RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W CWC24P53769 259 aa1.77□□□□□ -2.13
PRP42YDR235W ARG5,6Q01217 863 aa1.77□□□□□ -2.13
PRP42YDR235W LAM4P38800 1345 aa1.76□□□□□ -2.13
PRP42YDR235W PRI2P20457 528 aa1.76□□□□□ -2.13
PRP42YDR235W AAD3P25612 363 aa1.76□□□□□ -2.13
PRP42YDR235W HEM3P28789 327 aa1.76□□□□□ -2.13
PRP42YDR235W PET10P36139 283 aa1.76□□□□□ -2.13
PRP42YDR235W APT2P36973 181 aa1.76□□□□□ -2.13
PRP42YDR235W SHR5P41912 237 aa1.76□□□□□ -2.13
PRP42YDR235W YDL086WQ07505 273 aa1.76□□□□□ -2.13
PRP42YDR235W PRS5Q12265 496 aaKnown RBP1.76□□□□□ -2.13
PRP42YDR235W TUP1P16649 713 aa1.75□□□□□ -2.13
PRP42YDR235W TSR4P25040 408 aa1.75□□□□□ -2.13
PRP42YDR235W ASF1P32447 279 aa1.75□□□□□ -2.13
PRP42YDR235W YHR097CP38809 366 aaKnown RBP1.75□□□□□ -2.13
PRP42YDR235W GET2P40056 285 aa1.75□□□□□ -2.13
PRP42YDR235W NMD5P46970 1048 aa1.75□□□□□ -2.13
PRP42YDR235W MCM21Q06675 368 aa1.75□□□□□ -2.13
PRP42YDR235W MSD1P15179 658 aaKnown RBP1.74□□□□□ -2.13
PRP42YDR235W SDS24P38314 527 aa1.74□□□□□ -2.13
PRP42YDR235W PMT6P42934 759 aa1.74□□□□□ -2.13
PRP42YDR235W YTH1Q06102 208 aaPredicted RBP1.74□□□□□ -2.13
PRP42YDR235W VPS36Q06696 566 aa1.74□□□□□ -2.13
PRP42YDR235W YBR182C-AQ8TGU6 64 aa1.74□□□□□ -2.13
PRP42YDR235W PEX1P24004 1043 aa1.73□□□□□ -2.13
PRP42YDR235W PEX6P33760 1030 aa1.73□□□□□ -2.13
PRP42YDR235W YEL1P34225 687 aa1.73□□□□□ -2.13
PRP42YDR235W SNO3P43544 222 aa1.73□□□□□ -2.13
PRP42YDR235W ZDS1P50111 915 aaKnown RBP1.73□□□□□ -2.13
PRP42YDR235W REH1Q06709 432 aa1.73□□□□□ -2.13
PRP42YDR235W MRPL9P31334 269 aa1.73□□□□□ -2.13
PRP42YDR235W EMC3P36039 253 aa1.73□□□□□ -2.13
PRP42YDR235W APL3P38065 1025 aa1.73□□□□□ -2.13
PRP42YDR235W DUN1P39009 513 aa1.73□□□□□ -2.13
PRP42YDR235W ALR2P43553 858 aa1.73□□□□□ -2.13
PRP42YDR235W RSC9Q03124 581 aa1.73□□□□□ -2.13
PRP42YDR235W YML020WQ03722 664 aa1.73□□□□□ -2.13
PRP42YDR235W DIF1O13577 133 aa1.72□□□□□ -2.13
PRP42YDR235W STE5P32917 917 aa1.72□□□□□ -2.13
PRP42YDR235W RLP7P40693 322 aaKnown RBP1.72□□□□□ -2.13
PRP42YDR235W ORC4P54791 529 aa1.72□□□□□ -2.13
PRP42YDR235W YDR179W-AQ03983 463 aa1.72□□□□□ -2.13
PRP42YDR235W NOP8Q08287 484 aaPredicted RBP1.72□□□□□ -2.13
PRP42YDR235W RNR1P21524 888 aaKnown RBP1.71□□□□□ -2.14
PRP42YDR235W PRP28P23394 588 aa1.71□□□□□ -2.14
PRP42YDR235W BCS1P32839 456 aa1.71□□□□□ -2.14
PRP42YDR235W PIG2P40187 538 aa1.71□□□□□ -2.14
PRP42YDR235W GYP8P43570 497 aa1.71□□□□□ -2.14
PRP42YDR235W ATG36P46983 293 aa1.71□□□□□ -2.14
PRP42YDR235W YGL117WP53133 265 aa1.71□□□□□ -2.14
PRP42YDR235W YGR283CP53336 341 aaPredicted RBP1.71□□□□□ -2.14
PRP42YDR235W NGL2Q03264 515 aaKnown RBP1.71□□□□□ -2.14
PRP42YDR235W YDR514CQ04408 483 aa1.71□□□□□ -2.14
PRP42YDR235W BUD7Q08754 746 aa1.71□□□□□ -2.14
PRP42YDR235W RKI1Q12189 258 aa1.71□□□□□ -2.14
PRP42YDR235W HBN1Q96VH4 193 aa1.71□□□□□ -2.14
PRP42YDR235W YPR089WO13585 888 aa1.7□□□□□ -2.14
PRP42YDR235W PHO2P07269 559 aa1.7□□□□□ -2.14
PRP42YDR235W RAD18P10862 487 aa1.7□□□□□ -2.14
PRP42YDR235W CTP1P38152 299 aa1.7□□□□□ -2.14
PRP42YDR235W BIT2P38346 545 aa1.7□□□□□ -2.14
PRP42YDR235W PFD1P46988 109 aa1.7□□□□□ -2.14
PRP42YDR235W REC102Q02721 264 aa1.7□□□□□ -2.14
PRP42YDR235W YSH1Q06224 779 aaPredicted RBP1.7□□□□□ -2.14
PRP42YDR235W DIA2Q08496 732 aaPredicted RBP1.7□□□□□ -2.14
PRP42YDR235W PIN2Q12057 282 aa1.7□□□□□ -2.14
PRP42YDR235W CHS5Q12114 671 aaKnown RBP1.7□□□□□ -2.14
PRP42YDR235W YOX1P34161 385 aa1.69□□□□□ -2.14
PRP42YDR235W YBR184WP38299 523 aa1.69□□□□□ -2.14
PRP42YDR235W MAD1P40957 749 aa1.69□□□□□ -2.14
PRP42YDR235W MPS3P47069 682 aa1.69□□□□□ -2.14
PRP42YDR235W CPR8P53728 308 aa1.69□□□□□ -2.14
PRP42YDR235W MGM1P32266 881 aa1.69□□□□□ -2.14
PRP42YDR235W NOP9P47077 666 aaKnown RBP1.69□□□□□ -2.14
PRP42YDR235W UTP8P53276 713 aaKnown RBP1.69□□□□□ -2.14
PRP42YDR235W AAT1Q01802 451 aa1.69□□□□□ -2.14
PRP42YDR235W HMO1Q03973 246 aaKnown RBP1.69□□□□□ -2.14
PRP42YDR235W SRL1Q08673 210 aa1.69□□□□□ -2.14
PRP42YDR235W HER1Q12276 1246 aa1.69□□□□□ -2.14
PRP42YDR235W YAP1P19880 650 aaKnown RBP1.68□□□□□ -2.14
PRP42YDR235W FLO5P38894 1075 aa1.68□□□□□ -2.14
PRP42YDR235W KHA1P40309 873 aa1.68□□□□□ -2.14
PRP42YDR235W HXT16P47185 567 aa1.68□□□□□ -2.14
PRP42YDR235W DIP5P53388 608 aa1.68□□□□□ -2.14
PRP42YDR235W IDP3P53982 420 aaKnown RBP1.68□□□□□ -2.14
PRP42YDR235W MRPL1Q04599 285 aa1.68□□□□□ -2.14
PRP42YDR235W ENT2Q05785 613 aa1.68□□□□□ -2.14
PRP42YDR235W THI22Q06490 572 aa1.68□□□□□ -2.14
PRP42YDR235W CRC1Q12289 327 aa1.68□□□□□ -2.14
PRP42YDR235W URE2P23202 354 aaKnown RBP1.67□□□□□ -2.14
PRP42YDR235W VBA3P25594 458 aa1.67□□□□□ -2.14
PRP42YDR235W SPF1P39986 1215 aaKnown RBP1.67□□□□□ -2.14
PRP42YDR235W UBP6P43593 499 aaKnown RBP1.67□□□□□ -2.14
PRP42YDR235W COX18P53239 316 aa1.67□□□□□ -2.14
PRP42YDR235W UFO1Q04511 668 aa1.67□□□□□ -2.14
PRP42YDR235W UBX5Q06682 500 aa1.67□□□□□ -2.14
PRP42YDR235W FMP25Q08023 583 aa1.67□□□□□ -2.14
PRP42YDR235W ECM3Q99252 613 aa1.67□□□□□ -2.14
PRP42YDR235W LEU2P04173 364 aaPredicted RBP1.66□□□□□ -2.14
PRP42YDR235W HEM1P09950 548 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms