RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C IMA5P40884 581 aa6.6□□□□□ -1.35
MSS116YDR194C ALT1P52893 592 aa6.6□□□□□ -1.35
MSS116YDR194C RRT6P53117 311 aaPredicted RBP6.6□□□□□ -1.35
MSS116YDR194C YLR407WQ06070 228 aa6.6□□□□□ -1.35
MSS116YDR194C HAL9Q12180 1030 aa6.6□□□□□ -1.35
MSS116YDR194C OSW2Q12202 724 aa6.6□□□□□ -1.35
MSS116YDR194C YKL050CP35736 922 aa6.6□□□□□ -1.35
MSS116YDR194C SDH1Q00711 640 aa6.6□□□□□ -1.35
MSS116YDR194C LEE1Q02799 301 aaKnown RBP6.6□□□□□ -1.35
MSS116YDR194C TRM8Q12009 286 aa6.6□□□□□ -1.35
MSS116YDR194C NUC1P08466 329 aa6.59□□□□□ -1.35
MSS116YDR194C UBC1P21734 215 aaKnown RBP6.59□□□□□ -1.35
MSS116YDR194C CMK1P27466 446 aaKnown RBP6.59□□□□□ -1.35
MSS116YDR194C RPD3P32561 433 aa6.59□□□□□ -1.35
MSS116YDR194C VMA8P32610 256 aaKnown RBP6.59□□□□□ -1.35
MSS116YDR194C ALG14P38242 237 aa6.59□□□□□ -1.35
MSS116YDR194C DSE4P53753 1117 aa6.59□□□□□ -1.35
MSS116YDR194C YKU80Q04437 629 aa6.59□□□□□ -1.35
MSS116YDR194C YEL076C-AP0CX16 216 aa6.58□□□□□ -1.36
MSS116YDR194C YLR464WP0CX17 216 aa6.58□□□□□ -1.36
MSS116YDR194C MCM3P24279 971 aaKnown RBP6.58□□□□□ -1.36
MSS116YDR194C MF(ALPHA)2P32435 120 aa6.58□□□□□ -1.36
MSS116YDR194C TYE7P33122 291 aaPredicted RBP6.58□□□□□ -1.36
MSS116YDR194C POA1P38218 177 aa6.58□□□□□ -1.36
MSS116YDR194C CEM1P39525 442 aa6.58□□□□□ -1.36
MSS116YDR194C YEL076CP39971 216 aa6.58□□□□□ -1.36
MSS116YDR194C SRC1Q03707 834 aa6.58□□□□□ -1.36
MSS116YDR194C TAF11Q04226 346 aa6.58□□□□□ -1.36
MSS116YDR194C VHS3Q08438 674 aa6.58□□□□□ -1.36
MSS116YDR194C RTK1Q12100 620 aaPredicted RBP6.58□□□□□ -1.36
MSS116YDR194C VAS1P07806 1104 aaKnown RBP6.58□□□□□ -1.36
MSS116YDR194C SPO16P17122 198 aa6.58□□□□□ -1.36
MSS116YDR194C YKR075CP36155 307 aa6.58□□□□□ -1.36
MSS116YDR194C AKL1P38080 1108 aaKnown RBP6.58□□□□□ -1.36
MSS116YDR194C MUM2P38236 366 aa6.58□□□□□ -1.36
MSS116YDR194C IFA38P38286 347 aa6.58□□□□□ -1.36
MSS116YDR194C STT3P39007 718 aaKnown RBP6.58□□□□□ -1.36
MSS116YDR194C MRPL19P53875 158 aa6.58□□□□□ -1.36
MSS116YDR194C TIM10P87108 93 aa6.58□□□□□ -1.36
MSS116YDR194C EAR1Q03212 550 aa6.58□□□□□ -1.36
MSS116YDR194C RGA2Q06407 1009 aa6.58□□□□□ -1.36
MSS116YDR194C HSH49Q99181 213 aaPredicted RBP6.58□□□□□ -1.36
MSS116YDR194C SEM1O94742 89 aa6.57□□□□□ -1.36
MSS116YDR194C LEU2P04173 364 aaPredicted RBP6.57□□□□□ -1.36
MSS116YDR194C CBP3P21560 335 aa6.57□□□□□ -1.36
MSS116YDR194C ECM32P32644 1121 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C NOP4P37838 685 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C APE4P38821 490 aa6.57□□□□□ -1.36
MSS116YDR194C YER010CP40011 234 aa6.57□□□□□ -1.36
MSS116YDR194C MAD2P40958 196 aa6.57□□□□□ -1.36
MSS116YDR194C IRC6P43615 237 aa6.57□□□□□ -1.36
MSS116YDR194C GPD1Q00055 391 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C YLR287CQ05881 355 aa6.57□□□□□ -1.36
MSS116YDR194C PHO5P00635 467 aa6.57□□□□□ -1.36
MSS116YDR194C GPM1P00950 247 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C RPS17AP02407 136 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C RPS17BP14127 136 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C RPT3P33298 428 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C PEX5P35056 612 aa6.57□□□□□ -1.36
MSS116YDR194C GPD2P41911 440 aaKnown RBP6.57□□□□□ -1.36
MSS116YDR194C CBK1P53894 756 aa6.57□□□□□ -1.36
MSS116YDR194C PSK2Q08217 1101 aa6.57□□□□□ -1.36
MSS116YDR194C TAH18Q12181 623 aa6.57□□□□□ -1.36
MSS116YDR194C HSP82P02829 709 aaKnown RBP6.56□□□□□ -1.36
MSS116YDR194C CDC16P09798 840 aa6.56□□□□□ -1.36
MSS116YDR194C RPS4AP0CX35 261 aaKnown RBP6.56□□□□□ -1.36
MSS116YDR194C RPS4BP0CX36 261 aaKnown RBP6.56□□□□□ -1.36
MSS116YDR194C DGR2P32330 852 aa6.56□□□□□ -1.36
MSS116YDR194C MDL2P33311 773 aa6.56□□□□□ -1.36
MSS116YDR194C CTF18P49956 741 aa6.56□□□□□ -1.36
MSS116YDR194C RAI1P53063 387 aaKnown RBP6.56□□□□□ -1.36
MSS116YDR194C DUS1P53759 423 aaKnown RBP6.56□□□□□ -1.36
MSS116YDR194C DIN7Q12086 430 aa6.56□□□□□ -1.36
MSS116YDR194C SVS1Q12254 260 aa6.56□□□□□ -1.36
MSS116YDR194C SAM35P14693 329 aa6.55□□□□□ -1.36
MSS116YDR194C DAL5P15365 543 aa6.55□□□□□ -1.36
MSS116YDR194C ACO1P19414 778 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
MSS116YDR194C PGS1P25578 521 aa6.55□□□□□ -1.36
MSS116YDR194C RAD16P31244 790 aa6.55□□□□□ -1.36
MSS116YDR194C YBR138CP38277 524 aa6.55□□□□□ -1.36
MSS116YDR194C MIP6P38760 659 aaKnown RBP6.55□□□□□ -1.36
MSS116YDR194C TPA1P40032 644 aaKnown RBP6.55□□□□□ -1.36
MSS116YDR194C PSF2P40359 213 aa6.55□□□□□ -1.36
MSS116YDR194C PUS2P53167 370 aa6.55□□□□□ -1.36
MSS116YDR194C YPS7Q06325 596 aa6.55□□□□□ -1.36
MSS116YDR194C RRG1Q12167 365 aaPredicted RBP6.55□□□□□ -1.36
MSS116YDR194C CLB4P24871 460 aa6.55□□□□□ -1.36
MSS116YDR194C SSL1Q04673 461 aaPredicted RBP6.55□□□□□ -1.36
MSS116YDR194C RVB2Q12464 471 aaKnown RBP6.55□□□□□ -1.36
MSS116YDR194C FUR1P18562 216 aaKnown RBP6.54□□□□□ -1.36
MSS116YDR194C IMG2P25642 146 aaPredicted RBP6.54□□□□□ -1.36
MSS116YDR194C CBF2P32504 956 aa6.54□□□□□ -1.36
MSS116YDR194C SSP120P39931 234 aaKnown RBP6.54□□□□□ -1.36
MSS116YDR194C MNT2P53059 558 aa6.54□□□□□ -1.36
MSS116YDR194C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
MSS116YDR194C YMR210WQ03649 449 aa6.54□□□□□ -1.36
MSS116YDR194C RCF1Q03713 159 aa6.54□□□□□ -1.36
MSS116YDR194C DBP10Q12389 995 aaKnown RBP6.54□□□□□ -1.36
MSS116YDR194C POL3P15436 1097 aa6.53□□□□□ -1.36
MSS116YDR194C TAF5P38129 798 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 116.1 ms