RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Edrf1Q6GQV7 1239 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Sptlc3Q8BG54 563 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Kcnq3Q8K3F6 873 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Emilin1Q99K41 1017 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 MthfsQ9D110 203 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Kcnn1Q9EQR3 537 aa18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Utp3Q9JI13 469 aaKnown RBP18.33■□□□□ 0.53
Vcan-201ENSMUST00000109543 Ifit1Q64282 463 aa18.33■□□□□ 0.52
Vcan-201ENSMUST00000109543 Wdr33Q8K4P0 1330 aaKnown RBP18.33■□□□□ 0.52
Vcan-201ENSMUST00000109543 Carmil3Q3UFQ8 1375 aa18.33■□□□□ 0.52
Vcan-201ENSMUST00000109543 Myh1Q5SX40 1942 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Ccdc173A0JLY1 547 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Ift57Q8BXG3 429 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Sik3Q6P4S6 1311 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Ankrd31A0A140LI88 1765 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Nwd2Q6P5U7 1742 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Pde8bE9Q4S1 865 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Riok1Q922Q2 567 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Ube3bQ9ES34 1070 aa18.32■□□□□ 0.52
Vcan-201ENSMUST00000109543 Sept1P42209 366 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Esco1Q69Z69 843 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Snx13Q6PHS6 957 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Miga2Q8BK03 593 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Mast2Q60592 1734 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Rgs9O54828 675 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Pald1P70261 859 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Slc38a10Q5I012 1090 aa18.31■□□□□ 0.52
Vcan-201ENSMUST00000109543 Kndc1Q0KK55 1742 aa18.3■□□□□ 0.52
Vcan-201ENSMUST00000109543 Prl3d1P18121 224 aa18.3■□□□□ 0.52
Vcan-201ENSMUST00000109543 Slf2Q6P9P0 1278 aa18.3■□□□□ 0.52
Vcan-201ENSMUST00000109543 Susd4Q8BH32 490 aa18.3■□□□□ 0.52
Vcan-201ENSMUST00000109543 Trim59Q922Y2 403 aa18.3■□□□□ 0.52
Vcan-201ENSMUST00000109543 Cyp2d9P11714 504 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Adcy5P84309 1262 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Bach1P97302 739 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Lins1Q3U1D0 764 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Ddb1Q3U1J4 1140 aaKnown RBP18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 ImmtQ8CAQ8 757 aaKnown RBP18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Bicd2Q921C5 820 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Add3Q9QYB5 706 aaKnown RBP18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Hap1O35668 628 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Usp25P57080 1055 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Csrnp1P59054 583 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Plbd2Q3TCN2 594 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Sept12Q9D451 317 aa18.29■□□□□ 0.52
Vcan-201ENSMUST00000109543 Plekhf1Q3TB82 279 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 Usp28Q5I043 1051 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 TrhQ62361 256 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 Trim34aQ99PP6 485 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 Ush1cQ9ES64 910 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 Plekho1Q9JIY0 408 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 Vmn2r23E9PXI5 849 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 TnmdQ9EP64 317 aa18.28■□□□□ 0.52
Vcan-201ENSMUST00000109543 Setdb1O88974 1307 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Col3a1P08121 1464 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Qtrt2B8ZXI1 415 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 1700113H08RikE9Q9Q5 327 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Dctn1O08788 1281 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Pdcl2Q78Y63 240 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Cep55Q8BT07 462 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Alg3Q8K2A8 438 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Adam1bQ8R534 806 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Bcl11bQ99PV8 884 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Tbc1d7Q9D0K0 293 aa18.27■□□□□ 0.52
Vcan-201ENSMUST00000109543 Pcdhb9E9Q5G2 828 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Il17raQ60943 864 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Anp32cQ64G17 123 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Polr3gQ6NXY9 223 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Cnot6lQ8VEG6 555 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Psrc1Q9D0P7 329 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Myh7Q91Z83 1935 aa18.27■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mctp1E9PV86 951 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Snrpa1P57784 255 aaKnown RBP18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Tmem59lQ7TNI2 337 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Pm20d1Q8C165 503 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mtmr3Q8K296 1196 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Becn1O88597 448 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Tyro3P55144 880 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Ifit1bl2Q3U687 466 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 VeztQ3ZK22 780 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Ccdc82Q6PG04 518 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Klc3Q91W40 508 aa18.26■□□□□ 0.51
Vcan-201ENSMUST00000109543 Lrp5Q91VN0 1614 aa18.25■□□□□ 0.51
Vcan-201ENSMUST00000109543 Ccdc162pQ0VG85 912 aa18.25■□□□□ 0.51
Vcan-201ENSMUST00000109543 Fsd2Q8BZ52 692 aa18.25■□□□□ 0.51
Vcan-201ENSMUST00000109543 Terf2ipQ91VL8 393 aa18.25■□□□□ 0.51
Vcan-201ENSMUST00000109543 4931408C20RikE9PWP9 1381 aa18.25■□□□□ 0.51
Vcan-201ENSMUST00000109543 Bach2P97303 839 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Pla2g4fQ50L41 855 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Alx1Q8C8B0 326 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Sh3bgrQ9WUZ7 214 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Acap3Q6NXL5 833 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Lmod1Q8BVA4 595 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Fbxo3Q9DC63 480 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Nfe2l3Q9WTM4 660 aa18.24■□□□□ 0.51
Vcan-201ENSMUST00000109543 Cfap58B2RW38 873 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Cyp2c23E9Q5K4 494 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Gm4340L7N2C4 268 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 U2af1l4Q8BGJ9 220 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Kansl3A2RSY1 903 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 68.1 ms