RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	PRP31	P49704	494 aa	Predicted RBP	4.75	□□□□□ -1.65
REF2	YDR195W	SNP1	Q00916	300 aa	Predicted RBP	4.75	□□□□□ -1.65
REF2	YDR195W	CDC9	P04819	755 aa		4.74	□□□□□ -1.65
REF2	YDR195W	BCD1	P38772	366 aa		4.74	□□□□□ -1.65
REF2	YDR195W	RPN10	P38886	268 aa	Known RBP	4.74	□□□□□ -1.65
REF2	YDR195W	UBC11	P52492	156 aa		4.74	□□□□□ -1.65
REF2	YDR195W	YLR149C	Q99296	730 aa		4.74	□□□□□ -1.65
REF2	YDR195W	PHO8	P11491	566 aa		4.73	□□□□□ -1.65
REF2	YDR195W	YFL052W	P43551	465 aa		4.73	□□□□□ -1.65
REF2	YDR195W	TEL2	P53038	688 aa		4.73	□□□□□ -1.65
REF2	YDR195W	MSH2	P25847	964 aa		4.72	□□□□□ -1.65
REF2	YDR195W	HIS7	P33734	552 aa	Known RBP	4.72	□□□□□ -1.65
REF2	YDR195W	APL2	P36000	726 aa	Predicted RBP	4.72	□□□□□ -1.65
REF2	YDR195W	MIP6	P38760	659 aa	Known RBP	4.72	□□□□□ -1.65
REF2	YDR195W	PCL5	P38794	229 aa		4.72	□□□□□ -1.65
REF2	YDR195W	YAP1802	P53309	568 aa		4.72	□□□□□ -1.65
REF2	YDR195W	ORC4	P54791	529 aa		4.72	□□□□□ -1.65
REF2	YDR195W	MRH1	Q12117	320 aa	Predicted RBP	4.72	□□□□□ -1.65
REF2	YDR195W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
REF2	YDR195W	ADE2	P21264	571 aa	Known RBP	4.72	□□□□□ -1.65
REF2	YDR195W	CCT3	P39077	534 aa	Known RBP	4.72	□□□□□ -1.65
REF2	YDR195W	NPY1	P53164	384 aa		4.72	□□□□□ -1.65
REF2	YDR195W	ARG5,6	Q01217	863 aa		4.72	□□□□□ -1.65
REF2	YDR195W	UGO1	Q03327	502 aa		4.72	□□□□□ -1.65
REF2	YDR195W	MCM21	Q06675	368 aa		4.72	□□□□□ -1.65
REF2	YDR195W	SIR3	P06701	978 aa		4.71	□□□□□ -1.66
REF2	YDR195W	MEF1	P25039	761 aa		4.71	□□□□□ -1.66
REF2	YDR195W	VBA3	P25594	458 aa		4.71	□□□□□ -1.66
REF2	YDR195W	HIR1	P32479	840 aa		4.71	□□□□□ -1.66
REF2	YDR195W	SSL2	Q00578	843 aa		4.71	□□□□□ -1.66
REF2	YDR195W	TRZ1	P36159	838 aa	Predicted RBP	4.7	□□□□□ -1.66
REF2	YDR195W	APT2	P36973	181 aa		4.7	□□□□□ -1.66
REF2	YDR195W	YHR112C	P38716	378 aa		4.7	□□□□□ -1.66
REF2	YDR195W	REV7	P38927	245 aa		4.7	□□□□□ -1.66
REF2	YDR195W	DSS1	P39112	969 aa		4.7	□□□□□ -1.66
REF2	YDR195W	OSW7	P43611	510 aa		4.7	□□□□□ -1.66
REF2	YDR195W	CTK1	Q03957	528 aa	Known RBP	4.7	□□□□□ -1.66
REF2	YDR195W	SRD1	P09007	221 aa		4.69	□□□□□ -1.66
REF2	YDR195W	MIH1	P23748	554 aa		4.69	□□□□□ -1.66
REF2	YDR195W	HOG1	P32485	435 aa		4.69	□□□□□ -1.66
REF2	YDR195W	HSL7	P38274	827 aa		4.69	□□□□□ -1.66
REF2	YDR195W	NHX1	Q04121	633 aa		4.69	□□□□□ -1.66
REF2	YDR195W	COG8	Q04632	607 aa		4.69	□□□□□ -1.66
REF2	YDR195W	CIT2	P08679	460 aa		4.68	□□□□□ -1.66
REF2	YDR195W	GFA1	P14742	717 aa	Known RBP	4.68	□□□□□ -1.66
REF2	YDR195W	CDC43	P18898	376 aa		4.68	□□□□□ -1.66
REF2	YDR195W	THI4	P32318	326 aa		4.68	□□□□□ -1.66
REF2	YDR195W	PEX6	P33760	1030 aa		4.68	□□□□□ -1.66
REF2	YDR195W	YKR018C	P36114	725 aa		4.68	□□□□□ -1.66
REF2	YDR195W	LYS9	P38999	446 aa		4.68	□□□□□ -1.66
REF2	YDR195W	MTL1	P53214	551 aa		4.68	□□□□□ -1.66
REF2	YDR195W	SMX3	P54999	86 aa	Predicted RBP	4.68	□□□□□ -1.66
REF2	YDR195W	RPN7	Q06103	429 aa	Known RBP	4.68	□□□□□ -1.66
REF2	YDR195W	Q0142	Q9ZZW4	58 aa		4.68	□□□□□ -1.66
REF2	YDR195W	YEL1	P34225	687 aa		4.68	□□□□□ -1.66
REF2	YDR195W	YKR051W	P36142	418 aa		4.68	□□□□□ -1.66
REF2	YDR195W	YKL033W-A	Q86ZR7	236 aa		4.68	□□□□□ -1.66
REF2	YDR195W	YTA7	P40340	1379 aa		4.67	□□□□□ -1.66
REF2	YDR195W	CBR1	P38626	284 aa	Known RBP	4.67	□□□□□ -1.66
REF2	YDR195W	FMO1	P38866	432 aa		4.67	□□□□□ -1.66
REF2	YDR195W	NUP60	P39705	539 aa		4.67	□□□□□ -1.66
REF2	YDR195W	GID8	P40208	455 aa		4.67	□□□□□ -1.66
REF2	YDR195W	ATF1	P40353	525 aa		4.67	□□□□□ -1.66
REF2	YDR195W	PCL10	P53124	433 aa		4.67	□□□□□ -1.66
REF2	YDR195W	REC102	Q02721	264 aa		4.67	□□□□□ -1.66
REF2	YDR195W	HMO1	Q03973	246 aa	Known RBP	4.67	□□□□□ -1.66
REF2	YDR195W	POB3	Q04636	552 aa	Known RBP	4.67	□□□□□ -1.66
REF2	YDR195W	PYC1	P11154	1178 aa	Known RBP	4.66	□□□□□ -1.66
REF2	YDR195W	KIN3	P22209	435 aa		4.66	□□□□□ -1.66
REF2	YDR195W	VPS73	P53142	486 aa	Known RBP	4.66	□□□□□ -1.66
REF2	YDR195W	YML122C	Q03207	126 aa		4.66	□□□□□ -1.66
REF2	YDR195W	FPR4	Q06205	392 aa	Predicted RBP	4.66	□□□□□ -1.66
REF2	YDR195W	HRP1	Q99383	534 aa	Known RBP	4.66	□□□□□ -1.66
REF2	YDR195W	HCA4	P20448	770 aa	Known RBP	4.65	□□□□□ -1.66
REF2	YDR195W	TDP1	P38319	544 aa		4.65	□□□□□ -1.66
REF2	YDR195W	PAN2	P53010	1115 aa	Predicted RBP	4.65	□□□□□ -1.66
REF2	YDR195W	SUT2	Q12286	268 aa		4.65	□□□□□ -1.66
REF2	YDR195W	TAF3	Q12297	353 aa		4.65	□□□□□ -1.66
REF2	YDR195W	DMC1	P25453	334 aa		4.64	□□□□□ -1.67
REF2	YDR195W	MVD1	P32377	396 aa	Known RBP	4.64	□□□□□ -1.67
REF2	YDR195W	NDC80	P40460	691 aa		4.64	□□□□□ -1.67
REF2	YDR195W	TAH11	P47112	604 aa		4.64	□□□□□ -1.67
REF2	YDR195W	CLF1	Q12309	687 aa	Predicted RBP	4.64	□□□□□ -1.67
REF2	YDR195W	ERG6	P25087	383 aa	Known RBP	4.64	□□□□□ -1.67
REF2	YDR195W	PCL2	P25693	308 aa		4.64	□□□□□ -1.67
REF2	YDR195W	CUE2	P36075	443 aa	Known RBP	4.64	□□□□□ -1.67
REF2	YDR195W	SFB3	P38810	929 aa		4.64	□□□□□ -1.67
REF2	YDR195W	FHN1	P53279	174 aa		4.64	□□□□□ -1.67
REF2	YDR195W	NTG2	Q08214	380 aa		4.64	□□□□□ -1.67
REF2	YDR195W	RAD18	P10862	487 aa		4.63	□□□□□ -1.67
REF2	YDR195W	RNR1	P21524	888 aa	Known RBP	4.63	□□□□□ -1.67
REF2	YDR195W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
REF2	YDR195W	YJL206C	P39529	758 aa		4.63	□□□□□ -1.67
REF2	YDR195W	DOT6	P40059	670 aa	Known RBP	4.63	□□□□□ -1.67
REF2	YDR195W	ARG2	P40360	574 aa		4.63	□□□□□ -1.67
REF2	YDR195W	UBC9	P50623	157 aa	Predicted RBP	4.63	□□□□□ -1.67
REF2	YDR195W	ORC1	P54784	914 aa	Predicted RBP	4.63	□□□□□ -1.67
REF2	YDR195W	ARP4	P80428	489 aa		4.63	□□□□□ -1.67
REF2	YDR195W	ATG33	Q06485	197 aa		4.63	□□□□□ -1.67
REF2	YDR195W	PEX1	P24004	1043 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms