RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C NUC1P08466 329 aa2.03□□□□□ -2.08
MSH6YDR097C SWI6P09959 803 aa2.03□□□□□ -2.08
MSH6YDR097C PFK2P16862 959 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
MSH6YDR097C FUR1P18562 216 aaKnown RBP2.03□□□□□ -2.08
MSH6YDR097C PRE10P21242 288 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
MSH6YDR097C MCM10P32354 571 aa2.03□□□□□ -2.08
MSH6YDR097C FRD1P32614 470 aaKnown RBP2.03□□□□□ -2.08
MSH6YDR097C YKR018CP36114 725 aa2.03□□□□□ -2.08
MSH6YDR097C DUN1P39009 513 aa2.03□□□□□ -2.08
MSH6YDR097C YIL092WP40497 633 aa2.03□□□□□ -2.08
MSH6YDR097C ENV11P53246 860 aa2.03□□□□□ -2.08
MSH6YDR097C YDR338CQ05497 695 aa2.03□□□□□ -2.08
MSH6YDR097C BRE4Q07660 1125 aa2.03□□□□□ -2.08
MSH6YDR097C PSR2Q07949 397 aa2.03□□□□□ -2.08
MSH6YDR097C MDM38Q08179 573 aa2.03□□□□□ -2.08
MSH6YDR097C NSI1Q12457 570 aa2.03□□□□□ -2.08
MSH6YDR097C SNT1P25357 1226 aa2.03□□□□□ -2.09
MSH6YDR097C PET309P32522 965 aaPredicted RBP2.03□□□□□ -2.09
MSH6YDR097C SMY2P32909 740 aaKnown RBP2.03□□□□□ -2.09
MSH6YDR097C RRN3P36070 627 aa2.03□□□□□ -2.09
MSH6YDR097C ALG14P38242 237 aa2.03□□□□□ -2.09
MSH6YDR097C EAF5P39995 279 aa2.03□□□□□ -2.09
MSH6YDR097C GIP2P40036 548 aa2.03□□□□□ -2.09
MSH6YDR097C YJL045WP47052 634 aa2.03□□□□□ -2.09
MSH6YDR097C RNR4P49723 345 aaKnown RBP2.03□□□□□ -2.09
MSH6YDR097C YGR045CP53229 120 aa2.03□□□□□ -2.09
MSH6YDR097C MDR1P53258 950 aa2.03□□□□□ -2.09
MSH6YDR097C DSE4P53753 1117 aa2.03□□□□□ -2.09
MSH6YDR097C ERG5P54781 538 aa2.03□□□□□ -2.09
MSH6YDR097C SNP1Q00916 300 aaPredicted RBP2.03□□□□□ -2.09
MSH6YDR097C TRS130Q03660 1102 aa2.03□□□□□ -2.09
MSH6YDR097C BLS1Q06071 122 aa2.03□□□□□ -2.09
MSH6YDR097C RPN7Q06103 429 aaKnown RBP2.03□□□□□ -2.09
MSH6YDR097C YDR056CQ12025 205 aa2.03□□□□□ -2.09
MSH6YDR097C TY1A-NL1Q12391 440 aaKnown RBP2.03□□□□□ -2.09
MSH6YDR097C GPM1P00950 247 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C ERS1P17261 260 aa2.02□□□□□ -2.09
MSH6YDR097C IME1P21190 360 aa2.02□□□□□ -2.09
MSH6YDR097C STE14P32584 239 aa2.02□□□□□ -2.09
MSH6YDR097C AIM26P32858 118 aa2.02□□□□□ -2.09
MSH6YDR097C NNK1P36003 928 aa2.02□□□□□ -2.09
MSH6YDR097C PGM2P37012 569 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C BIT2P38346 545 aa2.02□□□□□ -2.09
MSH6YDR097C YHL041WP38730 149 aa2.02□□□□□ -2.09
MSH6YDR097C SSZ1P38788 538 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C LYS14P40971 790 aa2.02□□□□□ -2.09
MSH6YDR097C CCM1P48237 864 aaPredicted RBP2.02□□□□□ -2.09
MSH6YDR097C SLD3P53135 668 aa2.02□□□□□ -2.09
MSH6YDR097C YNR061CP53747 219 aa2.02□□□□□ -2.09
MSH6YDR097C CEG1Q01159 459 aaPredicted RBP2.02□□□□□ -2.09
MSH6YDR097C YML131WQ03102 365 aa2.02□□□□□ -2.09
MSH6YDR097C MSC2Q03455 724 aa2.02□□□□□ -2.09
MSH6YDR097C DOT1Q04089 582 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C NHX1Q04121 633 aa2.02□□□□□ -2.09
MSH6YDR097C MLC2Q06580 163 aa2.02□□□□□ -2.09
MSH6YDR097C CWC2Q12046 339 aaPredicted RBP2.02□□□□□ -2.09
MSH6YDR097C RRG1Q12167 365 aaPredicted RBP2.02□□□□□ -2.09
MSH6YDR097C FOB1O13329 566 aa2.02□□□□□ -2.09
MSH6YDR097C GLN4P13188 809 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C OPI1P21957 404 aa2.02□□□□□ -2.09
MSH6YDR097C SRO9P25567 434 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C MTC7P32633 139 aa2.02□□□□□ -2.09
MSH6YDR097C ACA1P39970 489 aa2.02□□□□□ -2.09
MSH6YDR097C YFL066CP43538 392 aa2.02□□□□□ -2.09
MSH6YDR097C CHA4P43634 648 aa2.02□□□□□ -2.09
MSH6YDR097C HLR1Q04429 423 aa2.02□□□□□ -2.09
MSH6YDR097C NEW1Q08972 1196 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C YOL114CQ12322 202 aa2.02□□□□□ -2.09
MSH6YDR097C PGA3Q12746 312 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C NUP192P47054 1683 aa2.02□□□□□ -2.09
MSH6YDR097C AI3P03877 415 aa2.02□□□□□ -2.09
MSH6YDR097C CMP2P14747 604 aa2.02□□□□□ -2.09
MSH6YDR097C SAN1P22470 610 aa2.02□□□□□ -2.09
MSH6YDR097C RAD16P31244 790 aa2.02□□□□□ -2.09
MSH6YDR097C SWI3P32591 825 aa2.02□□□□□ -2.09
MSH6YDR097C APL2P36000 726 aaPredicted RBP2.02□□□□□ -2.09
MSH6YDR097C MUD2P36084 527 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C MAL31P38156 614 aa2.02□□□□□ -2.09
MSH6YDR097C YHR033WP38690 423 aa2.02□□□□□ -2.09
MSH6YDR097C PIK1P39104 1066 aa2.02□□□□□ -2.09
MSH6YDR097C PEX7P39108 375 aa2.02□□□□□ -2.09
MSH6YDR097C ECM1P39715 212 aa2.02□□□□□ -2.09
MSH6YDR097C SAW1P39735 261 aa2.02□□□□□ -2.09
MSH6YDR097C AFG3P39925 761 aa2.02□□□□□ -2.09
MSH6YDR097C YER158CP40095 573 aa2.02□□□□□ -2.09
MSH6YDR097C PSF2P40359 213 aa2.02□□□□□ -2.09
MSH6YDR097C YIL108WP40483 696 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C BNA1P47096 177 aa2.02□□□□□ -2.09
MSH6YDR097C PCL10P53124 433 aa2.02□□□□□ -2.09
MSH6YDR097C SRT1Q03175 343 aa2.02□□□□□ -2.09
MSH6YDR097C SGO1Q08490 590 aa2.02□□□□□ -2.09
MSH6YDR097C IKI3Q06706 1349 aaKnown RBP2.02□□□□□ -2.09
MSH6YDR097C GEA1P47102 1408 aaPredicted RBP2.02□□□□□ -2.09
MSH6YDR097C MDJ1P35191 511 aa2.01□□□□□ -2.09
MSH6YDR097C DID4P36108 232 aa2.01□□□□□ -2.09
MSH6YDR097C ECM21P38167 1117 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C RET2P43621 546 aa2.01□□□□□ -2.09
MSH6YDR097C SIP4P46954 829 aa2.01□□□□□ -2.09
MSH6YDR097C UPF3P48412 387 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C RSC1P53236 928 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms