RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W PYC1P11154 1178 aaKnown RBP4.33□□□□□ -1.72
RPF1YHR088W ADY2P25613 283 aa4.33□□□□□ -1.72
RPF1YHR088W HIR1P32479 840 aa4.33□□□□□ -1.72
RPF1YHR088W YJL206CP39529 758 aa4.33□□□□□ -1.72
RPF1YHR088W TEX1P53851 422 aaKnown RBP4.33□□□□□ -1.72
RPF1YHR088W ASM4Q05166 528 aa4.33□□□□□ -1.72
RPF1YHR088W YKL033W-AQ86ZR7 236 aa4.33□□□□□ -1.72
RPF1YHR088W SPC29P33419 253 aa4.32□□□□□ -1.72
RPF1YHR088W YHR020WP38708 688 aaKnown RBP4.32□□□□□ -1.72
RPF1YHR088W ARG2P40360 574 aa4.32□□□□□ -1.72
RPF1YHR088W NDC80P40460 691 aa4.32□□□□□ -1.72
RPF1YHR088W HXT16P47185 567 aa4.32□□□□□ -1.72
RPF1YHR088W CTK1Q03957 528 aaKnown RBP4.32□□□□□ -1.72
RPF1YHR088W SPO11P23179 398 aa4.31□□□□□ -1.72
RPF1YHR088W PEX2P32800 271 aa4.31□□□□□ -1.72
RPF1YHR088W APL2P36000 726 aaPredicted RBP4.31□□□□□ -1.72
RPF1YHR088W APT2P36973 181 aa4.31□□□□□ -1.72
RPF1YHR088W CTR1P49573 406 aa4.31□□□□□ -1.72
RPF1YHR088W PRP31P49704 494 aaPredicted RBP4.31□□□□□ -1.72
RPF1YHR088W CLF1Q12309 687 aaPredicted RBP4.31□□□□□ -1.72
RPF1YHR088W PHR1P05066 565 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
RPF1YHR088W GAL11P19659 1081 aa4.3□□□□□ -1.72
RPF1YHR088W GLG1P36143 616 aa4.3□□□□□ -1.72
RPF1YHR088W BET3P36149 193 aa4.3□□□□□ -1.72
RPF1YHR088W TRZ1P36159 838 aaPredicted RBP4.3□□□□□ -1.72
RPF1YHR088W BDH2P39713 417 aa4.3□□□□□ -1.72
RPF1YHR088W MCM21Q06675 368 aa4.3□□□□□ -1.72
RPF1YHR088W CAN1P04817 590 aa4.29□□□□□ -1.72
RPF1YHR088W ALY2P47029 1046 aa4.29□□□□□ -1.72
RPF1YHR088W NOP7P53261 605 aaKnown RBP4.29□□□□□ -1.72
RPF1YHR088W ORC4P54791 529 aa4.29□□□□□ -1.72
RPF1YHR088W AFT2Q08957 416 aa4.29□□□□□ -1.72
RPF1YHR088W FLO10P36170 1169 aa4.28□□□□□ -1.72
RPF1YHR088W NUP60P39705 539 aa4.28□□□□□ -1.72
RPF1YHR088W RSP5P39940 809 aaKnown RBP4.28□□□□□ -1.72
RPF1YHR088W YEL020CP39994 560 aa4.28□□□□□ -1.72
RPF1YHR088W CCT7P42943 550 aaKnown RBP4.28□□□□□ -1.72
RPF1YHR088W ATG4P53867 494 aa4.28□□□□□ -1.72
RPF1YHR088W ARG5,6Q01217 863 aa4.28□□□□□ -1.72
RPF1YHR088W BNA2P47125 453 aa4.27□□□□□ -1.73
RPF1YHR088W MVD1P32377 396 aaKnown RBP4.26□□□□□ -1.73
RPF1YHR088W MRK1P50873 501 aa4.26□□□□□ -1.73
RPF1YHR088W PAN2P53010 1115 aaPredicted RBP4.26□□□□□ -1.73
RPF1YHR088W RTA1P53047 317 aa4.26□□□□□ -1.73
RPF1YHR088W HUL5P53119 910 aa4.26□□□□□ -1.73
RPF1YHR088W FHN1P53279 174 aa4.26□□□□□ -1.73
RPF1YHR088W ADE2P21264 571 aaKnown RBP4.25□□□□□ -1.73
RPF1YHR088W PER1P25625 357 aa4.25□□□□□ -1.73
RPF1YHR088W CCR4P31384 837 aaKnown RBP4.25□□□□□ -1.73
RPF1YHR088W YHR112CP38716 378 aa4.25□□□□□ -1.73
RPF1YHR088W MIP6P38760 659 aaKnown RBP4.25□□□□□ -1.73
RPF1YHR088W FMO1P38866 432 aa4.25□□□□□ -1.73
RPF1YHR088W PAC2P39937 518 aa4.25□□□□□ -1.73
RPF1YHR088W CHZ1P40019 153 aaPredicted RBP4.25□□□□□ -1.73
RPF1YHR088W TY4A-JP47023 414 aa4.25□□□□□ -1.73
RPF1YHR088W MTL1P53214 551 aa4.25□□□□□ -1.73
RPF1YHR088W REC102Q02721 264 aa4.25□□□□□ -1.73
RPF1YHR088W ICT1Q12385 394 aa4.25□□□□□ -1.73
RPF1YHR088W STI1P15705 589 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
RPF1YHR088W ORC2P32833 620 aa4.24□□□□□ -1.73
RPF1YHR088W MTC2P34246 357 aa4.24□□□□□ -1.73
RPF1YHR088W SFB3P38810 929 aa4.24□□□□□ -1.73
RPF1YHR088W RPN10P38886 268 aaKnown RBP4.24□□□□□ -1.73
RPF1YHR088W YFL052WP43551 465 aa4.24□□□□□ -1.73
RPF1YHR088W YDR338CQ05497 695 aa4.24□□□□□ -1.73
RPF1YHR088W THI7Q05998 598 aa4.24□□□□□ -1.73
RPF1YHR088W EMP70P32802 667 aa4.23□□□□□ -1.73
RPF1YHR088W LYS9P38999 446 aa4.23□□□□□ -1.73
RPF1YHR088W HMO1Q03973 246 aaKnown RBP4.23□□□□□ -1.73
RPF1YHR088W MRI1Q06489 411 aaKnown RBP4.23□□□□□ -1.73
RPF1YHR088W MDM10P18409 493 aa4.22□□□□□ -1.73
RPF1YHR088W STO1P34160 861 aaKnown RBP4.22□□□□□ -1.73
RPF1YHR088W PHO11P35842 467 aa4.22□□□□□ -1.73
RPF1YHR088W UBS1P38290 277 aa4.22□□□□□ -1.73
RPF1YHR088W PHO12P38693 467 aa4.22□□□□□ -1.73
RPF1YHR088W GDH3P39708 457 aa4.22□□□□□ -1.73
RPF1YHR088W UBC9P50623 157 aaPredicted RBP4.22□□□□□ -1.73
RPF1YHR088W VPS34P22543 875 aa4.21□□□□□ -1.74
RPF1YHR088W PEX1P24004 1043 aa4.21□□□□□ -1.74
RPF1YHR088W CRP1P38845 465 aaKnown RBP4.21□□□□□ -1.74
RPF1YHR088W GID8P40208 455 aa4.21□□□□□ -1.74
RPF1YHR088W CAF16P43569 289 aa4.21□□□□□ -1.74
RPF1YHR088W SEC5P89102 971 aa4.21□□□□□ -1.74
RPF1YHR088W SNP1Q00916 300 aaPredicted RBP4.21□□□□□ -1.74
RPF1YHR088W SLK19Q08581 821 aaKnown RBP4.21□□□□□ -1.74
RPF1YHR088W ZRT2Q12436 422 aa4.21□□□□□ -1.74
RPF1YHR088W YLR149CQ99296 730 aa4.21□□□□□ -1.74
RPF1YHR088W HRP1Q99383 534 aaKnown RBP4.21□□□□□ -1.74
RPF1YHR088W TMT1P32643 299 aa4.2□□□□□ -1.74
RPF1YHR088W MCD4P36051 919 aa4.2□□□□□ -1.74
RPF1YHR088W MUP3P38734 546 aa4.2□□□□□ -1.74
RPF1YHR088W HRB1P38922 454 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
RPF1YHR088W NPY1P53164 384 aa4.2□□□□□ -1.74
RPF1YHR088W SEG1Q04279 960 aa4.2□□□□□ -1.74
RPF1YHR088W NSE3Q05541 303 aa4.2□□□□□ -1.74
RPF1YHR088W DIA2Q08496 732 aaPredicted RBP4.2□□□□□ -1.74
RPF1YHR088W ABF1P14164 731 aa4.19□□□□□ -1.74
RPF1YHR088W THR1P17423 357 aaKnown RBP4.19□□□□□ -1.74
RPF1YHR088W GSY1P23337 708 aa4.19□□□□□ -1.74
RPF1YHR088W KCC4P25389 1037 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms