RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	SNA3	P14359	133 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	SEC2	P17065	759 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	AFT1	P22149	690 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	KIN82	P25341	720 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	KIP1	P28742	1111 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	GCD11	P32481	527 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	TCD1	P38756	429 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	YMR124W	P39523	943 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	BUD16	P39988	312 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	FTR1	P40088	404 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	ACF4	P47129	309 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	HSH155	P49955	971 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	TAD1	P53065	400 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	YGR021W	P53212	290 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	MAL13	P53338	473 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	BOP3	P53958	396 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	RPA49	Q01080	415 aa	Predicted RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	SOV1	Q04748	898 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	NOB1	Q08444	459 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	ICL2	Q12031	575 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	MCM16	Q12262	181 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	YDL206W	Q12424	762 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	SWI3	P32591	825 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	SMY2	P32909	740 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	RRP1	P35178	278 aa	Predicted RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	BYE1	P36106	594 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	REI1	P38344	393 aa	Predicted RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	SGM1	P47166	707 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	SCS3	P53012	380 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	SYH1	Q02875	849 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	NGL3	Q03210	505 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	MSC2	Q03455	724 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	IWR1	Q07532	353 aa	Predicted RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	SLX4	Q12098	748 aa		5.67	□□□□□ -1.5
ULA1	YPL003W	NOP14	Q99207	810 aa	Known RBP	5.67	□□□□□ -1.5
ULA1	YPL003W	TRP2	P00899	507 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	CDC33	P07260	213 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	KEX2	P13134	814 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	SEC21	P32074	935 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	TMT1	P32643	299 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	SKG6	P32900	734 aa	Predicted RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	FLR1	P38124	548 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	MMS4	P38257	691 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	KSP1	P38691	1029 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	SET5	P38890	526 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	PSY2	P40164	858 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	DAS1	P47005	663 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	ASN1	P49089	572 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	ORC5	P50874	479 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	JJJ1	P53863	590 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	TBF1	Q02457	562 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	TRS130	Q03660	1102 aa		5.66	□□□□□ -1.5
ULA1	YPL003W	SGT2	Q12118	346 aa	Known RBP	5.66	□□□□□ -1.5
ULA1	YPL003W	WHI2	P12611	486 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	SCJ1	P25303	377 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	HEM3	P28789	327 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	MSS51	P32335	436 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	BLI1	P35727	113 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	MRX3	P38172	270 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	VID24	P38263	362 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	PSF2	P40359	213 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	SKP2	P42843	763 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	YJR107W	P47145	328 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	KAP114	P53067	1004 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	NCS6	P53088	359 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	BTN2	P53286	410 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	DAK1	P54838	584 aa	Known RBP	5.65	□□□□□ -1.51
ULA1	YPL003W	STE20	Q03497	939 aa	Known RBP	5.65	□□□□□ -1.51
ULA1	YPL003W	YMR018W	Q04364	514 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	ERF2	Q06551	359 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	YLR001C	Q07895	862 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	SIL1	Q08199	421 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	GIS3	Q12418	502 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	OSH2	Q12451	1283 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	ATG11	Q12527	1178 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	RTP1	Q12751	981 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	TOM1	Q03280	3268 aa		5.65	□□□□□ -1.51
ULA1	YPL003W	AMS1	P22855	1083 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	YJU3	P28321	313 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	CNS1	P33313	385 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	CSG2	P35206	410 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	TRZ1	P36159	838 aa	Predicted RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	EXO5	P38289	585 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	SMF1	P38925	575 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	SPC72	P39723	622 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	YTA12	P40341	825 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	AIM21	P40563	679 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	MAD1	P40957	749 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	CPR7	P47103	393 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	CLA4	P48562	842 aa		5.64	□□□□□ -1.51
ULA1	YPL003W	MNP1	P53163	194 aa	Predicted RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	DRN1	P53255	507 aa	Known RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	DUS1	P53759	423 aa	Known RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	CUS1	Q02554	436 aa	Predicted RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	CEF1	Q03654	590 aa	Predicted RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	YMR114C	Q04471	368 aa	Known RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	POB3	Q04636	552 aa	Known RBP	5.64	□□□□□ -1.51
ULA1	YPL003W	SPT2	P06843	333 aa	Predicted RBP	5.63	□□□□□ -1.51
ULA1	YPL003W	ERG11	P10614	530 aa		5.63	□□□□□ -1.51
ULA1	YPL003W	CDC42	P19073	191 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms