RNA–Protein interactions for RNA: YDL143W

CCT4, Transcript of Subunit of the cytosolic chaperonin Cct ring complex, yeast

Gene CCT4, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCT4	YDL143W	STB4	P50104	949 aa		11.53	□□□□□ -0.56
CCT4	YDL143W	ALT1	P52893	592 aa		11.53	□□□□□ -0.56
CCT4	YDL143W	ECM3	Q99252	613 aa		11.53	□□□□□ -0.56
CCT4	YDL143W	MAC1	P35192	417 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	HEL1	P36113	551 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	EXO5	P38289	585 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	SLX1	P38324	304 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	CCC2	P38995	1004 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	YMR124W	P39523	943 aa	Known RBP	11.52	□□□□□ -0.57
CCT4	YDL143W	EEB1	Q02891	456 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	SKY1	Q03656	742 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	YLR455W	Q06188	304 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	ESC2	Q06340	456 aa		11.52	□□□□□ -0.57
CCT4	YDL143W	RNR1	P21524	888 aa	Known RBP	11.51	□□□□□ -0.57
CCT4	YDL143W	STO1	P34160	861 aa	Known RBP	11.51	□□□□□ -0.57
CCT4	YDL143W	SEC9	P40357	651 aa		11.51	□□□□□ -0.57
CCT4	YDL143W	STU2	P46675	888 aa		11.51	□□□□□ -0.57
CCT4	YDL143W	RAD57	P25301	460 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	CYS3	P31373	394 aa	Known RBP	11.5	□□□□□ -0.57
CCT4	YDL143W	DYS1	P38791	387 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	CAJ1	P39101	391 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	EFB1	P32471	206 aa	Known RBP	11.5	□□□□□ -0.57
CCT4	YDL143W	TBS1	P38114	1094 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	EFM4	P40516	257 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	APT1	P49435	187 aa	Known RBP	11.5	□□□□□ -0.57
CCT4	YDL143W	ESC8	Q08119	714 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	YPR027C	Q12079	277 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	DAS2	Q12084	232 aa		11.5	□□□□□ -0.57
CCT4	YDL143W	SEC21	P32074	935 aa	Known RBP	11.49	□□□□□ -0.57
CCT4	YDL143W	BIO2	P32451	375 aa		11.49	□□□□□ -0.57
CCT4	YDL143W	YKL050C	P35736	922 aa		11.49	□□□□□ -0.57
CCT4	YDL143W	MRPL7	P36519	292 aa		11.49	□□□□□ -0.57
CCT4	YDL143W	MCX1	P38323	520 aa	Predicted RBP	11.49	□□□□□ -0.57
CCT4	YDL143W	SET5	P38890	526 aa	Known RBP	11.49	□□□□□ -0.57
CCT4	YDL143W	ZAP1	P47043	880 aa		11.49	□□□□□ -0.57
CCT4	YDL143W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.49	□□□□□ -0.57	not detected
CCT4	YDL143W	RCR2	Q03446	210 aa	Known RBP	11.49	□□□□□ -0.57
CCT4	YDL143W	SOV1	Q04748	898 aa		11.49	□□□□□ -0.57
CCT4	YDL143W	REC8	Q12188	680 aa		11.49	□□□□□ -0.57
CCT4	YDL143W	PKH2	Q12236	1081 aa	Known RBP	11.49	□□□□□ -0.57
CCT4	YDL143W	RPS3	P05750	240 aa	Known RBP	11.48	□□□□□ -0.57
CCT4	YDL143W	HIP1	P06775	603 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	CHS1	P08004	1131 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	MSD1	P15179	658 aa	Known RBP	11.48	□□□□□ -0.57
CCT4	YDL143W	PET123	P17558	318 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	BUD16	P39988	312 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	YTA12	P40341	825 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	OPT1	P40897	799 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	PHO86	P46956	311 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	YGR021W	P53212	290 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	YLR001C	Q07895	862 aa		11.48	□□□□□ -0.57
CCT4	YDL143W	VPS3	P23643	1011 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	HXT1	P32465	570 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	AGP2	P38090	596 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	GEM1	P39722	662 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	JHD1	P40034	492 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	STP1	Q00947	519 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	SYH1	Q02875	849 aa	Known RBP	11.47	□□□□□ -0.57
CCT4	YDL143W	TIF35	Q04067	274 aa	Known RBP	11.47	□□□□□ -0.57
CCT4	YDL143W	SIL1	Q08199	421 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	UBR2	Q07963	1872 aa		11.47	□□□□□ -0.57
CCT4	YDL143W	CIT2	P08679	460 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	YER152C	P10356	443 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	TCD1	P38756	429 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	YHR202W	P38887	602 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	XDJ1	P39102	459 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	POL31	P46957	487 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	SDH5	Q08230	162 aa		11.46	□□□□□ -0.57
CCT4	YDL143W	ADK2	P26364	225 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	SRB4	P32569	687 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	RRN6	P32786	894 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	YJR054W	P47114	497 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	YGL036W	P53185	909 aa	Predicted RBP	11.45	□□□□□ -0.58
CCT4	YDL143W	GPD1	Q00055	391 aa	Known RBP	11.45	□□□□□ -0.58
CCT4	YDL143W	MZM1	Q03429	123 aa	Predicted RBP	11.45	□□□□□ -0.58
CCT4	YDL143W	YMR018W	Q04364	514 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	HAP2	P06774	265 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	VMA4	P22203	233 aa	Known RBP	11.45	□□□□□ -0.58
CCT4	YDL143W	CCL1	P37366	393 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	NOP4	P37838	685 aa	Known RBP	11.45	□□□□□ -0.58
CCT4	YDL143W	APN2	P38207	520 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	MSC7	P38694	644 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	PSY2	P40164	858 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	RSC8	P43609	557 aa	Known RBP	11.45	□□□□□ -0.58
CCT4	YDL143W	SPC98	P53540	846 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	VAC14	Q06708	880 aa		11.45	□□□□□ -0.58
CCT4	YDL143W	TAO3	P40468	2376 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	GAL80	P04387	435 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	ERG11	P10614	530 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	VBA3	P25594	458 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	GYP6	P32806	458 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	KDX1	P36005	433 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	VBA5	P36172	582 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	SIP5	P40210	489 aa	Known RBP	11.44	□□□□□ -0.58
CCT4	YDL143W	MND1	P53102	219 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	JJJ1	P53863	590 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	BOP3	P53958	396 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	YDR222W	Q04925	415 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	SML1	Q04964	104 aa		11.44	□□□□□ -0.58
CCT4	YDL143W	CKI1	P20485	582 aa		11.43	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms