RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W VMS1Q04311 632 aaKnown RBP4.72□□□□□ -1.65
HSH49YOR319W YOR378WQ08902 515 aa4.72□□□□□ -1.65
HSH49YOR319W RPS9AO13516 197 aaKnown RBP4.71□□□□□ -1.66
HSH49YOR319W FBP1P09201 348 aa4.71□□□□□ -1.66
HSH49YOR319W PER1P25625 357 aa4.71□□□□□ -1.66
HSH49YOR319W MOH1P38191 138 aa4.71□□□□□ -1.66
HSH49YOR319W RPN10P38886 268 aaKnown RBP4.71□□□□□ -1.66
HSH49YOR319W SDP1P40479 209 aa4.71□□□□□ -1.66
HSH49YOR319W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
HSH49YOR319W UBA2P52488 636 aa4.71□□□□□ -1.66
HSH49YOR319W NOG2P53742 486 aaKnown RBP4.71□□□□□ -1.66
HSH49YOR319W NHX1Q04121 633 aa4.71□□□□□ -1.66
HSH49YOR319W ATG33Q06485 197 aa4.71□□□□□ -1.66
HSH49YOR319W GIN4Q12263 1142 aa4.71□□□□□ -1.66
HSH49YOR319W HMG1P12683 1054 aa4.7□□□□□ -1.66
HSH49YOR319W AEP2P22136 580 aa4.7□□□□□ -1.66
HSH49YOR319W DPB3P27344 201 aa4.7□□□□□ -1.66
HSH49YOR319W URA1P28272 314 aaPredicted RBP4.7□□□□□ -1.66
HSH49YOR319W PLC1P32383 869 aa4.7□□□□□ -1.66
HSH49YOR319W TRZ1P36159 838 aaPredicted RBP4.7□□□□□ -1.66
HSH49YOR319W KTR4P38131 464 aa4.7□□□□□ -1.66
HSH49YOR319W SUL1P38359 859 aa4.7□□□□□ -1.66
HSH49YOR319W OAF1P39720 1047 aaPredicted RBP4.7□□□□□ -1.66
HSH49YOR319W DOT6P40059 670 aaKnown RBP4.7□□□□□ -1.66
HSH49YOR319W DAS1P47005 663 aa4.7□□□□□ -1.66
HSH49YOR319W ALY2P47029 1046 aa4.7□□□□□ -1.66
HSH49YOR319W HDA1P53973 706 aa4.7□□□□□ -1.66
HSH49YOR319W PEX19Q07418 342 aa4.7□□□□□ -1.66
HSH49YOR319W NYV1Q12255 253 aa4.7□□□□□ -1.66
HSH49YOR319W TRP4P07285 380 aaPredicted RBP4.69□□□□□ -1.66
HSH49YOR319W KAR1P11927 433 aa4.69□□□□□ -1.66
HSH49YOR319W TFC4P33339 1025 aa4.69□□□□□ -1.66
HSH49YOR319W CTF8P38877 133 aa4.69□□□□□ -1.66
HSH49YOR319W NAB3P38996 802 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
HSH49YOR319W MNN11P46985 422 aaKnown RBP4.69□□□□□ -1.66
HSH49YOR319W YGR153WP48238 217 aa4.69□□□□□ -1.66
HSH49YOR319W BUL1P48524 976 aa4.69□□□□□ -1.66
HSH49YOR319W TAD1P53065 400 aa4.69□□□□□ -1.66
HSH49YOR319W AIM14P53109 570 aa4.69□□□□□ -1.66
HSH49YOR319W PUS2P53167 370 aa4.69□□□□□ -1.66
HSH49YOR319W YNL034WP53963 612 aa4.69□□□□□ -1.66
HSH49YOR319W YNL018CP53976 612 aa4.69□□□□□ -1.66
HSH49YOR319W TGL2P54857 326 aa4.69□□□□□ -1.66
HSH49YOR319W YLR040CQ07988 224 aa4.69□□□□□ -1.66
HSH49YOR319W BUD21Q08492 214 aaPredicted RBP4.69□□□□□ -1.66
HSH49YOR319W SWM1Q12379 170 aa4.69□□□□□ -1.66
HSH49YOR319W YEF3P16521 1044 aaKnown RBP4.68□□□□□ -1.66
HSH49YOR319W DAL7P21826 554 aa4.68□□□□□ -1.66
HSH49YOR319W ERG4P25340 473 aa4.68□□□□□ -1.66
HSH49YOR319W SEC21P32074 935 aaKnown RBP4.68□□□□□ -1.66
HSH49YOR319W HIR1P32479 840 aa4.68□□□□□ -1.66
HSH49YOR319W FUI1P38196 639 aa4.68□□□□□ -1.66
HSH49YOR319W HSL7P38274 827 aa4.68□□□□□ -1.66
HSH49YOR319W RLP7P40693 322 aaKnown RBP4.68□□□□□ -1.66
HSH49YOR319W RET2P43621 546 aa4.68□□□□□ -1.66
HSH49YOR319W NIT2P47016 307 aa4.68□□□□□ -1.66
HSH49YOR319W HXT16P47185 567 aa4.68□□□□□ -1.66
HSH49YOR319W SLU7Q02775 382 aaKnown RBP4.68□□□□□ -1.66
HSH49YOR319W RMP1Q12530 201 aa4.68□□□□□ -1.66
HSH49YOR319W SST2P11972 698 aaKnown RBP4.67□□□□□ -1.66
HSH49YOR319W DID4P36108 232 aa4.67□□□□□ -1.66
HSH49YOR319W CCT5P40413 562 aaKnown RBP4.67□□□□□ -1.66
HSH49YOR319W YOL073CQ08232 322 aa4.67□□□□□ -1.66
HSH49YOR319W DIF1O13577 133 aa4.66□□□□□ -1.66
HSH49YOR319W MIH1P23748 554 aa4.66□□□□□ -1.66
HSH49YOR319W CYS3P31373 394 aaKnown RBP4.66□□□□□ -1.66
HSH49YOR319W CCR4P31384 837 aaKnown RBP4.66□□□□□ -1.66
HSH49YOR319W TDA3P38758 523 aa4.66□□□□□ -1.66
HSH49YOR319W YHR078WP38799 552 aa4.66□□□□□ -1.66
HSH49YOR319W SET5P38890 526 aaKnown RBP4.66□□□□□ -1.66
HSH49YOR319W GPP2P40106 250 aaKnown RBP4.66□□□□□ -1.66
HSH49YOR319W RNT1Q02555 471 aa4.66□□□□□ -1.66
HSH49YOR319W ATG16Q03818 150 aa4.66□□□□□ -1.66
HSH49YOR319W LRS4Q04087 347 aaKnown RBP4.66□□□□□ -1.66
HSH49YOR319W YBR182C-AQ8TGU6 64 aa4.66□□□□□ -1.66
HSH49YOR319W MPD2Q99316 277 aa4.66□□□□□ -1.66
HSH49YOR319W CTF13P35203 478 aa4.65□□□□□ -1.67
HSH49YOR319W SHR5P41912 237 aa4.65□□□□□ -1.67
HSH49YOR319W UBX4P54730 416 aa4.65□□□□□ -1.67
HSH49YOR319W MET14Q02196 202 aa4.65□□□□□ -1.67
HSH49YOR319W YDR338CQ05497 695 aa4.65□□□□□ -1.67
HSH49YOR319W PHM6Q05637 104 aa4.65□□□□□ -1.67
HSH49YOR319W TRM11Q12463 433 aa4.65□□□□□ -1.67
HSH49YOR319W YCL002CP25565 263 aa4.64□□□□□ -1.67
HSH49YOR319W SAP190P36123 1033 aa4.64□□□□□ -1.67
HSH49YOR319W EMP65P40085 556 aa4.64□□□□□ -1.67
HSH49YOR319W UBC9P50623 157 aaPredicted RBP4.64□□□□□ -1.67
HSH49YOR319W PIP2P52960 996 aa4.64□□□□□ -1.67
HSH49YOR319W ERG5P54781 538 aa4.64□□□□□ -1.67
HSH49YOR319W ECM9Q02202 377 aa4.64□□□□□ -1.67
HSH49YOR319W APM4Q99186 491 aa4.64□□□□□ -1.67
HSH49YOR319W PRC1P00729 532 aa4.63□□□□□ -1.67
HSH49YOR319W PIF1P07271 859 aa4.63□□□□□ -1.67
HSH49YOR319W ALG7P07286 448 aa4.63□□□□□ -1.67
HSH49YOR319W MET3P08536 511 aa4.63□□□□□ -1.67
HSH49YOR319W TUB3P09734 445 aaKnown RBP4.63□□□□□ -1.67
HSH49YOR319W PGI1P12709 554 aaKnown RBP4.63□□□□□ -1.67
HSH49YOR319W TRX2P22803 104 aaKnown RBP4.63□□□□□ -1.67
HSH49YOR319W NIC96P34077 839 aa4.63□□□□□ -1.67
HSH49YOR319W BIT2P38346 545 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms