RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 ARC40P38328 384 aaKnown RBP1.83□□□□□ -2.12
snR48snR48 POL32P47110 350 aa1.83□□□□□ -2.12
snR48snR48 ESC2Q06340 456 aa1.83□□□□□ -2.12
snR48snR48 PHO5P00635 467 aa1.82□□□□□ -2.12
snR48snR48 PPH3P32345 308 aa1.82□□□□□ -2.12
snR48snR48 SLD2P34252 453 aa1.82□□□□□ -2.12
snR48snR48 FMO1P38866 432 aa1.82□□□□□ -2.12
snR48snR48 SAK1P38990 1142 aa1.82□□□□□ -2.12
snR48snR48 FYV10P40492 516 aa1.82□□□□□ -2.12
snR48snR48 ASN1P49089 572 aaKnown RBP1.82□□□□□ -2.12
snR48snR48 PIP2P52960 996 aa1.82□□□□□ -2.12
snR48snR48 SMA2Q04658 369 aa1.82□□□□□ -2.12
snR48snR48 GPR1Q12361 961 aa1.82□□□□□ -2.12
snR48snR48 ABD1P32783 436 aaPredicted RBP1.81□□□□□ -2.12
snR48snR48 PET112P33893 541 aa1.81□□□□□ -2.12
snR48snR48 YBR259WP38338 688 aa1.81□□□□□ -2.12
snR48snR48 MBP1P39678 833 aa1.81□□□□□ -2.12
snR48snR48 ECM1P39715 212 aa1.81□□□□□ -2.12
snR48snR48 NMD5P46970 1048 aa1.81□□□□□ -2.12
snR48snR48 ERG13P54839 491 aaKnown RBP1.81□□□□□ -2.12
snR48snR48 GAD1Q04792 585 aa1.81□□□□□ -2.12
snR48snR48 BUD7Q08754 746 aa1.81□□□□□ -2.12
snR48snR48 AI5_ALPHAQ9ZZX1 630 aa1.81□□□□□ -2.12
snR48snR48 TUP1P16649 713 aa1.8□□□□□ -2.12
snR48snR48 TSR4P25040 408 aa1.8□□□□□ -2.12
snR48snR48 MVD1P32377 396 aaKnown RBP1.8□□□□□ -2.12
snR48snR48 SET3P36124 751 aa1.8□□□□□ -2.12
snR48snR48 JHD1P40034 492 aa1.8□□□□□ -2.12
snR48snR48 USV1Q12132 391 aa1.8□□□□□ -2.12
snR48snR48 HAL9Q12180 1030 aa1.8□□□□□ -2.12
snR48snR48 CDC34P14682 295 aa1.79□□□□□ -2.12
snR48snR48 LYS9P38999 446 aa1.79□□□□□ -2.12
snR48snR48 FAA2P39518 744 aa1.79□□□□□ -2.12
snR48snR48 NUP60P39705 539 aa1.79□□□□□ -2.12
snR48snR48 SSY5P47002 699 aa1.79□□□□□ -2.12
snR48snR48 YDR306CQ06640 478 aa1.79□□□□□ -2.12
snR48snR48 SRL1Q08673 210 aa1.79□□□□□ -2.12
snR48snR48 RPS9AO13516 197 aaKnown RBP1.78□□□□□ -2.12
snR48snR48 ATE1P16639 503 aa1.78□□□□□ -2.12
snR48snR48 AAR2P32357 355 aaPredicted RBP1.78□□□□□ -2.12
snR48snR48 YRO2P38079 344 aa1.78□□□□□ -2.12
snR48snR48 JSN1P47135 1091 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
snR48snR48 HXT16P47185 567 aa1.78□□□□□ -2.12
snR48snR48 MTL1P53214 551 aa1.78□□□□□ -2.12
snR48snR48 ADE8P04161 214 aa1.77□□□□□ -2.13
snR48snR48 LSB5P25369 354 aa1.77□□□□□ -2.13
snR48snR48 OAF1P39720 1047 aaPredicted RBP1.77□□□□□ -2.13
snR48snR48 YJR107WP47145 328 aa1.77□□□□□ -2.13
snR48snR48 ARG7Q04728 441 aa1.77□□□□□ -2.13
snR48snR48 BMS1Q08965 1183 aaKnown RBP1.77□□□□□ -2.13
snR48snR48 PRS5Q12265 496 aaKnown RBP1.77□□□□□ -2.13
snR48snR48 YEL1P34225 687 aa1.76□□□□□ -2.13
snR48snR48 MET10P39692 1035 aa1.76□□□□□ -2.13
snR48snR48 SPC98P53540 846 aa1.76□□□□□ -2.13
snR48snR48 ATP23P53722 227 aa1.76□□□□□ -2.13
snR48snR48 RSC9Q03124 581 aa1.76□□□□□ -2.13
snR48snR48 VPS16Q03308 798 aa1.76□□□□□ -2.13
snR48snR48 RTT103Q05543 409 aa1.76□□□□□ -2.13
snR48snR48 CLF1Q12309 687 aaPredicted RBP1.76□□□□□ -2.13
snR48snR48 TPK2P06245 380 aa1.75□□□□□ -2.13
snR48snR48 SIT1P39980 628 aa1.75□□□□□ -2.13
snR48snR48 SNO3P43544 222 aa1.75□□□□□ -2.13
snR48snR48 CCM1P48237 864 aaPredicted RBP1.75□□□□□ -2.13
snR48snR48 SEN54Q02825 467 aaPredicted RBP1.75□□□□□ -2.13
snR48snR48 RMD1Q03441 430 aa1.75□□□□□ -2.13
snR48snR48 BUL2Q03758 920 aaKnown RBP1.75□□□□□ -2.13
snR48snR48 FAL1Q12099 399 aaKnown RBP1.75□□□□□ -2.13
snR48snR48 YPR089WO13585 888 aa1.74□□□□□ -2.13
snR48snR48 ERT1P38140 529 aa1.74□□□□□ -2.13
snR48snR48 KRI1P42846 591 aaKnown RBP1.74□□□□□ -2.13
snR48snR48 FAA4P47912 694 aaKnown RBP1.74□□□□□ -2.13
snR48snR48 GDE1Q02979 1223 aa1.74□□□□□ -2.13
snR48snR48 CTK1Q03957 528 aaKnown RBP1.74□□□□□ -2.13
snR48snR48 RGC1Q06108 1083 aaKnown RBP1.74□□□□□ -2.13
snR48snR48 SBA1P28707 216 aaKnown RBP1.73□□□□□ -2.13
snR48snR48 EXO84P38261 753 aa1.73□□□□□ -2.13
snR48snR48 YGL260WP53056 76 aa1.73□□□□□ -2.13
snR48snR48 OYE2Q03558 400 aaKnown RBP1.73□□□□□ -2.13
snR48snR48 ZRT2Q12436 422 aa1.73□□□□□ -2.13
snR48snR48 AAD3P25612 363 aa1.72□□□□□ -2.13
snR48snR48 MGM1P32266 881 aa1.72□□□□□ -2.13
snR48snR48 VBA5P36172 582 aa1.72□□□□□ -2.13
snR48snR48 TPO2P53283 614 aa1.72□□□□□ -2.13
snR48snR48 CYS3P31373 394 aaKnown RBP1.71□□□□□ -2.14
snR48snR48 ATO2P32907 282 aa1.71□□□□□ -2.14
snR48snR48 MNR2P35724 969 aa1.71□□□□□ -2.14
snR48snR48 YGR151CP53287 111 aa1.71□□□□□ -2.14
snR48snR48 AGP1P25376 633 aa1.7□□□□□ -2.14
snR48snR48 REC104P33323 182 aa1.7□□□□□ -2.14
snR48snR48 KSP1P38691 1029 aaKnown RBP1.7□□□□□ -2.14
snR48snR48 YIL169CP40442 995 aa1.7□□□□□ -2.14
snR48snR48 SKP2P42843 763 aa1.7□□□□□ -2.14
snR48snR48 CWC24P53769 259 aa1.7□□□□□ -2.14
snR48snR48 MRPL1Q04599 285 aa1.7□□□□□ -2.14
snR48snR48 RSC3Q06639 885 aa1.7□□□□□ -2.14
snR48snR48 YOR022CQ12204 715 aa1.7□□□□□ -2.14
snR48snR48 CRC1Q12289 327 aa1.7□□□□□ -2.14
snR48snR48 PRC1P00729 532 aa1.69□□□□□ -2.14
snR48snR48 LEU2P04173 364 aaPredicted RBP1.69□□□□□ -2.14
snR48snR48 RTT107P38850 1070 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms