RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIF1	YBR275C	TFG1	P41895	735 aa	Predicted RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	CHA4	P43634	648 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	ASK10	P48361	1146 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	HOS2	P53096	452 aa	Predicted RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	COG6	P53959	839 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	VPS60	Q03390	229 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	RPN5	Q12250	445 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	KTI11	Q3E840	82 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	YOL087C	Q99247	1116 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	HTA1	P04911	132 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	HTA2	P04912	132 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	SPT16	P32558	1035 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	PRM2	P40534	656 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	SOL4	P53315	255 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	SIW14	P53965	281 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	ASI3	P53983	676 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	MUB1	Q03162	620 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	TYW1	Q08960	810 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	YLR108C	Q12259	485 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	NOT5	Q12514	560 aa	Predicted RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	MET5	P47169	1442 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	YBR085C-A	O43137	85 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	CPA2	P03965	1118 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	MRS4	P23500	304 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	MEF1	P25039	761 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	HEM12	P32347	362 aa	Predicted RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	NIP1	P32497	812 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	NFU1	P32860	256 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	SLX8	P40072	274 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	AIM21	P40563	679 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	YJL055W	P47044	245 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	VTC3	Q02725	835 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	TMA64	Q04600	565 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	YLR297W	Q05899	129 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	QCR6	P00127	147 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	CDC24	P11433	854 aa	Predicted RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	SLA1	P32790	1244 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	SEF1	P34228	1148 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	MEF2	P39677	819 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	TPA1	P40032	644 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	SDS3	P40505	327 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	MAL12	P53341	584 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	YNR014W	P53719	212 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	HOS3	Q02959	697 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	OYE2	Q03558	400 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	PRP42	Q03776	544 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	YLL054C	Q12244	843 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	SEC23	P15303	768 aa	Known RBP	3.02	□□□□□ -1.93
RIF1	YBR275C	TUP1	P16649	713 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	PRD1	P25375	712 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	KIP2	P28743	706 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	ZIP1	P31111	875 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	MRE11	P32829	692 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	PIC2	P40035	300 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	RET2	P43621	546 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	NMA2	P53204	395 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	YDR018C	Q12185	396 aa		3.02	□□□□□ -1.93
RIF1	YBR275C	TRM3	Q07527	1436 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	CCP1	P00431	361 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	TRP5	P00931	707 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	STE12	P13574	688 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	DBP1	P24784	617 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	ADH7	P25377	361 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	YFL034W	P43564	1073 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	ARC1	P46672	376 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	SOV1	Q04748	898 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	GGA1	Q06336	557 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	YPK1	P12688	680 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	YHR045W	P38775	560 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	MND2	P40577	368 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	OPT1	P40897	799 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	CEP3	P40969	608 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	APT1	P49435	187 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	PRP43	P53131	767 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	EFM5	P53200	248 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	FAP1	P53971	965 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	RLI1	Q03195	608 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	TPP1	Q03796	238 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	RVB1	Q03940	463 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	UTP21	Q06078	939 aa	Predicted RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	VAC14	Q06708	880 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	DSE3	Q08729	430 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	ECM5	Q03214	1411 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	TOM70	P07213	617 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	SSH4	P32343	579 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	NTH1	P32356	751 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	KAR9	P32526	644 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	PEP7	P32609	515 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	GLG1	P36143	616 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	TY4A-J	P47023	414 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	APS3	P47064	194 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	PRP24	P49960	444 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	IBD2	P53892	351 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	VTI1	Q04338	217 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	CIA1	Q05583	330 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	PNP1	Q05788	311 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	DBP9	Q06218	594 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	ATG17	Q06410	417 aa		3.01	□□□□□ -1.93
RIF1	YBR275C	CFT1	Q06632	1357 aa	Known RBP	3.01	□□□□□ -1.93
RIF1	YBR275C	HXK1	P04806	485 aa	Known RBP	3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 263.7 ms