RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C SFL1P20134 766 aa2.79□□□□□ -1.96
SOK2YMR016C EMC3P36039 253 aa2.79□□□□□ -1.96
SOK2YMR016C SDS3P40505 327 aa2.79□□□□□ -1.96
SOK2YMR016C AIM14P53109 570 aa2.79□□□□□ -1.96
SOK2YMR016C PEX8P53248 589 aa2.79□□□□□ -1.96
SOK2YMR016C COG6P53959 839 aa2.79□□□□□ -1.96
SOK2YMR016C VPS30Q02948 557 aa2.79□□□□□ -1.96
SOK2YMR016C MTQ2Q03920 221 aaPredicted RBP2.79□□□□□ -1.96
SOK2YMR016C MET7Q08645 548 aa2.79□□□□□ -1.96
SOK2YMR016C TMA17Q12513 150 aa2.79□□□□□ -1.96
SOK2YMR016C PER1P25625 357 aa2.79□□□□□ -1.96
SOK2YMR016C PPH3P32345 308 aa2.79□□□□□ -1.96
SOK2YMR016C YHL017WP38745 532 aa2.79□□□□□ -1.96
SOK2YMR016C YGR237CP50089 785 aa2.79□□□□□ -1.96
SOK2YMR016C HSL1P34244 1518 aa2.78□□□□□ -1.96
SOK2YMR016C RAD18P10862 487 aa2.78□□□□□ -1.96
SOK2YMR016C HMG1P12683 1054 aa2.78□□□□□ -1.96
SOK2YMR016C DAL3P32459 195 aa2.78□□□□□ -1.96
SOK2YMR016C RPD3P32561 433 aa2.78□□□□□ -1.96
SOK2YMR016C DSS1P39112 969 aa2.78□□□□□ -1.96
SOK2YMR016C YGL081WP53156 320 aa2.78□□□□□ -1.96
SOK2YMR016C ARP4P80428 489 aa2.78□□□□□ -1.96
SOK2YMR016C UME1Q03010 460 aa2.78□□□□□ -1.96
SOK2YMR016C DLT1Q04216 342 aa2.78□□□□□ -1.96
SOK2YMR016C SSL1Q04673 461 aaPredicted RBP2.78□□□□□ -1.96
SOK2YMR016C ATG33Q06485 197 aa2.78□□□□□ -1.96
SOK2YMR016C PEX19Q07418 342 aa2.78□□□□□ -1.96
SOK2YMR016C ADE8P04161 214 aa2.78□□□□□ -1.97
SOK2YMR016C EUG1P32474 517 aa2.78□□□□□ -1.97
SOK2YMR016C YJR096WP47137 282 aa2.78□□□□□ -1.97
SOK2YMR016C TAD1P53065 400 aa2.78□□□□□ -1.97
SOK2YMR016C ERG5P54781 538 aa2.78□□□□□ -1.97
SOK2YMR016C YOL057WQ08225 711 aa2.78□□□□□ -1.97
SOK2YMR016C FRE5Q08908 694 aa2.78□□□□□ -1.97
SOK2YMR016C GFA1P14742 717 aaKnown RBP2.77□□□□□ -1.97
SOK2YMR016C CDC48P25694 835 aaKnown RBP2.77□□□□□ -1.97
SOK2YMR016C CCR4P31384 837 aaKnown RBP2.77□□□□□ -1.97
SOK2YMR016C SLU7Q02775 382 aaKnown RBP2.77□□□□□ -1.97
SOK2YMR016C RKR1Q04781 1562 aa2.77□□□□□ -1.97
SOK2YMR016C TYS1P36421 394 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C YBR071WP38243 211 aa2.76□□□□□ -1.97
SOK2YMR016C HXT6P39003 570 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C HXT7P39004 570 aa2.76□□□□□ -1.97
SOK2YMR016C CCM1P48237 864 aaPredicted RBP2.76□□□□□ -1.97
SOK2YMR016C THI21Q08975 551 aa2.76□□□□□ -1.97
SOK2YMR016C HAL9Q12180 1030 aa2.76□□□□□ -1.97
SOK2YMR016C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
SOK2YMR016C TRM11Q12463 433 aa2.76□□□□□ -1.97
SOK2YMR016C Q0142Q9ZZW4 58 aa2.76□□□□□ -1.97
SOK2YMR016C NOT3P06102 836 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C PIF1P07271 859 aa2.76□□□□□ -1.97
SOK2YMR016C ILV6P25605 309 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C HOG1P32485 435 aa2.76□□□□□ -1.97
SOK2YMR016C SER1P33330 395 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C CTF13P35203 478 aa2.76□□□□□ -1.97
SOK2YMR016C ELO3P40319 345 aa2.76□□□□□ -1.97
SOK2YMR016C SDA1P53313 767 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C YNL034WP53963 612 aa2.76□□□□□ -1.97
SOK2YMR016C YNL018CP53976 612 aa2.76□□□□□ -1.97
SOK2YMR016C LEE1Q02799 301 aaKnown RBP2.76□□□□□ -1.97
SOK2YMR016C ASM4Q05166 528 aa2.76□□□□□ -1.97
SOK2YMR016C MRH1Q12117 320 aaPredicted RBP2.76□□□□□ -1.97
SOK2YMR016C TRM13Q12383 476 aa2.76□□□□□ -1.97
SOK2YMR016C RPS21AP0C0V8 87 aaKnown RBP2.75□□□□□ -1.97
SOK2YMR016C SEC21P32074 935 aaKnown RBP2.75□□□□□ -1.97
SOK2YMR016C PLC1P32383 869 aa2.75□□□□□ -1.97
SOK2YMR016C STE13P33894 931 aa2.75□□□□□ -1.97
SOK2YMR016C SDP1P40479 209 aa2.75□□□□□ -1.97
SOK2YMR016C ECM9Q02202 377 aa2.75□□□□□ -1.97
SOK2YMR016C DCS2Q12123 353 aa2.75□□□□□ -1.97
SOK2YMR016C SWM1Q12379 170 aa2.75□□□□□ -1.97
SOK2YMR016C PRP4P20053 465 aaKnown RBP2.75□□□□□ -1.97
SOK2YMR016C HCA4P20448 770 aaKnown RBP2.75□□□□□ -1.97
SOK2YMR016C DAL7P21826 554 aa2.75□□□□□ -1.97
SOK2YMR016C URA1P28272 314 aaPredicted RBP2.75□□□□□ -1.97
SOK2YMR016C SCT1P32784 759 aa2.75□□□□□ -1.97
SOK2YMR016C YEL1P34225 687 aa2.75□□□□□ -1.97
SOK2YMR016C YKR051WP36142 418 aa2.75□□□□□ -1.97
SOK2YMR016C PPS1P38148 807 aa2.75□□□□□ -1.97
SOK2YMR016C OAF1P39720 1047 aaPredicted RBP2.75□□□□□ -1.97
SOK2YMR016C HLJ1P48353 224 aa2.75□□□□□ -1.97
SOK2YMR016C UBC9P50623 157 aaPredicted RBP2.75□□□□□ -1.97
SOK2YMR016C SNP1Q00916 300 aaPredicted RBP2.75□□□□□ -1.97
SOK2YMR016C HOF1Q05080 669 aa2.75□□□□□ -1.97
SOK2YMR016C COQ11Q05892 277 aa2.75□□□□□ -1.97
SOK2YMR016C ADY4Q05955 493 aa2.75□□□□□ -1.97
SOK2YMR016C YOR378WQ08902 515 aa2.75□□□□□ -1.97
SOK2YMR016C YLR149CQ99296 730 aa2.75□□□□□ -1.97
SOK2YMR016C CAF20P12962 161 aaKnown RBP2.74□□□□□ -1.97
SOK2YMR016C CDC43P18898 376 aa2.74□□□□□ -1.97
SOK2YMR016C MNN4P36044 1178 aa2.74□□□□□ -1.97
SOK2YMR016C GPP2P40106 250 aaKnown RBP2.74□□□□□ -1.97
SOK2YMR016C PMT3P47190 753 aa2.74□□□□□ -1.97
SOK2YMR016C MPH2P0CD99 609 aa2.74□□□□□ -1.97
SOK2YMR016C CCT5P40413 562 aaKnown RBP2.74□□□□□ -1.97
SOK2YMR016C IMO32P53219 342 aa2.74□□□□□ -1.97
SOK2YMR016C AFT2Q08957 416 aa2.74□□□□□ -1.97
SOK2YMR016C RPS21BQ3E754 87 aaKnown RBP2.74□□□□□ -1.97
SOK2YMR016C MRC1P25588 1096 aa2.73□□□□□ -1.97
SOK2YMR016C SFP1P32432 683 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms