RNA–Protein interactions for RNA: YDL172C

YDL172C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL172C, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL172CYDL172C RET3P53600 189 aa6.42□□□□□ -1.38
YDL172CYDL172C CWC21Q03375 135 aaKnown RBP6.42□□□□□ -1.38
YDL172CYDL172C JIP5Q06214 492 aaPredicted RBP6.42□□□□□ -1.38
YDL172CYDL172C LEA1Q08963 238 aaPredicted RBP6.42□□□□□ -1.38
YDL172CYDL172C APM4Q99186 491 aa6.42□□□□□ -1.38
YDL172CYDL172C GIP4P39732 760 aa6.41□□□□□ -1.38
YDL172CYDL172C UBP5P39944 805 aa6.41□□□□□ -1.38
YDL172CYDL172C CHS6P40955 746 aa6.41□□□□□ -1.38
YDL172CYDL172C ENT3P47160 408 aa6.41□□□□□ -1.38
YDL172CYDL172C NCS2P53923 493 aaPredicted RBP6.41□□□□□ -1.38
YDL172CYDL172C YPQ2Q06328 317 aa6.41□□□□□ -1.38
YDL172CYDL172C LEU1P07264 779 aaKnown RBP6.4□□□□□ -1.38
YDL172CYDL172C DBP5P20449 482 aaKnown RBP6.4□□□□□ -1.38
YDL172CYDL172C PEP7P32609 515 aa6.4□□□□□ -1.38
YDL172CYDL172C BMH2P34730 273 aaKnown RBP6.4□□□□□ -1.38
YDL172CYDL172C BIM1P40013 344 aa6.4□□□□□ -1.38
YDL172CYDL172C FYV8P46949 817 aaKnown RBP6.4□□□□□ -1.38
YDL172CYDL172C VPS25P47142 202 aa6.4□□□□□ -1.38
YDL172CYDL172C GCN1P33892 2672 aaKnown RBP6.4□□□□□ -1.39
YDL172CYDL172C GAL80P04387 435 aa6.39□□□□□ -1.39
YDL172CYDL172C VPS3P23643 1011 aa6.39□□□□□ -1.39
YDL172CYDL172C VPS35P34110 944 aa6.39□□□□□ -1.39
YDL172CYDL172C TCD2P36101 447 aaKnown RBP6.39□□□□□ -1.39
YDL172CYDL172C GIP1P38229 639 aa6.39□□□□□ -1.39
YDL172CYDL172C ATG32P40458 529 aa6.39□□□□□ -1.39
YDL172CYDL172C ULP2P40537 1034 aaPredicted RBP6.39□□□□□ -1.39
YDL172CYDL172C IES1P43579 692 aa6.39□□□□□ -1.39
YDL172CYDL172C VTC2P43585 828 aa6.39□□□□□ -1.39
YDL172CYDL172C NMA2P53204 395 aa6.39□□□□□ -1.39
YDL172CYDL172C YNL108CP53929 270 aa6.39□□□□□ -1.39
YDL172CYDL172C MTF1P14908 341 aaKnown RBP6.38□□□□□ -1.39
YDL172CYDL172C THR4P16120 514 aaKnown RBP6.38□□□□□ -1.39
YDL172CYDL172C OPY1P38271 328 aa6.38□□□□□ -1.39
YDL172CYDL172C BTT1P40314 149 aaPredicted RBP6.38□□□□□ -1.39
YDL172CYDL172C POL31P46957 487 aa6.38□□□□□ -1.39
YDL172CYDL172C UTP8P53276 713 aaKnown RBP6.38□□□□□ -1.39
YDL172CYDL172C PGA2P53903 129 aa6.38□□□□□ -1.39
YDL172CYDL172C YAT1P80235 687 aa6.38□□□□□ -1.39
YDL172CYDL172C TRS130Q03660 1102 aa6.38□□□□□ -1.39
YDL172CYDL172C YLH47Q06493 454 aa6.38□□□□□ -1.39
YDL172CYDL172C SLK19Q08581 821 aaKnown RBP6.38□□□□□ -1.39
YDL172CYDL172C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
YDL172CYDL172C FLC1Q08967 793 aa6.38□□□□□ -1.39
YDL172CYDL172C CEX1Q12453 761 aa6.38□□□□□ -1.39
YDL172CYDL172C SWI5P08153 709 aa6.37□□□□□ -1.39
YDL172CYDL172C HSF1P10961 833 aa6.37□□□□□ -1.39
YDL172CYDL172C SWI4P25302 1093 aaKnown RBP6.37□□□□□ -1.39
YDL172CYDL172C GAC1P28006 793 aa6.37□□□□□ -1.39
YDL172CYDL172C PRR1P28708 518 aa6.37□□□□□ -1.39
YDL172CYDL172C TRM2P33753 639 aa6.37□□□□□ -1.39
YDL172CYDL172C MMS4P38257 691 aa6.37□□□□□ -1.39
YDL172CYDL172C RAD55P38953 406 aa6.37□□□□□ -1.39
YDL172CYDL172C SHE10P53075 577 aa6.37□□□□□ -1.39
YDL172CYDL172C CAF130P53280 1122 aaPredicted RBP6.37□□□□□ -1.39
YDL172CYDL172C YPQ1Q12010 308 aa6.37□□□□□ -1.39
YDL172CYDL172C BI4P03879 638 aa6.36□□□□□ -1.39
YDL172CYDL172C PPH22P23595 377 aa6.36□□□□□ -1.39
YDL172CYDL172C PUF4P25339 888 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
YDL172CYDL172C RPC53P25441 422 aa6.36□□□□□ -1.39
YDL172CYDL172C TFB1P32776 642 aa6.36□□□□□ -1.39
YDL172CYDL172C TSA1P34760 196 aaKnown RBP6.36□□□□□ -1.39
YDL172CYDL172C ERC1P38767 581 aa6.36□□□□□ -1.39
YDL172CYDL172C GGA2P38817 585 aaKnown RBP6.36□□□□□ -1.39
YDL172CYDL172C DOT6P40059 670 aaKnown RBP6.36□□□□□ -1.39
YDL172CYDL172C SDS3P40505 327 aa6.36□□□□□ -1.39
YDL172CYDL172C ECM23Q02710 187 aa6.36□□□□□ -1.39
YDL172CYDL172C TRS120Q04183 1289 aa6.36□□□□□ -1.39
YDL172CYDL172C SHS1Q07657 551 aa6.36□□□□□ -1.39
YDL172CYDL172C HRT3Q12347 344 aa6.36□□□□□ -1.39
YDL172CYDL172C CTF3Q12748 733 aa6.36□□□□□ -1.39
YDL172CYDL172C SMC6Q12749 1114 aa6.36□□□□□ -1.39
YDL172CYDL172C ENO2P00925 437 aaKnown RBP6.35□□□□□ -1.39
YDL172CYDL172C TAF13P11747 167 aa6.35□□□□□ -1.39
YDL172CYDL172C RGP1P16664 663 aa6.35□□□□□ -1.39
YDL172CYDL172C RAD16P31244 790 aa6.35□□□□□ -1.39
YDL172CYDL172C SLA2P33338 968 aa6.35□□□□□ -1.39
YDL172CYDL172C OMA1P36163 345 aa6.35□□□□□ -1.39
YDL172CYDL172C LEU5P38702 357 aa6.35□□□□□ -1.39
YDL172CYDL172C OCA5P38738 679 aa6.35□□□□□ -1.39
YDL172CYDL172C YTA6P40328 754 aa6.35□□□□□ -1.39
YDL172CYDL172C IRC24P40580 263 aa6.35□□□□□ -1.39
YDL172CYDL172C SCD6P45978 349 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
YDL172CYDL172C HER2Q03557 464 aa6.35□□□□□ -1.39
YDL172CYDL172C TIF35Q04067 274 aaKnown RBP6.35□□□□□ -1.39
YDL172CYDL172C FUS2Q05670 677 aa6.35□□□□□ -1.39
YDL172CYDL172C TAF10Q12030 206 aa6.35□□□□□ -1.39
YDL172CYDL172C NHA1Q99271 985 aa6.35□□□□□ -1.39
YDL172CYDL172C RPL4AP10664 362 aaKnown RBP6.34□□□□□ -1.39
YDL172CYDL172C STT3P39007 718 aaKnown RBP6.34□□□□□ -1.39
YDL172CYDL172C YER158CP40095 573 aa6.34□□□□□ -1.39
YDL172CYDL172C RMD8P43620 662 aa6.34□□□□□ -1.39
YDL172CYDL172C RPL4BP49626 362 aaKnown RBP6.34□□□□□ -1.39
YDL172CYDL172C VTC3Q02725 835 aa6.34□□□□□ -1.39
YDL172CYDL172C BSP1Q06604 576 aa6.34□□□□□ -1.39
YDL172CYDL172C SSB1P11484 613 aaKnown RBP6.33□□□□□ -1.4
YDL172CYDL172C FRS2P15625 503 aaKnown RBP6.33□□□□□ -1.4
YDL172CYDL172C FPR1P20081 114 aaKnown RBP6.33□□□□□ -1.4
YDL172CYDL172C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
YDL172CYDL172C NAM7P30771 971 aaKnown RBP6.33□□□□□ -1.4
YDL172CYDL172C SWE1P32944 819 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms