RNA–Protein interactions for RNA: YKL220C

FRE2, Transcript of Ferric reductase and cupric reductase, yeastyeast

Gene FRE2, Length 2,136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE2YKL220C CSE4P36012 229 aa3.04□□□□□ -1.92
FRE2YKL220C CUE2P36075 443 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C RDH54P38086 958 aa3.04□□□□□ -1.92
FRE2YKL220C ALG3P38179 458 aa3.04□□□□□ -1.92
FRE2YKL220C SMF2P38778 549 aa3.04□□□□□ -1.92
FRE2YKL220C YIL161WP40449 235 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C APS3P47064 194 aa3.04□□□□□ -1.92
FRE2YKL220C SSN8P47821 323 aa3.04□□□□□ -1.92
FRE2YKL220C LYS4P49367 693 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C LSC1P53598 329 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C MRX10Q05648 414 aa3.04□□□□□ -1.92
FRE2YKL220C PSR2Q07949 397 aa3.04□□□□□ -1.92
FRE2YKL220C AVL9Q12500 764 aa3.04□□□□□ -1.92
FRE2YKL220C MIS1P09440 975 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C SUP45P12385 437 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C PUT4P15380 627 aa3.04□□□□□ -1.92
FRE2YKL220C MET8P15807 274 aa3.04□□□□□ -1.92
FRE2YKL220C DBP3P20447 523 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C NPR1P22211 790 aa3.04□□□□□ -1.92
FRE2YKL220C RPC53P25441 422 aa3.04□□□□□ -1.92
FRE2YKL220C ICL1P28240 557 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C YJU2P28320 278 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C DBF20P32328 564 aa3.04□□□□□ -1.92
FRE2YKL220C VPH2P32341 215 aa3.04□□□□□ -1.92
FRE2YKL220C ORC2P32833 620 aa3.04□□□□□ -1.92
FRE2YKL220C UBC6P33296 250 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C CSE1P33307 960 aa3.04□□□□□ -1.92
FRE2YKL220C DUR3P33413 735 aa3.04□□□□□ -1.92
FRE2YKL220C YKR018CP36114 725 aa3.04□□□□□ -1.92
FRE2YKL220C POL12P38121 705 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C MGE1P38523 228 aa3.04□□□□□ -1.92
FRE2YKL220C CEM1P39525 442 aa3.04□□□□□ -1.92
FRE2YKL220C EDC3P39998 551 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C TPA1P40032 644 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C NAS2P40555 220 aa3.04□□□□□ -1.92
FRE2YKL220C ROK1P45818 564 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C UPF3P48412 387 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C UTP22P53254 1237 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C CAF130P53280 1122 aaPredicted RBP3.04□□□□□ -1.92
FRE2YKL220C YAP1802P53309 568 aa3.04□□□□□ -1.92
FRE2YKL220C MEP3P53390 489 aa3.04□□□□□ -1.92
FRE2YKL220C YNL193WP53870 558 aa3.04□□□□□ -1.92
FRE2YKL220C NAM8Q00539 523 aaKnown RBP3.04□□□□□ -1.92
FRE2YKL220C YMR187CQ03236 431 aa3.04□□□□□ -1.92
FRE2YKL220C ECM7Q06200 448 aa3.04□□□□□ -1.92
FRE2YKL220C ATG13Q06628 738 aa3.04□□□□□ -1.92
FRE2YKL220C YLR125WQ12138 136 aa3.04□□□□□ -1.92
FRE2YKL220C SWI1P09547 1314 aa3.03□□□□□ -1.92
FRE2YKL220C NCP1P16603 691 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C PRP28P23394 588 aa3.03□□□□□ -1.92
FRE2YKL220C NIP1P32497 812 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C RPN2P32565 945 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C PEP7P32609 515 aa3.03□□□□□ -1.92
FRE2YKL220C MRP4P32902 394 aa3.03□□□□□ -1.92
FRE2YKL220C VPS17P32913 551 aa3.03□□□□□ -1.92
FRE2YKL220C RPT5P33297 434 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C PET112P33893 541 aa3.03□□□□□ -1.92
FRE2YKL220C VPS35P34110 944 aa3.03□□□□□ -1.92
FRE2YKL220C UBP11P36026 717 aa3.03□□□□□ -1.92
FRE2YKL220C YBR071WP38243 211 aa3.03□□□□□ -1.92
FRE2YKL220C COS111P38308 924 aa3.03□□□□□ -1.92
FRE2YKL220C CBR1P38626 284 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C TIF4631P39935 952 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C GYP8P43570 497 aa3.03□□□□□ -1.92
FRE2YKL220C STU2P46675 888 aa3.03□□□□□ -1.92
FRE2YKL220C FYV8P46949 817 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C SNX4P47057 423 aa3.03□□□□□ -1.92
FRE2YKL220C CUZ1P53899 274 aa3.03□□□□□ -1.92
FRE2YKL220C PRO2P54885 456 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C CWC15Q03772 175 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C RRP17Q04031 235 aaPredicted RBP3.03□□□□□ -1.92
FRE2YKL220C KEL3Q08979 651 aaPredicted RBP3.03□□□□□ -1.92
FRE2YKL220C RRP6Q12149 733 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C APC11Q12157 165 aa3.03□□□□□ -1.92
FRE2YKL220C NOT5Q12514 560 aaPredicted RBP3.03□□□□□ -1.92
FRE2YKL220C SEC39Q12745 709 aa3.03□□□□□ -1.92
FRE2YKL220C PGA3Q12746 312 aaKnown RBP3.03□□□□□ -1.92
FRE2YKL220C ENO1P00924 437 aaKnown RBP3.02□□□□□ -1.93
FRE2YKL220C CYT1P07143 309 aa3.02□□□□□ -1.93
FRE2YKL220C ERR1P0CX10 437 aa3.02□□□□□ -1.93
FRE2YKL220C ERR2P0CX11 437 aa3.02□□□□□ -1.93
FRE2YKL220C DAT1P13483 248 aaKnown RBP3.02□□□□□ -1.93
FRE2YKL220C HOM2P13663 365 aaKnown RBP3.02□□□□□ -1.93
FRE2YKL220C POT1P27796 417 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
FRE2YKL220C SEC21P32074 935 aaKnown RBP3.02□□□□□ -1.93
FRE2YKL220C THI4P32318 326 aa3.02□□□□□ -1.93
FRE2YKL220C AFR1P33304 620 aa3.02□□□□□ -1.93
FRE2YKL220C HCS1P34243 683 aa3.02□□□□□ -1.93
FRE2YKL220C MRP8P35719 219 aa3.02□□□□□ -1.93
FRE2YKL220C GRS1P38088 690 aaKnown RBP3.02□□□□□ -1.93
FRE2YKL220C FTH1P38310 465 aa3.02□□□□□ -1.93
FRE2YKL220C GEM1P39722 662 aa3.02□□□□□ -1.93
FRE2YKL220C SAW1P39735 261 aa3.02□□□□□ -1.93
FRE2YKL220C BUD16P39988 312 aa3.02□□□□□ -1.93
FRE2YKL220C ZRG8P40021 1076 aa3.02□□□□□ -1.93
FRE2YKL220C MKT1P40850 830 aaKnown RBP3.02□□□□□ -1.93
FRE2YKL220C AXL1P40851 1208 aa3.02□□□□□ -1.93
FRE2YKL220C PHB1P40961 287 aa3.02□□□□□ -1.93
FRE2YKL220C THI12P42883 340 aa3.02□□□□□ -1.93
FRE2YKL220C THI5P43534 340 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms