RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11B	YBR048W	YIL092W	P40497	633 aa		4.41	□□□□□ -1.7
RPS11B	YBR048W	VID28	P40547	921 aa		4.41	□□□□□ -1.7
RPS11B	YBR048W	CIA1	Q05583	330 aa		4.41	□□□□□ -1.7
RPS11B	YBR048W	YLR407W	Q06070	228 aa		4.41	□□□□□ -1.7
RPS11B	YBR048W	NGL1	Q08213	363 aa	Known RBP	4.41	□□□□□ -1.7
RPS11B	YBR048W	UPC2	Q12151	913 aa		4.41	□□□□□ -1.7
RPS11B	YBR048W	RPS17A	P02407	136 aa	Known RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	RPS17B	P14127	136 aa	Known RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	RNQ1	P25367	405 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	MSH1	P25846	959 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	NGG1	P32494	702 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	RPN12	P32496	274 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	YPT7	P32939	208 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	MFT1	P33441	392 aa	Known RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	YHR202W	P38887	602 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	ECM1	P39715	212 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	SAW1	P39735	261 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	PZF1	P39933	429 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	CHA4	P43634	648 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	MET12	P46151	657 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	MTR3	P48240	250 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	MTD1	Q02046	320 aa	Known RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	LEE1	Q02799	301 aa	Known RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	YMR210W	Q03649	449 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	MUS81	Q04149	632 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
RPS11B	YBR048W	CWC2	Q12046	339 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS11B	YBR048W	PSF3	Q12146	194 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	RTP1	Q12751	981 aa		4.4	□□□□□ -1.71
RPS11B	YBR048W	GCD1	P09032	578 aa	Predicted RBP	4.39	□□□□□ -1.71
RPS11B	YBR048W	GLN4	P13188	809 aa	Known RBP	4.39	□□□□□ -1.71
RPS11B	YBR048W	CMP2	P14747	604 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	RPA135	P22138	1203 aa	Known RBP	4.39	□□□□□ -1.71
RPS11B	YBR048W	PHO3	P24031	467 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	DGR2	P32330	852 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	HXT4	P32467	576 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	TGL1	P34163	548 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	SHM2	P37291	469 aa	Known RBP	4.39	□□□□□ -1.71
RPS11B	YBR048W	TAF5	P38129	798 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	NOC2	P39744	710 aa	Known RBP	4.39	□□□□□ -1.71
RPS11B	YBR048W	ASI2	P53895	289 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	NSE5	Q03718	556 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	EIS1	Q05050	843 aa	Known RBP	4.39	□□□□□ -1.71
RPS11B	YBR048W	TPO1	Q07824	586 aa		4.39	□□□□□ -1.71
RPS11B	YBR048W	CYC1	P00044	109 aa	Predicted RBP	4.38	□□□□□ -1.71
RPS11B	YBR048W	GAL10	P04397	699 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	HIS5	P07172	385 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	SED4	P25365	1065 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	PET127	P32606	800 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	XRS2	P33301	854 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	LRG1	P35688	1017 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	YBR259W	P38338	688 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	YLF2	P38746	405 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	SAK1	P38990	1142 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	UBP5	P39944	805 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	EAF5	P39995	279 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	IML2	P47031	731 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	EXG2	P52911	562 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	ARG5,6	Q01217	863 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	HMO1	Q03973	246 aa	Known RBP	4.38	□□□□□ -1.71
RPS11B	YBR048W	TRI1	Q05024	226 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	BLS1	Q06071	122 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	OMS1	Q06668	471 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	STP4	Q07351	490 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	SSP2	Q08646	371 aa		4.38	□□□□□ -1.71
RPS11B	YBR048W	YEL076C-A	P0CX16	216 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	YLR464W	P0CX17	216 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	IME1	P21190	360 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	IMG2	P25642	146 aa	Predicted RBP	4.37	□□□□□ -1.71
RPS11B	YBR048W	IMP2'	P32351	346 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	SEG2	P34250	1132 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	APL2	P36000	726 aa	Predicted RBP	4.37	□□□□□ -1.71
RPS11B	YBR048W	YEL076C	P39971	216 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	PFA3	P42836	336 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	NCS6	P53088	359 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	YBP2	P53169	641 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	ESF2	P53743	316 aa	Known RBP	4.37	□□□□□ -1.71
RPS11B	YBR048W	REC102	Q02721	264 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	ASM4	Q05166	528 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	MCM21	Q06675	368 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	NEW1	Q08972	1196 aa	Known RBP	4.37	□□□□□ -1.71
RPS11B	YBR048W	NUR1	Q12066	484 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	VPS5	Q92331	675 aa		4.37	□□□□□ -1.71
RPS11B	YBR048W	YLR415C	O13578	112 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	VAS1	P07806	1104 aa	Known RBP	4.36	□□□□□ -1.71
RPS11B	YBR048W	GFA1	P14742	717 aa	Known RBP	4.36	□□□□□ -1.71
RPS11B	YBR048W	SEC18	P18759	758 aa	Known RBP	4.36	□□□□□ -1.71
RPS11B	YBR048W	BEM3	P32873	1128 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	RRN3	P36070	627 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	PSY4	P38193	441 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	SIC1	P38634	284 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	DUN1	P39009	513 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	SCS2	P40075	244 aa	Known RBP	4.36	□□□□□ -1.71
RPS11B	YBR048W	RAD26	P40352	1085 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	MAD2	P40958	196 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	PLB2	Q03674	706 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	PPN1	Q04119	674 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	YPS7	Q06325	596 aa		4.36	□□□□□ -1.71
RPS11B	YBR048W	WHI4	Q07655	649 aa	Known RBP	4.36	□□□□□ -1.71
RPS11B	YBR048W	VHS3	Q08438	674 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms