RNA–Protein interactions for RNA: YBR091C

TIM12, Transcript of Essential protein of the inner mitochondrial membrane, yeast

Gene TIM12, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM12	YBR091C	MSB2	P32334	1306 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	CSE2	P33308	149 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	NCL1	P38205	684 aa	Known RBP	3.57	□□□□□ -1.84
TIM12	YBR091C	SAF1	P38352	637 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	PAN5	P38787	379 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	MBP1	P39678	833 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	HXT13	P39924	564 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	HMF1	P40037	129 aa	Known RBP	3.57	□□□□□ -1.84
TIM12	YBR091C	VPS27	P40343	622 aa	Known RBP	3.57	□□□□□ -1.84
TIM12	YBR091C	PPT1	P53043	513 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	HXT17	P53631	564 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	HXT15	P54854	567 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	RIP-Chip
TIM12	YBR091C	MDM1	Q01846	1127 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	ATG16	Q03818	150 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	MYO5	Q04439	1219 aa	Known RBP	3.57	□□□□□ -1.84
TIM12	YBR091C	YML053C	Q04978	212 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	EST2	Q06163	884 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	WHI4	Q07655	649 aa	Known RBP	3.57	□□□□□ -1.84
TIM12	YBR091C	TRE2	Q08693	809 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	YOR378W	Q08902	515 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	BMT6	Q12291	365 aa		3.57	□□□□□ -1.84
TIM12	YBR091C	CMR1	Q12510	522 aa	Known RBP	3.57	□□□□□ -1.84
TIM12	YBR091C	ATP4	P05626	244 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
TIM12	YBR091C	LEU1	P07264	779 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	SES1	P07284	462 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	VMA4	P22203	233 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	MAK31	P23059	88 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
TIM12	YBR091C	SGF29	P25554	259 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	CDC48	P25694	835 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	AAR2	P32357	355 aa	Predicted RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	HIR1	P32479	840 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	MKK2	P32491	506 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	DOM34	P33309	386 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	UBP11	P36026	717 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	CCL1	P37366	393 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	BAP2	P38084	609 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	YBR284W	P38150	797 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	SUL1	P38359	859 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	RIM11	P38615	370 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	PCM1	P38628	557 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	YHL026C	P38740	315 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	RIM4	P38741	713 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	YHR202W	P38887	602 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	XDJ1	P39102	459 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	AAD14	P42884	376 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	PEX14	P53112	341 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	HST3	P53687	447 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	YNL134C	P53912	376 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	TIF35	Q04067	274 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	CRD1	Q07560	283 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	CLF1	Q12309	687 aa	Predicted RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	RVB2	Q12464	471 aa	Known RBP	3.56	□□□□□ -1.84
TIM12	YBR091C	ARP6	Q12509	438 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	PCD1	Q12524	340 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	HBN1	Q96VH4	193 aa		3.56	□□□□□ -1.84
TIM12	YBR091C	ADE4	P04046	510 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	RPP1A	P05318	106 aa	Predicted RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	SPE1	P08432	466 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	FUS1	P11710	512 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	ADE2	P21264	571 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	OPI1	P21957	404 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	VBA3	P25594	458 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	RME1	P32338	300 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	BUD2	P33314	1104 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	MRPL7	P36519	292 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	MMF1	P40185	145 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	CNN1	P43618	361 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	CIT3	P43635	486 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	ASE1	P50275	885 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	SKP1	P52286	194 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	ALT2	P52892	507 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	TAM41	P53230	385 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	MDR1	P53258	950 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	CAF120	P53836	1060 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	HFD1	Q04458	532 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	TFC6	Q06339	672 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	MRI1	Q06489	411 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	BRE1	Q07457	700 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	TY1A-DR3	Q12441	440 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	NKP1	Q12493	238 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	YOR111W	Q99210	232 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	MEX67	Q99257	599 aa	Known RBP	3.55	□□□□□ -1.84
TIM12	YBR091C	TRA1	P38811	3744 aa		3.55	□□□□□ -1.84
TIM12	YBR091C	RPS14A	P06367	137 aa	Known RBP	3.54	□□□□□ -1.84
TIM12	YBR091C	HIS5	P07172	385 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	WHI2	P12611	486 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	DBP5	P20449	482 aa	Known RBP	3.54	□□□□□ -1.84
TIM12	YBR091C	RPA135	P22138	1203 aa	Known RBP	3.54	□□□□□ -1.84
TIM12	YBR091C	MEF1	P25039	761 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	DAL1	P32375	460 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	ECM32	P32644	1121 aa	Known RBP	3.54	□□□□□ -1.84
TIM12	YBR091C	MTC2	P34246	357 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	ADD66	P36040	267 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	YBR071W	P38243	211 aa		3.54	□□□□□ -1.84
TIM12	YBR091C	RPS14B	P39516	138 aa	Known RBP	3.54	□□□□□ -1.84
TIM12	YBR091C	SAH1	P39954	449 aa	Known RBP	3.54	□□□□□ -1.84
TIM12	YBR091C	YNR040W	P53736	256 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms