RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C KIP1P28742 1111 aa7.91□□□□□ -1.14
PUP2YGR253C PIN4P34217 668 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
PUP2YGR253C PRX1P34227 261 aaKnown RBP7.91□□□□□ -1.14
PUP2YGR253C YBR056WP38081 501 aa7.91□□□□□ -1.14
PUP2YGR253C UTP8P53276 713 aaKnown RBP7.91□□□□□ -1.14
PUP2YGR253C VPS20Q04272 221 aa7.91□□□□□ -1.14
PUP2YGR253C YBL029C-AQ3E756 94 aa7.91□□□□□ -1.14
PUP2YGR253C AGP2P38090 596 aa7.9□□□□□ -1.14
PUP2YGR253C YBL036CP38197 257 aa7.9□□□□□ -1.14
PUP2YGR253C GYP8P43570 497 aa7.9□□□□□ -1.14
PUP2YGR253C IES1P43579 692 aa7.9□□□□□ -1.14
PUP2YGR253C LSB3P43603 459 aaKnown RBP7.9□□□□□ -1.14
PUP2YGR253C TMN2Q04562 672 aa7.9□□□□□ -1.14
PUP2YGR253C PRM6Q04705 352 aa7.9□□□□□ -1.14
PUP2YGR253C YPQ1Q12010 308 aa7.9□□□□□ -1.14
PUP2YGR253C MSB2P32334 1306 aa7.89□□□□□ -1.15
PUP2YGR253C CET1O13297 549 aaPredicted RBP7.89□□□□□ -1.15
PUP2YGR253C RDS1P25611 832 aa7.89□□□□□ -1.15
PUP2YGR253C MSH2P25847 964 aa7.89□□□□□ -1.15
PUP2YGR253C RAD16P31244 790 aa7.89□□□□□ -1.15
PUP2YGR253C ISF1P32488 338 aa7.89□□□□□ -1.15
PUP2YGR253C KTR4P38131 464 aa7.89□□□□□ -1.15
PUP2YGR253C SHE3P38272 425 aaKnown RBP7.89□□□□□ -1.15
PUP2YGR253C NEM1P38757 446 aa7.89□□□□□ -1.15
PUP2YGR253C BTT1P40314 149 aaPredicted RBP7.89□□□□□ -1.15
PUP2YGR253C DAS1P47005 663 aa7.89□□□□□ -1.15
PUP2YGR253C ALT1P52893 592 aa7.89□□□□□ -1.15
PUP2YGR253C TUB4P53378 473 aa7.89□□□□□ -1.15
PUP2YGR253C YPR084WQ06821 456 aa7.89□□□□□ -1.15
PUP2YGR253C YOR238WQ08634 303 aa7.89□□□□□ -1.15
PUP2YGR253C MPD2Q99316 277 aa7.89□□□□□ -1.15
PUP2YGR253C CUP1-1P0CX80 61 aa7.88□□□□□ -1.15
PUP2YGR253C CUP1-2P0CX81 61 aa7.88□□□□□ -1.15
PUP2YGR253C NAT1P12945 854 aaKnown RBP7.88□□□□□ -1.15
PUP2YGR253C PPH22P23595 377 aa7.88□□□□□ -1.15
PUP2YGR253C OXP1P28273 1286 aa7.88□□□□□ -1.15
PUP2YGR253C TRK2P28584 889 aa7.88□□□□□ -1.15
PUP2YGR253C BMH1P29311 267 aaKnown RBP7.88□□□□□ -1.15
PUP2YGR253C TKL2P33315 681 aa7.88□□□□□ -1.15
PUP2YGR253C TSA1P34760 196 aaKnown RBP7.88□□□□□ -1.15
PUP2YGR253C YKR051WP36142 418 aa7.88□□□□□ -1.15
PUP2YGR253C NMD3P38861 518 aaKnown RBP7.88□□□□□ -1.15
PUP2YGR253C SNF7P39929 240 aaKnown RBP7.88□□□□□ -1.15
PUP2YGR253C FTR1P40088 404 aa7.88□□□□□ -1.15
PUP2YGR253C LCB2P40970 561 aa7.88□□□□□ -1.15
PUP2YGR253C RSM26P47141 266 aa7.88□□□□□ -1.15
PUP2YGR253C PEX14P53112 341 aa7.88□□□□□ -1.15
PUP2YGR253C CWC24P53769 259 aa7.88□□□□□ -1.15
PUP2YGR253C NIS1P53939 407 aa7.88□□□□□ -1.15
PUP2YGR253C IMP4P53941 290 aaKnown RBP7.88□□□□□ -1.15
PUP2YGR253C WAR1Q03631 944 aa7.88□□□□□ -1.15
PUP2YGR253C GPM2Q12008 311 aa7.88□□□□□ -1.15
PUP2YGR253C MTF1P14908 341 aaKnown RBP7.87□□□□□ -1.15
PUP2YGR253C CDC15P27636 974 aa7.87□□□□□ -1.15
PUP2YGR253C MET4P32389 672 aa7.87□□□□□ -1.15
PUP2YGR253C HIR1P32479 840 aa7.87□□□□□ -1.15
PUP2YGR253C CHS6P40955 746 aa7.87□□□□□ -1.15
PUP2YGR253C DON1Q05610 365 aa7.87□□□□□ -1.15
PUP2YGR253C BSP1Q06604 576 aa7.87□□□□□ -1.15
PUP2YGR253C TSR1Q07381 788 aaKnown RBP7.87□□□□□ -1.15
PUP2YGR253C TCO89Q08921 799 aa7.87□□□□□ -1.15
PUP2YGR253C NDJ1Q12366 352 aa7.87□□□□□ -1.15
PUP2YGR253C ACC1Q00955 2233 aaKnown RBP7.87□□□□□ -1.15
PUP2YGR253C CHS1P08004 1131 aa7.86□□□□□ -1.15
PUP2YGR253C GAC1P28006 793 aa7.86□□□□□ -1.15
PUP2YGR253C KDX1P36005 433 aa7.86□□□□□ -1.15
PUP2YGR253C SMC3P47037 1230 aa7.86□□□□□ -1.15
PUP2YGR253C NPA3P47122 385 aa7.86□□□□□ -1.15
PUP2YGR253C TIM8P57744 87 aa7.86□□□□□ -1.15
PUP2YGR253C TBF1Q02457 562 aa7.86□□□□□ -1.15
PUP2YGR253C GCN5Q03330 439 aa7.86□□□□□ -1.15
PUP2YGR253C CEF1Q03654 590 aaPredicted RBP7.86□□□□□ -1.15
PUP2YGR253C MLH2Q07980 695 aa7.86□□□□□ -1.15
PUP2YGR253C TLG2Q08144 397 aa7.86□□□□□ -1.15
PUP2YGR253C SAM3Q08986 587 aa7.86□□□□□ -1.15
PUP2YGR253C YPR027CQ12079 277 aa7.86□□□□□ -1.15
PUP2YGR253C MED1Q12321 566 aa7.86□□□□□ -1.15
PUP2YGR253C STB3Q12427 513 aa7.86□□□□□ -1.15
PUP2YGR253C CHS2P14180 963 aa7.85□□□□□ -1.15
PUP2YGR253C RPC31P17890 251 aa7.85□□□□□ -1.15
PUP2YGR253C IME1P21190 360 aa7.85□□□□□ -1.15
PUP2YGR253C FRE1P32791 686 aa7.85□□□□□ -1.15
PUP2YGR253C SPT23P35210 1082 aa7.85□□□□□ -1.15
PUP2YGR253C KAP123P40069 1113 aaKnown RBP7.85□□□□□ -1.15
PUP2YGR253C YNL011CP53980 444 aa7.85□□□□□ -1.15
PUP2YGR253C MUB1Q03162 620 aa7.85□□□□□ -1.15
PUP2YGR253C YPL216WQ08964 1102 aa7.85□□□□□ -1.15
PUP2YGR253C PIN2Q12057 282 aa7.85□□□□□ -1.15
PUP2YGR253C PDC6P26263 563 aaKnown RBP7.84□□□□□ -1.15
PUP2YGR253C GPI10P30777 616 aa7.84□□□□□ -1.15
PUP2YGR253C NUP60P39705 539 aa7.84□□□□□ -1.15
PUP2YGR253C SHQ1P40486 507 aaPredicted RBP7.84□□□□□ -1.15
PUP2YGR253C CEG1Q01159 459 aaPredicted RBP7.84□□□□□ -1.15
PUP2YGR253C RLP24Q07915 199 aaKnown RBP7.84□□□□□ -1.15
PUP2YGR253C ABP140Q08641 628 aaKnown RBP7.84□□□□□ -1.15
PUP2YGR253C GAL10P04397 699 aa7.83□□□□□ -1.16
PUP2YGR253C RRT12P25381 491 aa7.83□□□□□ -1.16
PUP2YGR253C EFB1P32471 206 aaKnown RBP7.83□□□□□ -1.16
PUP2YGR253C SWI3P32591 825 aa7.83□□□□□ -1.16
PUP2YGR253C YKL091CP33324 310 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms