RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W PET309P32522 965 aaPredicted RBP3.56□□□□□ -1.84
SIZ1YDR409W CNS1P33313 385 aa3.56□□□□□ -1.84
SIZ1YDR409W HEL1P36113 551 aa3.56□□□□□ -1.84
SIZ1YDR409W SHM1P37292 490 aaPredicted RBP3.56□□□□□ -1.84
SIZ1YDR409W YHL008CP38750 627 aa3.56□□□□□ -1.84
SIZ1YDR409W SMF1P38925 575 aa3.56□□□□□ -1.84
SIZ1YDR409W OAF1P39720 1047 aaPredicted RBP3.56□□□□□ -1.84
SIZ1YDR409W DPH1P40487 425 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W HXT8P40886 569 aa3.56□□□□□ -1.84
SIZ1YDR409W PXA1P41909 870 aa3.56□□□□□ -1.84
SIZ1YDR409W YJR096WP47137 282 aa3.56□□□□□ -1.84
SIZ1YDR409W CWC24P53769 259 aa3.56□□□□□ -1.84
SIZ1YDR409W ERG5P54781 538 aa3.56□□□□□ -1.84
SIZ1YDR409W YLR225CQ05948 407 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W NOC3Q07896 663 aaPredicted RBP3.56□□□□□ -1.84
SIZ1YDR409W ALE1Q08548 619 aa3.56□□□□□ -1.84
SIZ1YDR409W DCS2Q12123 353 aa3.56□□□□□ -1.84
SIZ1YDR409W TCB1Q12466 1186 aa3.56□□□□□ -1.84
SIZ1YDR409W ISN1Q99312 450 aa3.56□□□□□ -1.84
SIZ1YDR409W RPS21AP0C0V8 87 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W CAF20P12962 161 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W PRE10P21242 288 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
SIZ1YDR409W SPO11P23179 398 aa3.56□□□□□ -1.84
SIZ1YDR409W VMA3P25515 160 aa3.56□□□□□ -1.84
SIZ1YDR409W KIP2P28743 706 aa3.56□□□□□ -1.84
SIZ1YDR409W ZUO1P32527 433 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W VPH1P32563 840 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W SPC29P33419 253 aa3.56□□□□□ -1.84
SIZ1YDR409W CCT3P39077 534 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W SBE2P42223 864 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W EPL1P43572 832 aa3.56□□□□□ -1.84
SIZ1YDR409W GFD1Q04839 188 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W YDR344CQ05510 147 aa3.56□□□□□ -1.84
SIZ1YDR409W FAL1Q12099 399 aaKnown RBP3.56□□□□□ -1.84
SIZ1YDR409W NYV1Q12255 253 aa3.56□□□□□ -1.84
SIZ1YDR409W BI4P03879 638 aa3.55□□□□□ -1.84
SIZ1YDR409W RAD1P06777 1100 aa3.55□□□□□ -1.84
SIZ1YDR409W SRD1P09007 221 aa3.55□□□□□ -1.84
SIZ1YDR409W AAC3P18238 307 aa3.55□□□□□ -1.84
SIZ1YDR409W MCM3P24279 971 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W RPC53P25441 422 aa3.55□□□□□ -1.84
SIZ1YDR409W BMH1P29311 267 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W SEC65P29478 273 aa3.55□□□□□ -1.84
SIZ1YDR409W GUT2P32191 649 aa3.55□□□□□ -1.84
SIZ1YDR409W PDB1P32473 366 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W NIC96P34077 839 aa3.55□□□□□ -1.84
SIZ1YDR409W YET1P35723 206 aa3.55□□□□□ -1.84
SIZ1YDR409W ERT1P38140 529 aa3.55□□□□□ -1.84
SIZ1YDR409W HIS6P40545 261 aa3.55□□□□□ -1.84
SIZ1YDR409W SAP185P40856 1058 aa3.55□□□□□ -1.84
SIZ1YDR409W SUT1P53032 299 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W NGL3Q03210 505 aa3.55□□□□□ -1.84
SIZ1YDR409W MSH6Q03834 1242 aa3.55□□□□□ -1.84
SIZ1YDR409W TDA9Q04545 1251 aa3.55□□□□□ -1.84
SIZ1YDR409W HEL2Q05580 639 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W HCR1Q05775 265 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W PLP2Q12017 286 aa3.55□□□□□ -1.84
SIZ1YDR409W SLM3Q12093 417 aa3.55□□□□□ -1.84
SIZ1YDR409W KRS1P15180 591 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W MSN1P22148 382 aa3.55□□□□□ -1.84
SIZ1YDR409W RAD57P25301 460 aa3.55□□□□□ -1.84
SIZ1YDR409W VMA8P32610 256 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W SLA1P32790 1244 aa3.55□□□□□ -1.84
SIZ1YDR409W SMY2P32909 740 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W MRX1P40050 688 aa3.55□□□□□ -1.84
SIZ1YDR409W DOT6P40059 670 aaKnown RBP3.55□□□□□ -1.84
SIZ1YDR409W RIC1P40395 1056 aa3.55□□□□□ -1.84
SIZ1YDR409W SHQ1P40486 507 aaPredicted RBP3.55□□□□□ -1.84
SIZ1YDR409W VTC2P43585 828 aa3.55□□□□□ -1.84
SIZ1YDR409W TRS85P46944 698 aa3.55□□□□□ -1.84
SIZ1YDR409W PXR1P53335 271 aaPredicted RBP3.55□□□□□ -1.84
SIZ1YDR409W MAK10Q02197 733 aa3.55□□□□□ -1.84
SIZ1YDR409W ECM9Q02202 377 aa3.55□□□□□ -1.84
SIZ1YDR409W YCS4Q06156 1176 aa3.55□□□□□ -1.84
SIZ1YDR409W EAF1Q06337 982 aa3.55□□□□□ -1.84
SIZ1YDR409W MLC2Q06580 163 aa3.55□□□□□ -1.84
SIZ1YDR409W MPC54Q08550 464 aa3.55□□□□□ -1.84
SIZ1YDR409W AFT2Q08957 416 aa3.55□□□□□ -1.84
SIZ1YDR409W RPS31P05759 152 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W RED1P14291 827 aa3.54□□□□□ -1.84
SIZ1YDR409W ATP12P22135 325 aa3.54□□□□□ -1.84
SIZ1YDR409W CDC10P25342 322 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W VBA3P25594 458 aa3.54□□□□□ -1.84
SIZ1YDR409W PAP1P29468 568 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W IRE1P32361 1115 aa3.54□□□□□ -1.84
SIZ1YDR409W TFB1P32776 642 aa3.54□□□□□ -1.84
SIZ1YDR409W SLX5P32828 619 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SIZ1YDR409W DCW1P36091 449 aa3.54□□□□□ -1.84
SIZ1YDR409W PCM1P38628 557 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W TDA3P38758 523 aa3.54□□□□□ -1.84
SIZ1YDR409W GGA2P38817 585 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W CTM1P38818 585 aa3.54□□□□□ -1.84
SIZ1YDR409W ATG3P40344 310 aa3.54□□□□□ -1.84
SIZ1YDR409W NTA1P40354 457 aa3.54□□□□□ -1.84
SIZ1YDR409W MID1P41821 548 aa3.54□□□□□ -1.84
SIZ1YDR409W MRPS18P42847 217 aa3.54□□□□□ -1.84
SIZ1YDR409W DUG1P43616 481 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W CUS1Q02554 436 aaPredicted RBP3.54□□□□□ -1.84
SIZ1YDR409W ECM38Q05902 660 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms