RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	RPP2A	P05319	106 aa	Known RBP	3.97	□□□□□ -1.77
VAM10	YOR068C	DPB3	P27344	201 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	TOD6	P34219	525 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	THI80	P35202	319 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	ENP1	P38333	483 aa	Known RBP	3.97	□□□□□ -1.77
VAM10	YOR068C	RPN10	P38886	268 aa	Known RBP	3.97	□□□□□ -1.77
VAM10	YOR068C	PLB1	P39105	664 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	DAS1	P47005	663 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	UBC9	P50623	157 aa	Predicted RBP	3.97	□□□□□ -1.77
VAM10	YOR068C	ZIP2	P53061	704 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	GPG1	P53130	126 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
VAM10	YOR068C	SLU7	Q02775	382 aa	Known RBP	3.97	□□□□□ -1.77
VAM10	YOR068C	NHX1	Q04121	633 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	NYV1	Q12255	253 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	YLR149C	Q99296	730 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	Q0142	Q9ZZW4	58 aa		3.97	□□□□□ -1.77
VAM10	YOR068C	TUB3	P09734	445 aa	Known RBP	3.96	□□□□□ -1.78
VAM10	YOR068C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
VAM10	YOR068C	SEC21	P32074	935 aa	Known RBP	3.96	□□□□□ -1.78
VAM10	YOR068C	LST4	P34239	828 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	YKR051W	P36142	418 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	DOT6	P40059	670 aa	Known RBP	3.96	□□□□□ -1.78
VAM10	YOR068C	SSY5	P47002	699 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	YJR120W	P47157	116 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	ASM4	Q05166	528 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	TMA10	Q06177	86 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	GUD1	Q07729	489 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	SLX4	Q12098	748 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	GPR1	Q12361	961 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	NKP1	Q12493	238 aa		3.96	□□□□□ -1.78
VAM10	YOR068C	RNA1	P11745	407 aa	Known RBP	3.95	□□□□□ -1.78
VAM10	YOR068C	PRP4	P20053	465 aa	Known RBP	3.95	□□□□□ -1.78
VAM10	YOR068C	PWP2	P25635	923 aa	Known RBP	3.95	□□□□□ -1.78
VAM10	YOR068C	CCR4	P31384	837 aa	Known RBP	3.95	□□□□□ -1.78
VAM10	YOR068C	RPN12	P32496	274 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	PRP19	P32523	503 aa	Known RBP	3.95	□□□□□ -1.78
VAM10	YOR068C	SEC6	P32844	805 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	TFC3	P34111	1160 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	HSL7	P38274	827 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	MSS4	P38994	779 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	BNA2	P47125	453 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	YJR096W	P47137	282 aa		3.95	□□□□□ -1.78
VAM10	YOR068C	FLR1	P38124	548 aa		3.94	□□□□□ -1.78
VAM10	YOR068C	SAK1	P38990	1142 aa		3.94	□□□□□ -1.78
VAM10	YOR068C	YFL052W	P43551	465 aa		3.94	□□□□□ -1.78
VAM10	YOR068C	NPY1	P53164	384 aa		3.94	□□□□□ -1.78
VAM10	YOR068C	PEX8	P53248	589 aa		3.94	□□□□□ -1.78
VAM10	YOR068C	ASI2	P53895	289 aa		3.94	□□□□□ -1.78
VAM10	YOR068C	MTQ2	Q03920	221 aa	Predicted RBP	3.94	□□□□□ -1.78
VAM10	YOR068C	MUS81	Q04149	632 aa	Predicted RBP	3.94	□□□□□ -1.78
VAM10	YOR068C	YDR341C	Q05506	607 aa	Known RBP	3.94	□□□□□ -1.78
VAM10	YOR068C	YTM1	Q12024	460 aa	Predicted RBP	3.94	□□□□□ -1.78
VAM10	YOR068C	ATP4	P05626	244 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	KAR4	P25583	335 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	EUG1	P32474	517 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	YBR071W	P38243	211 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	CKB2	P38930	258 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	VHR1	P40522	640 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	PFA3	P42836	336 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	EXG2	P52911	562 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	PEX14	P53112	341 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	SND1	Q04007	877 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	RPN7	Q06103	429 aa	Known RBP	3.93	□□□□□ -1.78
VAM10	YOR068C	IMH1	Q06704	911 aa	Known RBP	3.93	□□□□□ -1.78
VAM10	YOR068C	LAS17	Q12446	633 aa		3.93	□□□□□ -1.78
VAM10	YOR068C	QCR6	P00127	147 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	YEF3	P16521	1044 aa	Known RBP	3.92	□□□□□ -1.78
VAM10	YOR068C	SWI3	P32591	825 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	YKR018C	P36114	725 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	MUM2	P38236	366 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	PZF1	P39933	429 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	GPP1	P41277	250 aa	Known RBP	3.92	□□□□□ -1.78
VAM10	YOR068C	GZF3	P42944	551 aa	Known RBP	3.92	□□□□□ -1.78
VAM10	YOR068C	BFA1	P47113	574 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	ARP4	P80428	489 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	PKH1	Q03407	766 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	PEX19	Q07418	342 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	APL5	Q08951	932 aa	Known RBP	3.92	□□□□□ -1.78
VAM10	YOR068C	SWM1	Q12379	170 aa		3.92	□□□□□ -1.78
VAM10	YOR068C	YLR358C	O13565	187 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	AEP2	P22136	580 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	STE11	P23561	717 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	MAL31	P38156	614 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	SEC27	P41811	889 aa	Known RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	DUG1	P43616	481 aa	Known RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	MTR3	P48240	250 aa	Predicted RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	TAN1	P53072	289 aa	Predicted RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	MCM6	P53091	1017 aa	Known RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	HOS2	P53096	452 aa	Predicted RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	PCL10	P53124	433 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	MRPS35	P53292	345 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	COG6	P53959	839 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	MDM1	Q01846	1127 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	CLU1	Q03690	1277 aa	Known RBP	3.91	□□□□□ -1.78
VAM10	YOR068C	HSP42	Q12329	375 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	SPT7	P35177	1332 aa		3.91	□□□□□ -1.78
VAM10	YOR068C	TRX2	P22803	104 aa	Known RBP	3.9	□□□□□ -1.79
VAM10	YOR068C	HIR1	P32479	840 aa		3.9	□□□□□ -1.79
VAM10	YOR068C	VPS24	P36095	224 aa	Known RBP	3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms