RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 PRPF4BQ13523 1007 aaKnown RBP16.34■□□□□ 0.21
PRDM15-201ENST00000269844 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
PRDM15-201ENST00000269844 FANCCQ00597 558 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 BRF1Q92994 677 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 TCEANC2Q96MN5 208 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 SMIM23A6NLE4 172 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 HIP1RO75146 1068 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 RANBP1P43487 201 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 TMEM132AQ24JP5 1023 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 RASIP1Q5U651 963 aa16.34■□□□□ 0.21
PRDM15-201ENST00000269844 INTS8Q75QN2 995 aaKnown RBP16.34■□□□□ 0.21
PRDM15-201ENST00000269844 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
PRDM15-201ENST00000269844 SLFN14P0C7P3 912 aa16.33■□□□□ 0.21
PRDM15-201ENST00000269844 SH3BGRP55822 239 aaPredicted RBP16.33■□□□□ 0.21
PRDM15-201ENST00000269844 CABP2Q9NPB3 220 aa16.33■□□□□ 0.21
PRDM15-201ENST00000269844 NOP2P46087 812 aaKnown RBP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 MTIF2P46199 727 aaKnown RBP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 WASF1Q92558 559 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 ATAD2Q6PL18 1390 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 A0A1W2PRG0 241 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 RNF40O75150 1001 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 IFT88Q13099 833 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 CEP120Q8N960 986 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 SF3A3Q12874 501 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 CCDC122Q5T0U0 273 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 PLEKHM2Q8IWE5 1019 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 CCDC97Q96F63 343 aaPredicted RBP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 ST7Q9NRC1 585 aa16.33■□□□□ 0.2
PRDM15-201ENST00000269844 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.2
PRDM15-201ENST00000269844 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 TTC19Q6DKK2 380 aaPredicted RBP16.32■□□□□ 0.2
PRDM15-201ENST00000269844 STK38LQ9Y2H1 464 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 TSC22D3Q99576 134 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 IGF1RP08069 1367 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 KRT18P05783 430 aaKnown RBP16.32■□□□□ 0.2
PRDM15-201ENST00000269844 KANK3Q6NY19 840 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
PRDM15-201ENST00000269844 UBLCP1Q8WVY7 318 aaPredicted RBP16.32■□□□□ 0.2
PRDM15-201ENST00000269844 ZBTB16Q05516 673 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 CNGA4Q8IV77 575 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 PSDA5PKW4 1024 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-201ENST00000269844 PDE1CQ14123 709 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-201ENST00000269844 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-201ENST00000269844 CCDC151A5D8V7 595 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 HGSO14964 777 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-201ENST00000269844 IDEP14735 1019 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 POLE2P56282 527 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 PSMD2Q13200 908 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-201ENST00000269844 SPAG1Q07617 926 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 VPS36Q86VN1 386 aa16.31■□□□□ 0.2
PRDM15-201ENST00000269844 XPO4Q9C0E2 1151 aaKnown RBP16.31■□□□□ 0.2
PRDM15-201ENST00000269844 GOLGA8KD6RF30 607 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 GIGYF1O75420 1035 aaPredicted RBP16.3■□□□□ 0.2
PRDM15-201ENST00000269844 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
PRDM15-201ENST00000269844 MUM1Q2TAK8 710 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 PPP1R13BQ96KQ4 1090 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 YIPF3Q9GZM5 350 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.3■□□□□ 0.2
PRDM15-201ENST00000269844 ANKRD7Q92527 254 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 USH1CQ9Y6N9 552 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 RFC1P35251 1148 aaPredicted RBP16.3■□□□□ 0.2
PRDM15-201ENST00000269844 SPDL1Q96EA4 605 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 CFAP70Q5T0N1 1121 aa16.3■□□□□ 0.2
PRDM15-201ENST00000269844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRDM15-201ENST00000269844 FCHSD2O94868 740 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 CASKIN1Q8WXD9 1431 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 NFE2L2Q16236 605 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 ZMAT2Q96NC0 199 aaKnown RBP16.29■□□□□ 0.2
PRDM15-201ENST00000269844 SMC6Q96SB8 1091 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 FAM169AQ9Y6X4 670 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 BOLA2Q9H3K6 86 aa16.29■□□□□ 0.2
PRDM15-201ENST00000269844 RUFY4Q6ZNE9 571 aa16.28■□□□□ 0.2
PRDM15-201ENST00000269844 TXNDC2Q86VQ3 553 aa16.28■□□□□ 0.2
PRDM15-201ENST00000269844 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
PRDM15-201ENST00000269844 VCX3BQ9H321 246 aa16.28■□□□□ 0.2
PRDM15-201ENST00000269844 VCX3AQ9NNX9 186 aa16.28■□□□□ 0.2
PRDM15-201ENST00000269844 SPTLC2O15270 562 aa16.28■□□□□ 0.2
PRDM15-201ENST00000269844 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
PRDM15-201ENST00000269844 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms