RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W TEA1P47988 759 aa2.53□□□□□ -2
TRA1YHR099W TRS130Q03660 1102 aa2.53□□□□□ -2
TRA1YHR099W SSQ1Q05931 657 aaPredicted RBP2.53□□□□□ -2
TRA1YHR099W RGR1P19263 1082 aa2.53□□□□□ -2
TRA1YHR099W PUP3P25451 205 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W BRN1P38170 754 aa2.53□□□□□ -2
TRA1YHR099W MBP1P39678 833 aa2.53□□□□□ -2
TRA1YHR099W PRE6P40303 254 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W YTA12P40341 825 aa2.53□□□□□ -2
TRA1YHR099W SNF12P53628 566 aa2.53□□□□□ -2
TRA1YHR099W RNH1Q04740 348 aa2.53□□□□□ -2
TRA1YHR099W CTI6Q08923 506 aa2.53□□□□□ -2
TRA1YHR099W YBL010CP32788 280 aa2.53□□□□□ -2
TRA1YHR099W ARC19P33204 171 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W GUS1P46655 708 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
TRA1YHR099W POL32P47110 350 aa2.53□□□□□ -2
TRA1YHR099W SPO1P53541 631 aa2.53□□□□□ -2
TRA1YHR099W CWC21Q03375 135 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W NNT1Q05874 261 aa2.53□□□□□ -2
TRA1YHR099W GAS2Q06135 555 aa2.53□□□□□ -2
TRA1YHR099W AIM6Q07716 390 aa2.53□□□□□ -2
TRA1YHR099W IRC23Q08416 157 aa2.53□□□□□ -2
TRA1YHR099W ASF2P32448 525 aaPredicted RBP2.53□□□□□ -2
TRA1YHR099W MDE1P47095 244 aa2.53□□□□□ -2
TRA1YHR099W CUL3P53202 744 aa2.53□□□□□ -2
TRA1YHR099W YNL035CP53962 389 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W ARP4P80428 489 aa2.53□□□□□ -2
TRA1YHR099W SNF8Q12483 233 aa2.53□□□□□ -2
TRA1YHR099W EUG1P32474 517 aa2.53□□□□□ -2
TRA1YHR099W YER137CP40083 148 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W RTS3P53289 263 aa2.53□□□□□ -2
TRA1YHR099W YNR061CP53747 219 aa2.53□□□□□ -2
TRA1YHR099W YNL058CP53947 316 aa2.53□□□□□ -2
TRA1YHR099W RLI1Q03195 608 aaKnown RBP2.53□□□□□ -2
TRA1YHR099W YML079WQ03629 201 aa2.53□□□□□ -2
TRA1YHR099W PPM2Q08282 695 aa2.53□□□□□ -2
TRA1YHR099W VPS15P22219 1454 aa2.53□□□□□ -2
TRA1YHR099W CYM1P32898 989 aa2.53□□□□□ -2
TRA1YHR099W GIC1P38785 314 aa2.53□□□□□ -2
TRA1YHR099W ALP1P38971 573 aa2.53□□□□□ -2
TRA1YHR099W RCY1P39531 840 aa2.53□□□□□ -2
TRA1YHR099W MUB1Q03162 620 aa2.53□□□□□ -2
TRA1YHR099W YDR179W-AQ03983 463 aa2.53□□□□□ -2
TRA1YHR099W SCS22Q6Q595 175 aa2.53□□□□□ -2
TRA1YHR099W GAL4P04386 881 aa2.53□□□□□ -2
TRA1YHR099W SIR3P06701 978 aa2.53□□□□□ -2
TRA1YHR099W YKL063CP35725 167 aa2.53□□□□□ -2
TRA1YHR099W SLT2Q00772 484 aa2.53□□□□□ -2
TRA1YHR099W ULP1Q02724 621 aa2.53□□□□□ -2
TRA1YHR099W SSY1Q03770 852 aa2.53□□□□□ -2
TRA1YHR099W SGD1Q06132 899 aa2.53□□□□□ -2
TRA1YHR099W ENO1P00924 437 aaKnown RBP2.53□□□□□ -2.01
TRA1YHR099W SLY1P22213 666 aa2.53□□□□□ -2.01
TRA1YHR099W AAD3P25612 363 aa2.53□□□□□ -2.01
TRA1YHR099W AXL1P40851 1208 aa2.53□□□□□ -2.01
TRA1YHR099W TRS85P46944 698 aa2.53□□□□□ -2.01
TRA1YHR099W IML2P47031 731 aa2.53□□□□□ -2.01
TRA1YHR099W ARG7Q04728 441 aa2.53□□□□□ -2.01
TRA1YHR099W SPO77Q06134 477 aa2.53□□□□□ -2.01
TRA1YHR099W YLR031WQ07978 186 aa2.53□□□□□ -2.01
TRA1YHR099W SIR4P11978 1358 aa2.53□□□□□ -2.01
TRA1YHR099W TUB2P02557 457 aaKnown RBP2.53□□□□□ -2.01
TRA1YHR099W REP2P03872 296 aa2.53□□□□□ -2.01
TRA1YHR099W CPA2P03965 1118 aaKnown RBP2.53□□□□□ -2.01
TRA1YHR099W RAD27P26793 382 aa2.53□□□□□ -2.01
TRA1YHR099W KIP1P28742 1111 aa2.53□□□□□ -2.01
TRA1YHR099W SLA1P32790 1244 aa2.53□□□□□ -2.01
TRA1YHR099W MRPS18P42847 217 aa2.53□□□□□ -2.01
TRA1YHR099W LSB1P53281 241 aa2.53□□□□□ -2.01
TRA1YHR099W BRE5P53741 515 aaKnown RBP2.53□□□□□ -2.01
TRA1YHR099W MRP51Q02950 344 aa2.53□□□□□ -2.01
TRA1YHR099W YML020WQ03722 664 aa2.53□□□□□ -2.01
TRA1YHR099W RAD34Q06665 692 aa2.53□□□□□ -2.01
TRA1YHR099W EFG1Q3E705 233 aaKnown RBP2.53□□□□□ -2.01
TRA1YHR099W DNF1P32660 1571 aa2.52□□□□□ -2.01
TRA1YHR099W HEL1P36113 551 aa2.52□□□□□ -2.01
TRA1YHR099W DSF2P38213 736 aa2.52□□□□□ -2.01
TRA1YHR099W EHT1P38295 451 aa2.52□□□□□ -2.01
TRA1YHR099W ATM1P40416 690 aa2.52□□□□□ -2.01
TRA1YHR099W EMP47P43555 445 aa2.52□□□□□ -2.01
TRA1YHR099W BUL2Q03758 920 aaKnown RBP2.52□□□□□ -2.01
TRA1YHR099W SIZ1Q04195 904 aa2.52□□□□□ -2.01
TRA1YHR099W RAD7P06779 565 aa2.52□□□□□ -2.01
TRA1YHR099W BIO2P32451 375 aa2.52□□□□□ -2.01
TRA1YHR099W PPX1P38698 397 aa2.52□□□□□ -2.01
TRA1YHR099W YMR134WP40207 237 aa2.52□□□□□ -2.01
TRA1YHR099W SNX4P47057 423 aa2.52□□□□□ -2.01
TRA1YHR099W VID30P53076 958 aa2.52□□□□□ -2.01
TRA1YHR099W NOP19P53317 196 aaPredicted RBP2.52□□□□□ -2.01
TRA1YHR099W YML131WQ03102 365 aa2.52□□□□□ -2.01
TRA1YHR099W ECM11Q04110 302 aa2.52□□□□□ -2.01
TRA1YHR099W PYC1P11154 1178 aaKnown RBP2.52□□□□□ -2.01
TRA1YHR099W SDS22P36047 338 aa2.52□□□□□ -2.01
TRA1YHR099W ERC1P38767 581 aa2.52□□□□□ -2.01
TRA1YHR099W MDJ2P42834 146 aa2.52□□□□□ -2.01
TRA1YHR099W HPC2Q01448 625 aa2.52□□□□□ -2.01
TRA1YHR099W ATG20Q07528 640 aa2.52□□□□□ -2.01
TRA1YHR099W YEL077CQ3E7X8 1277 aa2.52□□□□□ -2.01
TRA1YHR099W PEP4P07267 405 aaKnown RBP2.52□□□□□ -2.01
TRA1YHR099W PWP1P21304 576 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms