RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W TUB3P09734 445 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W TAL1P15019 335 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W HPR1P17629 752 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W PRP22P24384 1145 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W POL4P25615 582 aa2.34□□□□□ -2.04
SEC16YPL085W ERG7P38604 731 aa2.34□□□□□ -2.04
SEC16YPL085W IRR1P40541 1150 aa2.34□□□□□ -2.04
SEC16YPL085W RSC8P43609 557 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W ECM23Q02710 187 aa2.34□□□□□ -2.04
SEC16YPL085W CLU1Q03690 1277 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W POB3Q04636 552 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W NSL1Q12143 216 aa2.34□□□□□ -2.04
SEC16YPL085W SPS1P08458 490 aa2.34□□□□□ -2.04
SEC16YPL085W NUC1P08466 329 aa2.34□□□□□ -2.04
SEC16YPL085W IDI1P15496 288 aa2.34□□□□□ -2.04
SEC16YPL085W EFT1P32324 842 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W CBF2P32504 956 aa2.34□□□□□ -2.04
SEC16YPL085W YSC83P32792 385 aa2.34□□□□□ -2.04
SEC16YPL085W FTH1P38310 465 aa2.34□□□□□ -2.04
SEC16YPL085W MTG2P38860 518 aa2.34□□□□□ -2.04
SEC16YPL085W HAL5P38970 855 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W ERP2P39704 215 aa2.34□□□□□ -2.04
SEC16YPL085W DPH1P40487 425 aaKnown RBP2.34□□□□□ -2.04
SEC16YPL085W MRPS35P53292 345 aa2.34□□□□□ -2.04
SEC16YPL085W YMR018WQ04364 514 aa2.34□□□□□ -2.04
SEC16YPL085W ALE1Q08548 619 aa2.34□□□□□ -2.04
SEC16YPL085W APC2Q12440 853 aa2.34□□□□□ -2.04
SEC16YPL085W NGR1P32831 672 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W TSA1P34760 196 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W YBL086CP38177 466 aa2.33□□□□□ -2.04
SEC16YPL085W ATG3P40344 310 aa2.33□□□□□ -2.04
SEC16YPL085W YRB1P41920 201 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W CBK1P53894 756 aa2.33□□□□□ -2.04
SEC16YPL085W GSF2Q04697 403 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W TSR2Q06672 205 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W COS7Q07788 383 aa2.33□□□□□ -2.04
SEC16YPL085W KEL3Q08979 651 aaPredicted RBP2.33□□□□□ -2.04
SEC16YPL085W HMI1Q12039 706 aa2.33□□□□□ -2.04
SEC16YPL085W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04 RIP-Chip
SEC16YPL085W PHO13P19881 312 aa2.33□□□□□ -2.04
SEC16YPL085W SWI3P32591 825 aa2.33□□□□□ -2.04
SEC16YPL085W UGA4P32837 571 aa2.33□□□□□ -2.04
SEC16YPL085W ATG19P35193 415 aa2.33□□□□□ -2.04
SEC16YPL085W RER2P35196 286 aa2.33□□□□□ -2.04
SEC16YPL085W MNR2P35724 969 aa2.33□□□□□ -2.04
SEC16YPL085W MMS21P38632 267 aa2.33□□□□□ -2.04
SEC16YPL085W YER184CP39961 794 aa2.33□□□□□ -2.04
SEC16YPL085W UBP9P39967 754 aa2.33□□□□□ -2.04
SEC16YPL085W VID28P40547 921 aa2.33□□□□□ -2.04
SEC16YPL085W RSM7P47150 247 aa2.33□□□□□ -2.04
SEC16YPL085W YGR153WP48238 217 aa2.33□□□□□ -2.04
SEC16YPL085W APT1P49435 187 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W ESF2P53743 316 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W STE20Q03497 939 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W SML1Q04964 104 aa2.33□□□□□ -2.04
SEC16YPL085W YLH47Q06493 454 aa2.33□□□□□ -2.04
SEC16YPL085W SYN8P31377 255 aa2.33□□□□□ -2.04
SEC16YPL085W MGM1P32266 881 aa2.33□□□□□ -2.04
SEC16YPL085W SKT5P34226 696 aa2.33□□□□□ -2.04
SEC16YPL085W STB6P36085 766 aa2.33□□□□□ -2.04
SEC16YPL085W SPC34P36131 295 aa2.33□□□□□ -2.04
SEC16YPL085W PTC2P39966 464 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W RGD2P43556 714 aa2.33□□□□□ -2.04
SEC16YPL085W RPN11P43588 306 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W AIM23P47015 356 aa2.33□□□□□ -2.04
SEC16YPL085W CCM1P48237 864 aaPredicted RBP2.33□□□□□ -2.04
SEC16YPL085W YLR455WQ06188 304 aa2.33□□□□□ -2.04
SEC16YPL085W FLC1Q08967 793 aa2.33□□□□□ -2.04
SEC16YPL085W HRT3Q12347 344 aa2.33□□□□□ -2.04
SEC16YPL085W AHA1Q12449 350 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W HAP2P06774 265 aa2.33□□□□□ -2.04
SEC16YPL085W MTF1P14908 341 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W RPB4P20433 221 aaPredicted RBP2.33□□□□□ -2.04
SEC16YPL085W SEC1P30619 724 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W RCK2P38623 610 aa2.33□□□□□ -2.04
SEC16YPL085W RFC3P38629 340 aa2.33□□□□□ -2.04
SEC16YPL085W GLG2P47011 380 aa2.33□□□□□ -2.04
SEC16YPL085W SAP4P53036 818 aa2.33□□□□□ -2.04
SEC16YPL085W YTP1P53584 459 aa2.33□□□□□ -2.04
SEC16YPL085W NCS2P53923 493 aaPredicted RBP2.33□□□□□ -2.04
SEC16YPL085W PKH3Q03306 898 aaPredicted RBP2.33□□□□□ -2.04
SEC16YPL085W RBA50Q04418 439 aa2.33□□□□□ -2.04
SEC16YPL085W GTB1Q04924 702 aa2.33□□□□□ -2.04
SEC16YPL085W THI7Q05998 598 aa2.33□□□□□ -2.04
SEC16YPL085W SGD1Q06132 899 aa2.33□□□□□ -2.04
SEC16YPL085W NDL1Q06568 189 aa2.33□□□□□ -2.04
SEC16YPL085W REX3Q12090 404 aa2.33□□□□□ -2.04
SEC16YPL085W SFI1Q12369 946 aa2.33□□□□□ -2.04
SEC16YPL085W CSR2Q12734 1121 aa2.33□□□□□ -2.04
SEC16YPL085W SUP45P12385 437 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W CAF20P12962 161 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W MET8P15807 274 aa2.33□□□□□ -2.04
SEC16YPL085W MLS1P30952 554 aa2.33□□□□□ -2.04
SEC16YPL085W SSP1P38871 571 aa2.33□□□□□ -2.04
SEC16YPL085W TPA1P40032 644 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W YGL140CP53120 1219 aa2.33□□□□□ -2.04
SEC16YPL085W ENT5Q03769 411 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W YML002WP0CF17 737 aa2.33□□□□□ -2.04
SEC16YPL085W HMG2P12684 1045 aa2.33□□□□□ -2.04
SEC16YPL085W SEC18P18759 758 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms