RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C MCM6P53091 1017 aaKnown RBP2.72□□□□□ -1.97
SGD1YLR336C ERG5P54781 538 aa2.72□□□□□ -1.97
SGD1YLR336C YLR358CO13565 187 aa2.71□□□□□ -1.98
SGD1YLR336C CAD1P24813 409 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C CTF13P35203 478 aa2.71□□□□□ -1.98
SGD1YLR336C ENP1P38333 483 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C PAF1P38351 445 aa2.71□□□□□ -1.98
SGD1YLR336C TDA3P38758 523 aa2.71□□□□□ -1.98
SGD1YLR336C RPP1P38786 293 aa2.71□□□□□ -1.98
SGD1YLR336C SSZ1P38788 538 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C HXT6P39003 570 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C HXT7P39004 570 aa2.71□□□□□ -1.98
SGD1YLR336C CCT5P40413 562 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C GZF3P42944 551 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C RET2P43621 546 aa2.71□□□□□ -1.98
SGD1YLR336C PKH1Q03407 766 aa2.71□□□□□ -1.98
SGD1YLR336C YTM1Q12024 460 aaPredicted RBP2.71□□□□□ -1.98
SGD1YLR336C RPS21BQ3E754 87 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C YLR415CO13578 112 aa2.71□□□□□ -1.98
SGD1YLR336C RPS21AP0C0V8 87 aaKnown RBP2.71□□□□□ -1.98
SGD1YLR336C YGR153WP48238 217 aa2.71□□□□□ -1.98
SGD1YLR336C YBR071WP38243 211 aa2.7□□□□□ -1.98
SGD1YLR336C NUG1P40010 520 aaKnown RBP2.7□□□□□ -1.98
SGD1YLR336C BUL1P48524 976 aa2.7□□□□□ -1.98
SGD1YLR336C CLU1Q03690 1277 aaKnown RBP2.7□□□□□ -1.98
SGD1YLR336C ADE2P21264 571 aaKnown RBP2.7□□□□□ -1.98
SGD1YLR336C DCG1P32460 244 aa2.7□□□□□ -1.98
SGD1YLR336C MNN11P46985 422 aaKnown RBP2.7□□□□□ -1.98
SGD1YLR336C YJR039WP47107 1121 aa2.7□□□□□ -1.98
SGD1YLR336C PRP31P49704 494 aaPredicted RBP2.7□□□□□ -1.98
SGD1YLR336C MNN10P50108 393 aaKnown RBP2.7□□□□□ -1.98
SGD1YLR336C PHO23P50947 330 aa2.7□□□□□ -1.98
SGD1YLR336C COG6P53959 839 aa2.7□□□□□ -1.98
SGD1YLR336C TRM13Q12383 476 aa2.7□□□□□ -1.98
SGD1YLR336C TRM11Q12463 433 aa2.7□□□□□ -1.98
SGD1YLR336C STE11P23561 717 aa2.7□□□□□ -1.98
SGD1YLR336C AKL1P38080 1108 aaKnown RBP2.7□□□□□ -1.98
SGD1YLR336C SIC1P38634 284 aa2.7□□□□□ -1.98
SGD1YLR336C YHR202WP38887 602 aa2.7□□□□□ -1.98
SGD1YLR336C MPT5P39016 859 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SGD1YLR336C UBP5P39944 805 aa2.7□□□□□ -1.98
SGD1YLR336C ORC4P54791 529 aa2.7□□□□□ -1.98
SGD1YLR336C TGL5Q12043 749 aa2.7□□□□□ -1.98
SGD1YLR336C FAT1P38225 669 aa2.69□□□□□ -1.98
SGD1YLR336C YHR112CP38716 378 aa2.69□□□□□ -1.98
SGD1YLR336C GPP2P40106 250 aaKnown RBP2.69□□□□□ -1.98
SGD1YLR336C FKH2P41813 862 aa2.69□□□□□ -1.98
SGD1YLR336C ENB1Q08299 606 aa2.69□□□□□ -1.98
SGD1YLR336C PFK1P16861 987 aaKnown RBP2.69□□□□□ -1.98
SGD1YLR336C ERG6P25087 383 aaKnown RBP2.69□□□□□ -1.98
SGD1YLR336C MRC1P25588 1096 aa2.69□□□□□ -1.98
SGD1YLR336C SER1P33330 395 aaKnown RBP2.69□□□□□ -1.98
SGD1YLR336C MAL31P38156 614 aa2.69□□□□□ -1.98
SGD1YLR336C BEM4P39011 633 aa2.69□□□□□ -1.98
SGD1YLR336C TAF1P46677 1066 aa2.69□□□□□ -1.98
SGD1YLR336C ARG5,6Q01217 863 aa2.69□□□□□ -1.98
SGD1YLR336C PMA1P05030 918 aaKnown RBP2.68□□□□□ -1.98
SGD1YLR336C TRP4P07285 380 aaPredicted RBP2.68□□□□□ -1.98
SGD1YLR336C NGG1P32494 702 aa2.68□□□□□ -1.98
SGD1YLR336C OAF3P36023 863 aa2.68□□□□□ -1.98
SGD1YLR336C YBR259WP38338 688 aa2.68□□□□□ -1.98
SGD1YLR336C YNL195CP40168 261 aa2.68□□□□□ -1.98
SGD1YLR336C GID8P40208 455 aa2.68□□□□□ -1.98
SGD1YLR336C SET2P46995 733 aaKnown RBP2.68□□□□□ -1.98
SGD1YLR336C YBP2P53169 641 aa2.68□□□□□ -1.98
SGD1YLR336C TEX1P53851 422 aaKnown RBP2.68□□□□□ -1.98
SGD1YLR336C NRG1Q03125 231 aa2.68□□□□□ -1.98
SGD1YLR336C YHM2Q04013 314 aa2.68□□□□□ -1.98
SGD1YLR336C YLR407WQ06070 228 aa2.68□□□□□ -1.98
SGD1YLR336C HFI1Q12060 488 aa2.68□□□□□ -1.98
SGD1YLR336C CTS1P29029 562 aa2.68□□□□□ -1.98
SGD1YLR336C SEC65P29478 273 aa2.68□□□□□ -1.98
SGD1YLR336C PLC1P32383 869 aa2.68□□□□□ -1.98
SGD1YLR336C DID4P36108 232 aa2.68□□□□□ -1.98
SGD1YLR336C SHM2P37291 469 aaKnown RBP2.68□□□□□ -1.98
SGD1YLR336C DUG1P43616 481 aaKnown RBP2.68□□□□□ -1.98
SGD1YLR336C NIT2P47016 307 aa2.68□□□□□ -1.98
SGD1YLR336C RGC1Q06108 1083 aaKnown RBP2.68□□□□□ -1.98
SGD1YLR336C TRE2Q08693 809 aa2.68□□□□□ -1.98
SGD1YLR336C SWI6P09959 803 aa2.67□□□□□ -1.98
SGD1YLR336C IMG2P25642 146 aaPredicted RBP2.67□□□□□ -1.98
SGD1YLR336C TFC4P33339 1025 aa2.67□□□□□ -1.98
SGD1YLR336C APL2P36000 726 aaPredicted RBP2.67□□□□□ -1.98
SGD1YLR336C GPD1Q00055 391 aaKnown RBP2.67□□□□□ -1.98
SGD1YLR336C ISA1Q07821 250 aaPredicted RBP2.67□□□□□ -1.98
SGD1YLR336C GLN4P13188 809 aaKnown RBP2.67□□□□□ -1.98
SGD1YLR336C YKU70P32807 602 aa2.67□□□□□ -1.98
SGD1YLR336C APN2P38207 520 aa2.67□□□□□ -1.98
SGD1YLR336C PEX8P53248 589 aa2.67□□□□□ -1.98
SGD1YLR336C TGL2P54857 326 aa2.67□□□□□ -1.98
SGD1YLR336C RCR2Q03446 210 aaKnown RBP2.67□□□□□ -1.98
SGD1YLR336C HMO1Q03973 246 aaKnown RBP2.67□□□□□ -1.98
SGD1YLR336C YPS7Q06325 596 aa2.67□□□□□ -1.98
SGD1YLR336C ESC8Q08119 714 aa2.67□□□□□ -1.98
SGD1YLR336C APM4Q99186 491 aa2.67□□□□□ -1.98
SGD1YLR336C HRP1Q99383 534 aaKnown RBP2.67□□□□□ -1.98
SGD1YLR336C ATP12P22135 325 aa2.66□□□□□ -1.98
SGD1YLR336C AEP2P22136 580 aa2.66□□□□□ -1.98
SGD1YLR336C YBR053CP38235 358 aa2.66□□□□□ -1.98
SGD1YLR336C LYS9P38999 446 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms