RNA–Protein interactions for RNA: YDR105C

TMS1, Transcript of Vacuolar membrane protein of unknown function, yeastyeast

Gene TMS1, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMS1YDR105C SFH1Q06168 426 aa8.56□□□□□ -1.04
TMS1YDR105C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
TMS1YDR105C ABP140Q08641 628 aaKnown RBP8.56□□□□□ -1.04
TMS1YDR105C MET7Q08645 548 aa8.56□□□□□ -1.04
TMS1YDR105C SPO16P17122 198 aa8.55□□□□□ -1.04
TMS1YDR105C PRP9P19736 530 aaKnown RBP8.55□□□□□ -1.04
TMS1YDR105C RRT12P25381 491 aa8.55□□□□□ -1.04
TMS1YDR105C MSH1P25846 959 aa8.55□□□□□ -1.04
TMS1YDR105C SEG2P34250 1132 aa8.55□□□□□ -1.04
TMS1YDR105C CBR1P38626 284 aaKnown RBP8.55□□□□□ -1.04
TMS1YDR105C DYS1P38791 387 aa8.55□□□□□ -1.04
TMS1YDR105C YJR039WP47107 1121 aa8.55□□□□□ -1.04
TMS1YDR105C YJR079WP47126 109 aa8.55□□□□□ -1.04
TMS1YDR105C YMR187CQ03236 431 aa8.55□□□□□ -1.04
TMS1YDR105C PPM1Q04081 328 aa8.55□□□□□ -1.04
TMS1YDR105C TDA9Q04545 1251 aa8.55□□□□□ -1.04
TMS1YDR105C YDR222WQ04925 415 aa8.55□□□□□ -1.04
TMS1YDR105C ECM3Q99252 613 aa8.55□□□□□ -1.04
TMS1YDR105C AI5_BETAQ9ZZX0 354 aa8.55□□□□□ -1.04
TMS1YDR105C RPS3P05750 240 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C HVG1P0CE11 249 aa8.54□□□□□ -1.04
TMS1YDR105C CDC42P19073 191 aa8.54□□□□□ -1.04
TMS1YDR105C COX11P19516 300 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C RNR1P21524 888 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C SSA4P22202 642 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C KIN82P25341 720 aa8.54□□□□□ -1.04
TMS1YDR105C SPT5P27692 1063 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C YBL055CP34220 418 aaPredicted RBP8.54□□□□□ -1.04
TMS1YDR105C RPC37P36121 282 aa8.54□□□□□ -1.04
TMS1YDR105C FLR1P38124 548 aa8.54□□□□□ -1.04
TMS1YDR105C RSC30P38781 883 aa8.54□□□□□ -1.04
TMS1YDR105C CCT2P39076 527 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C ECM7Q06200 448 aa8.54□□□□□ -1.04
TMS1YDR105C YOR223WQ12015 292 aa8.54□□□□□ -1.04
TMS1YDR105C GIS3Q12418 502 aa8.54□□□□□ -1.04
TMS1YDR105C MOT1P32333 1867 aa8.54□□□□□ -1.04
TMS1YDR105C ARG4P04076 463 aaPredicted RBP8.54□□□□□ -1.04
TMS1YDR105C WHI2P12611 486 aa8.54□□□□□ -1.04
TMS1YDR105C PMS1P14242 873 aa8.54□□□□□ -1.04
TMS1YDR105C RME1P32338 300 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C GCD6P32501 712 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C TIM23P32897 222 aa8.54□□□□□ -1.04
TMS1YDR105C TRM2P33753 639 aa8.54□□□□□ -1.04
TMS1YDR105C GPT2P36148 743 aa8.54□□□□□ -1.04
TMS1YDR105C APE3P37302 537 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C CCL1P37366 393 aa8.54□□□□□ -1.04
TMS1YDR105C END3P39013 349 aa8.54□□□□□ -1.04
TMS1YDR105C INA22P40576 216 aa8.54□□□□□ -1.04
TMS1YDR105C PHO86P46956 311 aa8.54□□□□□ -1.04
TMS1YDR105C JJJ3P47138 172 aa8.54□□□□□ -1.04
TMS1YDR105C MNP1P53163 194 aaPredicted RBP8.54□□□□□ -1.04
TMS1YDR105C CPR6P53691 371 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C MTG1Q03151 367 aaPredicted RBP8.54□□□□□ -1.04
TMS1YDR105C CWC21Q03375 135 aaKnown RBP8.54□□□□□ -1.04
TMS1YDR105C UFO1Q04511 668 aa8.54□□□□□ -1.04
TMS1YDR105C CST9Q06032 482 aa8.54□□□□□ -1.04
TMS1YDR105C YLR455WQ06188 304 aa8.54□□□□□ -1.04
TMS1YDR105C ZPS1Q12512 249 aa8.54□□□□□ -1.04
TMS1YDR105C SEY1Q99287 776 aa8.54□□□□□ -1.04
TMS1YDR105C ASP3-2P0CX77 362 aa8.53□□□□□ -1.04
TMS1YDR105C ASP3-3P0CX78 362 aa8.53□□□□□ -1.04
TMS1YDR105C ASP3-4P0CX79 362 aa8.53□□□□□ -1.04
TMS1YDR105C ASP3-1P0CZ17 362 aa8.53□□□□□ -1.04
TMS1YDR105C YER152CP10356 443 aa8.53□□□□□ -1.04
TMS1YDR105C RPL4AP10664 362 aaKnown RBP8.53□□□□□ -1.04
TMS1YDR105C POX1P13711 748 aa8.53□□□□□ -1.04
TMS1YDR105C KAR3P17119 729 aa8.53□□□□□ -1.04
TMS1YDR105C PLC1P32383 869 aa8.53□□□□□ -1.04
TMS1YDR105C TMT1P32643 299 aa8.53□□□□□ -1.04
TMS1YDR105C PBP2P38151 413 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
TMS1YDR105C NMD5P46970 1048 aa8.53□□□□□ -1.04
TMS1YDR105C DAS1P47005 663 aa8.53□□□□□ -1.04
TMS1YDR105C RPL4BP49626 362 aaKnown RBP8.53□□□□□ -1.04
TMS1YDR105C INP52P50942 1183 aa8.53□□□□□ -1.04
TMS1YDR105C YGL140CP53120 1219 aa8.53□□□□□ -1.04
TMS1YDR105C NOG2P53742 486 aaKnown RBP8.53□□□□□ -1.04
TMS1YDR105C ERV41Q04651 352 aa8.53□□□□□ -1.04
TMS1YDR105C YDR278CQ05612 105 aa8.53□□□□□ -1.04
TMS1YDR105C YOR059CQ08448 450 aaKnown RBP8.53□□□□□ -1.04
TMS1YDR105C POL3P15436 1097 aa8.52□□□□□ -1.05
TMS1YDR105C EFB1P32471 206 aaKnown RBP8.52□□□□□ -1.05
TMS1YDR105C MSG5P38590 489 aa8.52□□□□□ -1.05
TMS1YDR105C SAP185P40856 1058 aa8.52□□□□□ -1.05
TMS1YDR105C PXA1P41909 870 aa8.52□□□□□ -1.05
TMS1YDR105C SCS3P53012 380 aa8.52□□□□□ -1.05
TMS1YDR105C IVY1Q04934 453 aa8.52□□□□□ -1.05
TMS1YDR105C PNP1Q05788 311 aa8.52□□□□□ -1.05
TMS1YDR105C JIP3O13555 125 aa8.51□□□□□ -1.05
TMS1YDR105C GAL10P04397 699 aa8.51□□□□□ -1.05
TMS1YDR105C ADH4P10127 382 aa8.51□□□□□ -1.05
TMS1YDR105C ABD1P32783 436 aaPredicted RBP8.51□□□□□ -1.05
TMS1YDR105C VHC1P38329 1120 aa8.51□□□□□ -1.05
TMS1YDR105C MMS21P38632 267 aa8.51□□□□□ -1.05
TMS1YDR105C KSP1P38691 1029 aaKnown RBP8.51□□□□□ -1.05
TMS1YDR105C APM2P38700 605 aa8.51□□□□□ -1.05
TMS1YDR105C SSP1P38871 571 aa8.51□□□□□ -1.05
TMS1YDR105C PMC1P38929 1173 aaPredicted RBP8.51□□□□□ -1.05
TMS1YDR105C MXR1P40029 184 aa8.51□□□□□ -1.05
TMS1YDR105C AIM21P40563 679 aa8.51□□□□□ -1.05
TMS1YDR105C YML6P51998 286 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms