RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	MTR3	P48240	250 aa	Predicted RBP	3.75	□□□□□ -1.81
RNP1	YLL046C	YLR149C	Q99296	730 aa		3.75	□□□□□ -1.81
RNP1	YLL046C	PET10	P36139	283 aa		3.74	□□□□□ -1.81
RNP1	YLL046C	RSP5	P39940	809 aa	Known RBP	3.74	□□□□□ -1.81
RNP1	YLL046C	SPF1	P39986	1215 aa	Known RBP	3.74	□□□□□ -1.81
RNP1	YLL046C	MEP2	P41948	499 aa		3.74	□□□□□ -1.81
RNP1	YLL046C	MTL1	P53214	551 aa		3.74	□□□□□ -1.81
RNP1	YLL046C	THI21	Q08975	551 aa		3.74	□□□□□ -1.81
RNP1	YLL046C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
RNP1	YLL046C	MVD1	P32377	396 aa	Known RBP	3.73	□□□□□ -1.81
RNP1	YLL046C	FMO1	P38866	432 aa		3.73	□□□□□ -1.81
RNP1	YLL046C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
RNP1	YLL046C	MRK1	P50873	501 aa		3.73	□□□□□ -1.81
RNP1	YLL046C	ATG4	P53867	494 aa		3.73	□□□□□ -1.81
RNP1	YLL046C	SLK19	Q08581	821 aa	Known RBP	3.73	□□□□□ -1.81
RNP1	YLL046C	STE4	P18851	423 aa		3.72	□□□□□ -1.81
RNP1	YLL046C	NUP1	P20676	1076 aa		3.72	□□□□□ -1.81
RNP1	YLL046C	CCR4	P31384	837 aa	Known RBP	3.72	□□□□□ -1.81
RNP1	YLL046C	HBN1	Q96VH4	193 aa		3.72	□□□□□ -1.81
RNP1	YLL046C	PHO11	P35842	467 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	PHO12	P38693	467 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	MUP3	P38734	546 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	LYS9	P38999	446 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	FHN1	P53279	174 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	JIP5	Q06214	492 aa	Predicted RBP	3.71	□□□□□ -1.82
RNP1	YLL046C	TDA5	Q06417	326 aa	Known RBP	3.71	□□□□□ -1.82
RNP1	YLL046C	UBX5	Q06682	500 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	MLH3	Q12083	715 aa		3.71	□□□□□ -1.82
RNP1	YLL046C	PGK1	P00560	416 aa	Known RBP	3.7	□□□□□ -1.82
RNP1	YLL046C	SET5	P38890	526 aa	Known RBP	3.7	□□□□□ -1.82
RNP1	YLL046C	ORC1	P54784	914 aa	Predicted RBP	3.7	□□□□□ -1.82
RNP1	YLL046C	RGC1	Q06108	1083 aa	Known RBP	3.7	□□□□□ -1.82
RNP1	YLL046C	FMP25	Q08023	583 aa		3.7	□□□□□ -1.82
RNP1	YLL046C	CIR2	Q08822	631 aa		3.7	□□□□□ -1.82
RNP1	YLL046C	NAP1	P25293	417 aa	Known RBP	3.69	□□□□□ -1.82
RNP1	YLL046C	NUP60	P39705	539 aa		3.69	□□□□□ -1.82
RNP1	YLL046C	UTP8	P53276	713 aa	Known RBP	3.69	□□□□□ -1.82
RNP1	YLL046C	CTK1	Q03957	528 aa	Known RBP	3.69	□□□□□ -1.82
RNP1	YLL046C	RPA135	P22138	1203 aa	Known RBP	3.68	□□□□□ -1.82
RNP1	YLL046C	EMC3	P36039	253 aa		3.68	□□□□□ -1.82
RNP1	YLL046C	ECM1	P39715	212 aa		3.68	□□□□□ -1.82
RNP1	YLL046C	GYP8	P43570	497 aa		3.68	□□□□□ -1.82
RNP1	YLL046C	PRP31	P49704	494 aa	Predicted RBP	3.68	□□□□□ -1.82
RNP1	YLL046C	ZIP2	P53061	704 aa		3.68	□□□□□ -1.82
RNP1	YLL046C	NOP7	P53261	605 aa	Known RBP	3.68	□□□□□ -1.82
RNP1	YLL046C	FMP30	Q02883	468 aa		3.68	□□□□□ -1.82
RNP1	YLL046C	SCT1	P32784	759 aa		3.67	□□□□□ -1.82
RNP1	YLL046C	VAC8	P39968	578 aa		3.67	□□□□□ -1.82
RNP1	YLL046C	YBP2	P53169	641 aa		3.67	□□□□□ -1.82
RNP1	YLL046C	YGR283C	P53336	341 aa	Predicted RBP	3.67	□□□□□ -1.82
RNP1	YLL046C	IOC4	Q04213	475 aa		3.67	□□□□□ -1.82
RNP1	YLL046C	EAF1	Q06337	982 aa		3.67	□□□□□ -1.82
RNP1	YLL046C	USV1	Q12132	391 aa		3.67	□□□□□ -1.82
RNP1	YLL046C	FUB1	P25659	250 aa		3.66	□□□□□ -1.82
RNP1	YLL046C	YHR112C	P38716	378 aa		3.66	□□□□□ -1.82
RNP1	YLL046C	SHR5	P41912	237 aa		3.66	□□□□□ -1.82
RNP1	YLL046C	YBR182C-A	Q8TGU6	64 aa		3.66	□□□□□ -1.82
RNP1	YLL046C	STE12	P13574	688 aa		3.65	□□□□□ -1.83
RNP1	YLL046C	THR1	P17423	357 aa	Known RBP	3.65	□□□□□ -1.83
RNP1	YLL046C	ADE2	P21264	571 aa	Known RBP	3.65	□□□□□ -1.83
RNP1	YLL046C	APN1	P22936	367 aa		3.65	□□□□□ -1.83
RNP1	YLL046C	GMH1	P36125	273 aa		3.65	□□□□□ -1.83
RNP1	YLL046C	ZRT2	Q12436	422 aa		3.65	□□□□□ -1.83
RNP1	YLL046C	ERG6	P25087	383 aa	Known RBP	3.64	□□□□□ -1.83
RNP1	YLL046C	RPL8B	P29453	256 aa	Known RBP	3.64	□□□□□ -1.83
RNP1	YLL046C	SET3	P36124	751 aa		3.64	□□□□□ -1.83
RNP1	YLL046C	UBP6	P43593	499 aa	Known RBP	3.64	□□□□□ -1.83
RNP1	YLL046C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
RNP1	YLL046C	ALD6	P54115	500 aa	Known RBP	3.64	□□□□□ -1.83
RNP1	YLL046C	REH1	Q06709	432 aa		3.64	□□□□□ -1.83
RNP1	YLL046C	HRP1	Q99383	534 aa	Known RBP	3.64	□□□□□ -1.83
RNP1	YLL046C	ERP6	P53198	216 aa		3.63	□□□□□ -1.83
RNP1	YLL046C	SNU71	P53207	620 aa	Known RBP	3.63	□□□□□ -1.83
RNP1	YLL046C	YDR514C	Q04408	483 aa		3.63	□□□□□ -1.83
RNP1	YLL046C	GEP3	Q08622	556 aa		3.63	□□□□□ -1.83
RNP1	YLL046C	DIF1	O13577	133 aa		3.62	□□□□□ -1.83
RNP1	YLL046C	ADE5,7	P07244	802 aa	Known RBP	3.62	□□□□□ -1.83
RNP1	YLL046C	SAT4	P25333	603 aa	Known RBP	3.62	□□□□□ -1.83
RNP1	YLL046C	KCC4	P25389	1037 aa		3.62	□□□□□ -1.83
RNP1	YLL046C	ARE1	P25628	610 aa		3.62	□□□□□ -1.83
RNP1	YLL046C	YMC1	P32331	307 aa		3.62	□□□□□ -1.83
RNP1	YLL046C	APL2	P36000	726 aa	Predicted RBP	3.62	□□□□□ -1.83
RNP1	YLL046C	TRZ1	P36159	838 aa	Predicted RBP	3.62	□□□□□ -1.83
RNP1	YLL046C	RLP7	P40693	322 aa	Known RBP	3.62	□□□□□ -1.83
RNP1	YLL046C	TAX4	P47030	604 aa		3.62	□□□□□ -1.83
RNP1	YLL046C	YMC2	P38087	329 aa		3.61	□□□□□ -1.83
RNP1	YLL046C	HXT16	P47185	567 aa		3.61	□□□□□ -1.83
RNP1	YLL046C	ZDS1	P50111	915 aa	Known RBP	3.61	□□□□□ -1.83
RNP1	YLL046C	SPC98	P53540	846 aa		3.61	□□□□□ -1.83
RNP1	YLL046C	ARG5,6	Q01217	863 aa		3.61	□□□□□ -1.83
RNP1	YLL046C	UGP1	P32861	499 aa	Known RBP	3.6	□□□□□ -1.83
RNP1	YLL046C	SPO75	Q07798	868 aa		3.6	□□□□□ -1.83
RNP1	YLL046C	MET7	Q08645	548 aa		3.6	□□□□□ -1.83
RNP1	YLL046C	GRX1	P25373	110 aa	Known RBP	3.59	□□□□□ -1.83
RNP1	YLL046C	CRP1	P38845	465 aa	Known RBP	3.59	□□□□□ -1.83
RNP1	YLL046C	PMC1	P38929	1173 aa	Predicted RBP	3.59	□□□□□ -1.83
RNP1	YLL046C	MIT1	P40002	666 aa		3.59	□□□□□ -1.83
RNP1	YLL046C	GET2	P40056	285 aa		3.59	□□□□□ -1.83
RNP1	YLL046C	STP1	Q00947	519 aa		3.59	□□□□□ -1.83
RNP1	YLL046C	YPL068C	Q02749	293 aa		3.59	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms