RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	FOL1	P53848	824 aa		4.18	□□□□□ -1.74
snR17a	snR17a	NAN1	Q02931	896 aa	Known RBP	4.18	□□□□□ -1.74
snR17a	snR17a	SSL1	Q04673	461 aa	Predicted RBP	4.18	□□□□□ -1.74
snR17a	snR17a	GGA1	Q06336	557 aa		4.18	□□□□□ -1.74
snR17a	snR17a	RRP9	Q06506	573 aa	Known RBP	4.18	□□□□□ -1.74
snR17a	snR17a	ISA1	Q07821	250 aa	Predicted RBP	4.18	□□□□□ -1.74
snR17a	snR17a	FMP25	Q08023	583 aa		4.18	□□□□□ -1.74
snR17a	snR17a	CLP1	Q08685	445 aa	Predicted RBP	4.18	□□□□□ -1.74
snR17a	snR17a	FBP1	P09201	348 aa		4.17	□□□□□ -1.74
snR17a	snR17a	NAT1	P12945	854 aa	Known RBP	4.17	□□□□□ -1.74
snR17a	snR17a	MNN1	P39106	762 aa		4.17	□□□□□ -1.74
snR17a	snR17a	TOK1	P40310	691 aa		4.17	□□□□□ -1.74
snR17a	snR17a	SDP1	P40479	209 aa		4.17	□□□□□ -1.74
snR17a	snR17a	RSC8	P43609	557 aa	Known RBP	4.17	□□□□□ -1.74
snR17a	snR17a	UBA2	P52488	636 aa		4.17	□□□□□ -1.74
snR17a	snR17a	YKR011C	Q02209	353 aa		4.17	□□□□□ -1.74
snR17a	snR17a	ATG16	Q03818	150 aa		4.17	□□□□□ -1.74
snR17a	snR17a	VMS1	Q04311	632 aa	Known RBP	4.17	□□□□□ -1.74
snR17a	snR17a	EAF1	Q06337	982 aa		4.17	□□□□□ -1.74
snR17a	snR17a	PEX19	Q07418	342 aa		4.17	□□□□□ -1.74
snR17a	snR17a	YLR040C	Q07988	224 aa		4.17	□□□□□ -1.74
snR17a	snR17a	YOL073C	Q08232	322 aa		4.17	□□□□□ -1.74
snR17a	snR17a	PPM2	Q08282	695 aa		4.17	□□□□□ -1.74
snR17a	snR17a	PCL8	Q08966	492 aa		4.17	□□□□□ -1.74
snR17a	snR17a	SWM1	Q12379	170 aa		4.17	□□□□□ -1.74
snR17a	snR17a	OSH2	Q12451	1283 aa		4.17	□□□□□ -1.74
snR17a	snR17a	RPS9A	O13516	197 aa	Known RBP	4.16	□□□□□ -1.74
snR17a	snR17a	CLN1	P20437	546 aa		4.16	□□□□□ -1.74
snR17a	snR17a	DPB3	P27344	201 aa		4.16	□□□□□ -1.74
snR17a	snR17a	MOH1	P38191	138 aa		4.16	□□□□□ -1.74
snR17a	snR17a	CEP3	P40969	608 aa		4.16	□□□□□ -1.74
snR17a	snR17a	RNT1	Q02555	471 aa		4.16	□□□□□ -1.74
snR17a	snR17a	BUL2	Q03758	920 aa	Known RBP	4.16	□□□□□ -1.74
snR17a	snR17a	YOR378W	Q08902	515 aa		4.16	□□□□□ -1.74
snR17a	snR17a	YPR071W	Q12346	211 aa		4.16	□□□□□ -1.74
snR17a	snR17a	ARE1	P25628	610 aa		4.15	□□□□□ -1.75
snR17a	snR17a	URA1	P28272	314 aa	Predicted RBP	4.15	□□□□□ -1.75
snR17a	snR17a	RPL8B	P29453	256 aa	Known RBP	4.15	□□□□□ -1.75
snR17a	snR17a	RPD3	P32561	433 aa		4.15	□□□□□ -1.75
snR17a	snR17a	ECM32	P32644	1121 aa	Known RBP	4.15	□□□□□ -1.75
snR17a	snR17a	YBR284W	P38150	797 aa		4.15	□□□□□ -1.75
snR17a	snR17a	RKM3	P38222	552 aa		4.15	□□□□□ -1.75
snR17a	snR17a	CTF8	P38877	133 aa		4.15	□□□□□ -1.75
snR17a	snR17a	BUL1	P48524	976 aa		4.15	□□□□□ -1.75
snR17a	snR17a	PUS2	P53167	370 aa		4.15	□□□□□ -1.75
snR17a	snR17a	PEX8	P53248	589 aa		4.15	□□□□□ -1.75
snR17a	snR17a	ARV1	Q06541	321 aa		4.15	□□□□□ -1.75
snR17a	snR17a	VIP1	Q06685	1146 aa	Known RBP	4.15	□□□□□ -1.75
snR17a	snR17a	RUD3	Q12234	484 aa	Known RBP	4.15	□□□□□ -1.75
snR17a	snR17a	YEF3	P16521	1044 aa	Known RBP	4.14	□□□□□ -1.75
snR17a	snR17a	AAD3	P25612	363 aa		4.14	□□□□□ -1.75
snR17a	snR17a	SEC21	P32074	935 aa	Known RBP	4.14	□□□□□ -1.75
snR17a	snR17a	VPH1	P32563	840 aa	Known RBP	4.14	□□□□□ -1.75
snR17a	snR17a	APL2	P36000	726 aa	Predicted RBP	4.14	□□□□□ -1.75
snR17a	snR17a	PET10	P36139	283 aa		4.14	□□□□□ -1.75
snR17a	snR17a	JNM1	P36224	373 aa		4.14	□□□□□ -1.75
snR17a	snR17a	BUD6	P41697	788 aa		4.14	□□□□□ -1.75
snR17a	snR17a	DAS1	P47005	663 aa		4.14	□□□□□ -1.75
snR17a	snR17a	NIT3	P49954	291 aa		4.14	□□□□□ -1.75
snR17a	snR17a	YGR016W	P53209	190 aa		4.14	□□□□□ -1.75
snR17a	snR17a	RSC1	P53236	928 aa		4.14	□□□□□ -1.75
snR17a	snR17a	HOL1	P53389	586 aa		4.14	□□□□□ -1.75
snR17a	snR17a	TIM44	Q01852	431 aa		4.14	□□□□□ -1.75
snR17a	snR17a	TRM11	Q12463	433 aa		4.14	□□□□□ -1.75
snR17a	snR17a	MET3	P08536	511 aa		4.13	□□□□□ -1.75
snR17a	snR17a	RAD4	P14736	754 aa		4.13	□□□□□ -1.75
snR17a	snR17a	MER1	P16523	270 aa		4.13	□□□□□ -1.75
snR17a	snR17a	KRR1	P25586	316 aa	Predicted RBP	4.13	□□□□□ -1.75
snR17a	snR17a	ARC19	P33204	171 aa	Known RBP	4.13	□□□□□ -1.75
snR17a	snR17a	PEX6	P33760	1030 aa		4.13	□□□□□ -1.75
snR17a	snR17a	MTC2	P34246	357 aa		4.13	□□□□□ -1.75
snR17a	snR17a	ERT1	P38140	529 aa		4.13	□□□□□ -1.75
snR17a	snR17a	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
snR17a	snR17a	APE4	P38821	490 aa		4.13	□□□□□ -1.75
snR17a	snR17a	CCT3	P39077	534 aa	Known RBP	4.13	□□□□□ -1.75
snR17a	snR17a	CAJ1	P39101	391 aa		4.13	□□□□□ -1.75
snR17a	snR17a	NOG2	P53742	486 aa	Known RBP	4.13	□□□□□ -1.75
snR17a	snR17a	HDA1	P53973	706 aa		4.13	□□□□□ -1.75
snR17a	snR17a	REX2	P54964	269 aa	Known RBP	4.13	□□□□□ -1.75
snR17a	snR17a	SLU7	Q02775	382 aa	Known RBP	4.13	□□□□□ -1.75
snR17a	snR17a	RPN4	Q03465	531 aa		4.13	□□□□□ -1.75
snR17a	snR17a	YLR352W	Q06479	807 aa		4.13	□□□□□ -1.75
snR17a	snR17a	OMS1	Q06668	471 aa		4.13	□□□□□ -1.75
snR17a	snR17a	SLX4	Q12098	748 aa		4.13	□□□□□ -1.75
snR17a	snR17a	ACF2	Q12168	779 aa		4.13	□□□□□ -1.75
snR17a	snR17a	NFI1	Q12216	726 aa		4.13	□□□□□ -1.75
snR17a	snR17a	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
snR17a	snR17a	HBN1	Q96VH4	193 aa		4.13	□□□□□ -1.75
snR17a	snR17a	MET6	P05694	767 aa	Known RBP	4.12	□□□□□ -1.75
snR17a	snR17a	PPR1	P07272	904 aa	Predicted RBP	4.12	□□□□□ -1.75
snR17a	snR17a	ALG7	P07286	448 aa		4.12	□□□□□ -1.75
snR17a	snR17a	HSP60	P19882	572 aa	Known RBP	4.12	□□□□□ -1.75
snR17a	snR17a	APN1	P22936	367 aa		4.12	□□□□□ -1.75
snR17a	snR17a	SWC3	P31376	625 aa		4.12	□□□□□ -1.75
snR17a	snR17a	NIP100	P33420	868 aa		4.12	□□□□□ -1.75
snR17a	snR17a	CTF13	P35203	478 aa		4.12	□□□□□ -1.75
snR17a	snR17a	YHR078W	P38799	552 aa		4.12	□□□□□ -1.75
snR17a	snR17a	RRP8	P38961	392 aa	Known RBP	4.12	□□□□□ -1.75
snR17a	snR17a	YJL049W	P47048	450 aa		4.12	□□□□□ -1.75
snR17a	snR17a	RAD17	P48581	401 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms