RNA–Protein interactions for RNA: YBR178W

YBR178W, Transcript of Dubious open reading frame, yeastyeast

Gene YBR178W, Length 375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR178WYBR178W MTR3P48240 250 aaPredicted RBP1.23□□□□□ -2.21
YBR178WYBR178W ABD1P32783 436 aaPredicted RBP1.22□□□□□ -2.21
YBR178WYBR178W YIL024CP40543 189 aa1.22□□□□□ -2.21
YBR178WYBR178W CCM1P48237 864 aaPredicted RBP1.22□□□□□ -2.21
YBR178WYBR178W CSR2Q12734 1121 aa1.22□□□□□ -2.21
YBR178WYBR178W PRC1P00729 532 aa1.21□□□□□ -2.22
YBR178WYBR178W YEL076C-AP0CX16 216 aa1.21□□□□□ -2.22
YBR178WYBR178W YLR464WP0CX17 216 aa1.21□□□□□ -2.22
YBR178WYBR178W YCP4P25349 247 aaKnown RBP1.21□□□□□ -2.22
YBR178WYBR178W PET112P33893 541 aa1.21□□□□□ -2.22
YBR178WYBR178W YEL076CP39971 216 aa1.21□□□□□ -2.22
YBR178WYBR178W YDL086WQ07505 273 aa1.21□□□□□ -2.22
YBR178WYBR178W TOP3P13099 656 aa1.2□□□□□ -2.22
YBR178WYBR178W YCR043CP25361 127 aa1.2□□□□□ -2.22
YBR178WYBR178W AAR2P32357 355 aaPredicted RBP1.2□□□□□ -2.22
YBR178WYBR178W YHR112CP38716 378 aa1.2□□□□□ -2.22
YBR178WYBR178W CRP1P38845 465 aaKnown RBP1.2□□□□□ -2.22
YBR178WYBR178W YGL117WP53133 265 aa1.2□□□□□ -2.22
YBR178WYBR178W YDR179W-AQ03983 463 aa1.2□□□□□ -2.22
YBR178WYBR178W MSC6Q08818 692 aaKnown RBP1.2□□□□□ -2.22
YBR178WYBR178W HRP1Q99383 534 aaKnown RBP1.2□□□□□ -2.22
YBR178WYBR178W YMR085WP0CF18 432 aa1.19□□□□□ -2.22
YBR178WYBR178W ERG6P25087 383 aaKnown RBP1.19□□□□□ -2.22
YBR178WYBR178W MTG2P38860 518 aa1.19□□□□□ -2.22
YBR178WYBR178W PRP31P49704 494 aaPredicted RBP1.19□□□□□ -2.22
YBR178WYBR178W SPR28Q04921 423 aa1.19□□□□□ -2.22
YBR178WYBR178W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
YBR178WYBR178W TRZ1P36159 838 aaPredicted RBP1.18□□□□□ -2.22
YBR178WYBR178W ATG36P46983 293 aa1.18□□□□□ -2.22
YBR178WYBR178W YBP2P53169 641 aa1.18□□□□□ -2.22
YBR178WYBR178W VPS16Q03308 798 aa1.18□□□□□ -2.22
YBR178WYBR178W MRPL4P36517 319 aa1.17□□□□□ -2.22
YBR178WYBR178W APL3P38065 1025 aa1.17□□□□□ -2.22
YBR178WYBR178W TOK1P40310 691 aa1.17□□□□□ -2.22
YBR178WYBR178W SHE10P53075 577 aa1.17□□□□□ -2.22
YBR178WYBR178W HOS2P53096 452 aaPredicted RBP1.17□□□□□ -2.22
YBR178WYBR178W NGL2Q03264 515 aaKnown RBP1.17□□□□□ -2.22
YBR178WYBR178W LEU2P04173 364 aaPredicted RBP1.16□□□□□ -2.22
YBR178WYBR178W AQY1P0CD91 305 aa1.16□□□□□ -2.22
YBR178WYBR178W APD1P38281 316 aa1.16□□□□□ -2.22
YBR178WYBR178W RRT2P38332 387 aa1.16□□□□□ -2.22
YBR178WYBR178W SIM1P40472 476 aa1.16□□□□□ -2.22
YBR178WYBR178W YIR016WP40572 265 aa1.16□□□□□ -2.22
YBR178WYBR178W OPT1P40897 799 aa1.16□□□□□ -2.22
YBR178WYBR178W TES1P41903 349 aaKnown RBP1.16□□□□□ -2.22
YBR178WYBR178W BST1P43571 1029 aa1.16□□□□□ -2.22
YBR178WYBR178W BOP3P53958 396 aa1.16□□□□□ -2.22
YBR178WYBR178W AIM44Q99299 758 aa1.16□□□□□ -2.22
YBR178WYBR178W YPT1P01123 206 aaKnown RBP1.15□□□□□ -2.23
YBR178WYBR178W HEM1P09950 548 aaPredicted RBP1.15□□□□□ -2.23
YBR178WYBR178W CPR8P53728 308 aa1.15□□□□□ -2.23
YBR178WYBR178W CDC34P14682 295 aa1.14□□□□□ -2.23
YBR178WYBR178W ADE2P21264 571 aaKnown RBP1.14□□□□□ -2.23
YBR178WYBR178W REC104P33323 182 aa1.14□□□□□ -2.23
YBR178WYBR178W STM1P39015 273 aaKnown RBP1.14□□□□□ -2.23
YBR178WYBR178W GET2P40056 285 aa1.14□□□□□ -2.23
YBR178WYBR178W MDV1P47025 714 aa1.14□□□□□ -2.23
YBR178WYBR178W NOG2P53742 486 aaKnown RBP1.14□□□□□ -2.23
YBR178WYBR178W RPL15BP54780 204 aaPredicted RBP1.14□□□□□ -2.23
YBR178WYBR178W BUL2Q03758 920 aaKnown RBP1.14□□□□□ -2.23
YBR178WYBR178W ESF1Q06344 628 aaKnown RBP1.14□□□□□ -2.23
YBR178WYBR178W RKI1Q12189 258 aa1.14□□□□□ -2.23
YBR178WYBR178W SSA1P10591 642 aaKnown RBP1.13□□□□□ -2.23
YBR178WYBR178W PMA2P19657 947 aa1.12□□□□□ -2.23
YBR178WYBR178W DAL7P21826 554 aa1.12□□□□□ -2.23
YBR178WYBR178W YCL002CP25565 263 aa1.12□□□□□ -2.23
YBR178WYBR178W APL2P36000 726 aaPredicted RBP1.12□□□□□ -2.23
YBR178WYBR178W MET10P39692 1035 aa1.12□□□□□ -2.23
YBR178WYBR178W SIT1P39980 628 aa1.12□□□□□ -2.23
YBR178WYBR178W VRG4P40107 337 aa1.12□□□□□ -2.23
YBR178WYBR178W YJL043WP47053 257 aa1.12□□□□□ -2.23
YBR178WYBR178W DIP5P53388 608 aa1.12□□□□□ -2.23
YBR178WYBR178W THI21Q08975 551 aa1.12□□□□□ -2.23
YBR178WYBR178W GND1P38720 489 aaKnown RBP1.11□□□□□ -2.23
YBR178WYBR178W YEL068CP39977 110 aa1.11□□□□□ -2.23
YBR178WYBR178W YIL152WP40455 235 aa1.11□□□□□ -2.23
YBR178WYBR178W CFD1P40558 293 aa1.11□□□□□ -2.23
YBR178WYBR178W LRS4Q04087 347 aaKnown RBP1.11□□□□□ -2.23
YBR178WYBR178W LCD1Q04377 747 aa1.11□□□□□ -2.23
YBR178WYBR178W IZH3Q07959 543 aa1.11□□□□□ -2.23
YBR178WYBR178W RAD18P10862 487 aa1.1□□□□□ -2.23
YBR178WYBR178W RPC34P32910 317 aa1.1□□□□□ -2.23
YBR178WYBR178W IMP4P53941 290 aaKnown RBP1.1□□□□□ -2.23
YBR178WYBR178W AIM17P23180 465 aaKnown RBP1.09□□□□□ -2.23
YBR178WYBR178W BCS1P32839 456 aa1.09□□□□□ -2.23
YBR178WYBR178W APT2P36973 181 aa1.09□□□□□ -2.23
YBR178WYBR178W ARG5,6Q01217 863 aa1.09□□□□□ -2.23
YBR178WYBR178W YSH1Q06224 779 aaPredicted RBP1.09□□□□□ -2.23
YBR178WYBR178W BSP1Q06604 576 aa1.09□□□□□ -2.23
YBR178WYBR178W YLR111WQ12528 110 aa1.09□□□□□ -2.23
YBR178WYBR178W PEX1P24004 1043 aa1.08□□□□□ -2.24
YBR178WYBR178W PPZ1P26570 692 aa1.08□□□□□ -2.24
YBR178WYBR178W SEC20P28791 383 aa1.08□□□□□ -2.24
YBR178WYBR178W RIM4P38741 713 aa1.08□□□□□ -2.24
YBR178WYBR178W SSF1P38789 453 aaPredicted RBP1.08□□□□□ -2.24
YBR178WYBR178W COP1P53622 1201 aaKnown RBP1.08□□□□□ -2.24
YBR178WYBR178W DSE3Q08729 430 aa1.08□□□□□ -2.24
YBR178WYBR178W RPL7AP05737 244 aaKnown RBP1.07□□□□□ -2.24
YBR178WYBR178W PRP28P23394 588 aa1.07□□□□□ -2.24
YBR178WYBR178W SBA1P28707 216 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms