	5.69	□□□□□ -1.5
NSE3	YDR288W	YPS7	Q06325	596 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	YLR040C	Q07988	224 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	IRC13	Q08630	104 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	TRM13	Q12383	476 aa		5.69	□□□□□ -1.5
NSE3	YDR288W	PPR1	P07272	904 aa	Predicted RBP	5.68	□□□□□ -1.5
NSE3	YDR288W	PRP22	P24384	1145 aa	Known RBP	5.68	□□□□□ -1.5
NSE3	YDR288W	KIN82	P25341	720 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	YCR015C	P25616	317 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	ENP1	P38333	483 aa	Known RBP	5.68	□□□□□ -1.5
NSE3	YDR288W	BCD1	P38772	366 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	AIM21	P40563	679 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	BAP3	P41815	604 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	YJR008W	P47085	338 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	PEX8	P53248	589 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	PPN1	Q04119	674 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	PHM6	Q05637	104 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	ADY4	Q05955	493 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	VPS36	Q06696	566 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	YOL073C	Q08232	322 aa		5.68	□□□□□ -1.5
NSE3	YDR288W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
NSE3	YDR288W	PEX1	P24004	1043 aa		5.67	□□□□□ -1.5
NSE3	YDR288W	SER1	P33330	395 aa	Known RBP	5.67	□□□□□ -1.5
NSE3	YDR288W	FMO1	P38866	432 aa		5.67	□□□□□ -1.5
NSE3	YDR288W	LYS9	P38999	446 aa		5.67	□□□□□ -1.5
NSE3	YDR288W	GET2	P40056	285 aa		5.67	□□□□□ -1.5
NSE3	YDR288W	ENP2	P48234	707 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms