RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Mxd3Q80US8 206 aa20.47■□□□□ 0.87
Trim54-202ENSMUST00000202769 Cxcl9P18340 126 aa20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Oog3Q3UWY1 500 aa20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Aldh1l2Q8K009 923 aa20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Trappc12Q8K2L8 797 aa20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Pank1Q8K4K6 548 aa20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Irs4Q9Z0Y7 1216 aa20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Polr2aP08775 1970 aaKnown RBP20.46■□□□□ 0.87
Trim54-202ENSMUST00000202769 Q3UJP5 209 aa20.45■□□□□ 0.86
Trim54-202ENSMUST00000202769 Ppp1r1bQ60829 194 aa20.45■□□□□ 0.86
Trim54-202ENSMUST00000202769 Ufl1Q8CCJ3 793 aaKnown RBP20.45■□□□□ 0.86
Trim54-202ENSMUST00000202769 Myh4Q5SX39 1939 aa20.45■□□□□ 0.86
Trim54-202ENSMUST00000202769 Mast3Q3U214 1321 aa20.45■□□□□ 0.86
Trim54-202ENSMUST00000202769 Usp34Q6ZQ93 3582 aa20.45■□□□□ 0.86
Trim54-202ENSMUST00000202769 Mmp14P53690 582 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Gm5592Q3V0A6 857 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Bms1Q6PGF5 1284 aaKnown RBP20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Polr3dQ91WD1 398 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Trmt44Q9D2Q2 713 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Ankrd63A2ARS0 390 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Pde4aO89084 844 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 LdhdQ7TNG8 484 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Dis3l2Q8CI75 870 aaKnown RBP20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Tmc2Q8R4P4 888 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Fbxo33Q8VE08 562 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Rwdd1Q9CQK7 243 aa20.44■□□□□ 0.86
Trim54-202ENSMUST00000202769 Arfgef1G3X9K3 1846 aaKnown RBP20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Kdm3aQ6PCM1 1323 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 AfdnQ9QZQ1 1820 aaKnown RBP20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Ets1P27577 440 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Atp2b3Q0VF55 1220 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Cwc27Q3TKY6 469 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 RubcnQ80U62 956 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Kbtbd13Q8C828 458 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Lman1lQ8VCD3 505 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Tm4sf4Q91XD3 202 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Hdac9Q99N13 588 aa20.43■□□□□ 0.86
Trim54-202ENSMUST00000202769 Gm4340L7N2C4 268 aa20.42■□□□□ 0.86
Trim54-202ENSMUST00000202769 Irf6P97431 467 aa20.42■□□□□ 0.86
Trim54-202ENSMUST00000202769 Fam83bQ0VBM2 1012 aa20.42■□□□□ 0.86
Trim54-202ENSMUST00000202769 Abhd15Q5F2F2 459 aa20.42■□□□□ 0.86
Trim54-202ENSMUST00000202769 Telo2Q9DC40 840 aaKnown RBP20.42■□□□□ 0.86
Trim54-202ENSMUST00000202769 Celf2Q9Z0H4 508 aaKnown RBP20.42■□□□□ 0.86
Trim54-202ENSMUST00000202769 Triml2E9PW10 424 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Wnt10bP48614 389 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 L3mbtl2P59178 703 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Ankrd13cQ3UX43 541 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Trim58Q5NCC9 485 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Sept9Q80UG5 583 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Zcchc17Q9ESX4 241 aaKnown RBP20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Letm1Q9Z2I0 738 aa20.41■□□□□ 0.86
Trim54-202ENSMUST00000202769 Slc10a5Q5PT54 434 aa20.4■□□□□ 0.86
Trim54-202ENSMUST00000202769 Ppp4r3aQ6P2K6 820 aa20.4■□□□□ 0.86
Trim54-202ENSMUST00000202769 CpdO89001 1377 aa20.39■□□□□ 0.86
Trim54-202ENSMUST00000202769 Pou3f3P31361 497 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Sept1P42209 366 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Spg7Q3ULF4 781 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Kiaa0753Q6A000 959 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Tmem79Q9D709 391 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Tgm5Q9D7I9 724 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Nfe2l3Q9WTM4 660 aa20.39■□□□□ 0.85
Trim54-202ENSMUST00000202769 Atp8b2P98199 1209 aa20.38■□□□□ 0.85
Trim54-202ENSMUST00000202769 Chd5A2A8L1 1946 aa20.38■□□□□ 0.85
Trim54-202ENSMUST00000202769 Srgap3Q812A2 1099 aa20.37■□□□□ 0.85
Trim54-202ENSMUST00000202769 Sptlc3Q8BG54 563 aa20.37■□□□□ 0.85
Trim54-202ENSMUST00000202769 Ppp1r42Q8R1Z4 357 aa20.37■□□□□ 0.85
Trim54-202ENSMUST00000202769 Scn10aQ6QIY3 1958 aa20.37■□□□□ 0.85
Trim54-202ENSMUST00000202769 Nphp3Q7TNH6 1325 aa20.37■□□□□ 0.85
Trim54-202ENSMUST00000202769 A0A1W2P7S8 802 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Arid4aF8VPQ2 1261 aaKnown RBP20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Nkx1-1G3UXB3 402 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Cdc5lQ6A068 802 aaKnown RBP20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Ripk4Q9ERK0 786 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Ccne2Q9Z238 404 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Myh13B1AR69 1938 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Spata18Q0P557 537 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Ift57Q8BXG3 429 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Edc3Q8K2D3 508 aaKnown RBP20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Zbtb3Q91X45 518 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Stag1Q9D3E6 1258 aa20.36■□□□□ 0.85
Trim54-202ENSMUST00000202769 Npr3P70180 536 aa20.35■□□□□ 0.85
Trim54-202ENSMUST00000202769 Nlrp1aQ2LKU9 1182 aa20.35■□□□□ 0.85
Trim54-202ENSMUST00000202769 Akap4Q60662 849 aa20.35■□□□□ 0.85
Trim54-202ENSMUST00000202769 Tll1Q62381 1013 aa20.35■□□□□ 0.85
Trim54-202ENSMUST00000202769 Ddx20Q9JJY4 825 aaKnown RBP20.35■□□□□ 0.85
Trim54-202ENSMUST00000202769 Mapkapk5O54992 473 aa20.34■□□□□ 0.85
Trim54-202ENSMUST00000202769 Timm10P62073 90 aa20.34■□□□□ 0.85
Trim54-202ENSMUST00000202769 Fam102bQ8BQS4 339 aa20.33■□□□□ 0.84
Trim54-202ENSMUST00000202769 Neurod6P48986 337 aa20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 WasP70315 520 aa20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 Gsdma2Q32M21 443 aa20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 NfkbibQ60778 359 aa20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 Rbm15bQ6PHZ5 887 aaKnown RBP20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 SpidrQ8BGX7 933 aa20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 Sart3Q9JLI8 962 aaKnown RBP20.32■□□□□ 0.84
Trim54-202ENSMUST00000202769 Izumo3A6PWV3 263 aa20.31■□□□□ 0.84
Trim54-202ENSMUST00000202769 UncxO08934 530 aa20.31■□□□□ 0.84
Trim54-202ENSMUST00000202769 Myo1bP46735 1107 aa20.31■□□□□ 0.84
Trim54-202ENSMUST00000202769 Tm6sf1P58749 370 aa20.31■□□□□ 0.84
Trim54-202ENSMUST00000202769 Adamts19P59509 1210 aa20.31■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms