RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W UBP2Q01476 1272 aa6.96□□□□□ -1.3
PRE3YJL001W MFM1Q02783 413 aa6.96□□□□□ -1.3
PRE3YJL001W DOT1Q04089 582 aaKnown RBP6.96□□□□□ -1.3
PRE3YJL001W HCR1Q05775 265 aaKnown RBP6.96□□□□□ -1.3
PRE3YJL001W EMG1Q06287 252 aaKnown RBP6.96□□□□□ -1.3
PRE3YJL001W HXK1P04806 485 aaKnown RBP6.95□□□□□ -1.3
PRE3YJL001W CAN1P04817 590 aa6.95□□□□□ -1.3
PRE3YJL001W CLN3P13365 580 aa6.95□□□□□ -1.3
PRE3YJL001W PEX1P24004 1043 aa6.95□□□□□ -1.3
PRE3YJL001W CSE2P33308 149 aa6.95□□□□□ -1.3
PRE3YJL001W ECM2P38241 364 aaKnown RBP6.95□□□□□ -1.3
PRE3YJL001W ARP1P38696 384 aa6.95□□□□□ -1.3
PRE3YJL001W OCA5P38738 679 aa6.95□□□□□ -1.3
PRE3YJL001W FAA3P39002 694 aa6.95□□□□□ -1.3
PRE3YJL001W RET3P53600 189 aa6.95□□□□□ -1.3
PRE3YJL001W SMC5Q08204 1093 aa6.95□□□□□ -1.3
PRE3YJL001W YOR022CQ12204 715 aa6.95□□□□□ -1.3
PRE3YJL001W ADE4P04046 510 aaKnown RBP6.94□□□□□ -1.3
PRE3YJL001W GLN3P18494 730 aa6.94□□□□□ -1.3
PRE3YJL001W CLN2P20438 545 aa6.94□□□□□ -1.3
PRE3YJL001W HCA4P20448 770 aaKnown RBP6.94□□□□□ -1.3
PRE3YJL001W SWI4P25302 1093 aaKnown RBP6.94□□□□□ -1.3
PRE3YJL001W BMH2P34730 273 aaKnown RBP6.94□□□□□ -1.3
PRE3YJL001W CCL1P37366 393 aa6.94□□□□□ -1.3
PRE3YJL001W RIM4P38741 713 aa6.94□□□□□ -1.3
PRE3YJL001W YIL165CP40446 119 aa6.94□□□□□ -1.3
PRE3YJL001W LAM5P43560 674 aa6.94□□□□□ -1.3
PRE3YJL001W BIO5P53744 561 aaKnown RBP6.94□□□□□ -1.3
PRE3YJL001W DSE4P53753 1117 aa6.94□□□□□ -1.3
PRE3YJL001W YLR257WQ06146 321 aaKnown RBP6.94□□□□□ -1.3
PRE3YJL001W OPT2Q06593 877 aa6.94□□□□□ -1.3
PRE3YJL001W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
PRE3YJL001W PIN2Q12057 282 aa6.94□□□□□ -1.3
PRE3YJL001W RRD2Q12461 358 aa6.94□□□□□ -1.3
PRE3YJL001W COX4P04037 155 aa6.93□□□□□ -1.3
PRE3YJL001W PUP3P25451 205 aaKnown RBP6.93□□□□□ -1.3
PRE3YJL001W PET112P33893 541 aa6.93□□□□□ -1.3
PRE3YJL001W ACO2P39533 789 aa6.93□□□□□ -1.3
PRE3YJL001W SPO22P40511 975 aa6.93□□□□□ -1.3
PRE3YJL001W VID28P40547 921 aa6.93□□□□□ -1.3
PRE3YJL001W EPL1P43572 832 aa6.93□□□□□ -1.3
PRE3YJL001W TPO2P53283 614 aa6.93□□□□□ -1.3
PRE3YJL001W VPS16Q03308 798 aa6.93□□□□□ -1.3
PRE3YJL001W MRI1Q06489 411 aaKnown RBP6.93□□□□□ -1.3
PRE3YJL001W BEM2P39960 2167 aaKnown RBP6.93□□□□□ -1.3
PRE3YJL001W MNR2P35724 969 aa6.92□□□□□ -1.3
PRE3YJL001W GLY1P37303 387 aaKnown RBP6.92□□□□□ -1.3
PRE3YJL001W MRPL16P38064 232 aa6.92□□□□□ -1.3
PRE3YJL001W HXT13P39924 564 aa6.92□□□□□ -1.3
PRE3YJL001W MRPS18P42847 217 aa6.92□□□□□ -1.3
PRE3YJL001W CTR9P89105 1077 aa6.92□□□□□ -1.3
PRE3YJL001W CSM3Q04659 317 aa6.92□□□□□ -1.3
PRE3YJL001W SRD1P09007 221 aa6.91□□□□□ -1.3
PRE3YJL001W GSY1P23337 708 aa6.91□□□□□ -1.3
PRE3YJL001W RSA4P25382 515 aaKnown RBP6.91□□□□□ -1.3
PRE3YJL001W PEX2P32800 271 aa6.91□□□□□ -1.3
PRE3YJL001W NCL1P38205 684 aaKnown RBP6.91□□□□□ -1.3
PRE3YJL001W VAC8P39968 578 aa6.91□□□□□ -1.3
PRE3YJL001W AVT1P47082 602 aa6.91□□□□□ -1.3
PRE3YJL001W MNP1P53163 194 aaPredicted RBP6.91□□□□□ -1.3
PRE3YJL001W MCD1Q12158 566 aa6.91□□□□□ -1.3
PRE3YJL001W PKH2Q12236 1081 aaKnown RBP6.91□□□□□ -1.3
PRE3YJL001W RPP1AP05318 106 aaPredicted RBP6.9□□□□□ -1.3
PRE3YJL001W MATALPHA2P0CY08 210 aa6.9□□□□□ -1.3
PRE3YJL001W HMLALPHA2P0CY09 210 aa6.9□□□□□ -1.3
PRE3YJL001W PYC2P32327 1180 aaKnown RBP6.9□□□□□ -1.3
PRE3YJL001W DPH2P32461 534 aa6.9□□□□□ -1.3
PRE3YJL001W OPY1P38271 328 aa6.9□□□□□ -1.3
PRE3YJL001W RPN10P38886 268 aaKnown RBP6.9□□□□□ -1.3
PRE3YJL001W MON1P53129 644 aa6.9□□□□□ -1.3
PRE3YJL001W YNR040WP53736 256 aa6.9□□□□□ -1.3
PRE3YJL001W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31 RIP-Chip
PRE3YJL001W SPE1P08432 466 aa6.89□□□□□ -1.31
PRE3YJL001W CDC6P09119 513 aa6.89□□□□□ -1.31
PRE3YJL001W TCP1P12612 559 aaKnown RBP6.89□□□□□ -1.31
PRE3YJL001W VPS1P21576 704 aaKnown RBP6.89□□□□□ -1.31
PRE3YJL001W PRE9P23638 258 aaKnown RBP6.89□□□□□ -1.31
PRE3YJL001W MCM5P29496 775 aaKnown RBP6.89□□□□□ -1.31
PRE3YJL001W HEL1P36113 551 aa6.89□□□□□ -1.31
PRE3YJL001W OSH7P38755 437 aa6.89□□□□□ -1.31
PRE3YJL001W ULP2P40537 1034 aaPredicted RBP6.89□□□□□ -1.31
PRE3YJL001W NUT1P53114 1132 aa6.89□□□□□ -1.31
PRE3YJL001W YGL081WP53156 320 aa6.89□□□□□ -1.31
PRE3YJL001W CWC24P53769 259 aa6.89□□□□□ -1.31
PRE3YJL001W CAF120P53836 1060 aa6.89□□□□□ -1.31
PRE3YJL001W IES4Q08561 116 aa6.89□□□□□ -1.31
PRE3YJL001W SLK19Q08581 821 aaKnown RBP6.89□□□□□ -1.31
PRE3YJL001W CEX1Q12453 761 aa6.89□□□□□ -1.31
PRE3YJL001W TOM70P07213 617 aaKnown RBP6.88□□□□□ -1.31
PRE3YJL001W RPL40AP0CH08 128 aaKnown RBP6.88□□□□□ -1.31
PRE3YJL001W RPL40BP0CH09 128 aaKnown RBP6.88□□□□□ -1.31
PRE3YJL001W CUP1-1P0CX80 61 aa6.88□□□□□ -1.31
PRE3YJL001W CUP1-2P0CX81 61 aa6.88□□□□□ -1.31
PRE3YJL001W THR4P16120 514 aaKnown RBP6.88□□□□□ -1.31
PRE3YJL001W RAD27P26793 382 aa6.88□□□□□ -1.31
PRE3YJL001W COY1P34237 679 aa6.88□□□□□ -1.31
PRE3YJL001W HMT1P38074 348 aa6.88□□□□□ -1.31
PRE3YJL001W MRX3P38172 270 aa6.88□□□□□ -1.31
PRE3YJL001W STT3P39007 718 aaKnown RBP6.88□□□□□ -1.31
PRE3YJL001W RTT102P53330 157 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms