RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	ORC4	P54791	529 aa		7.2	□□□□□ -1.26
SIR2	YDL042C	PRP4	P20053	465 aa	Known RBP	7.19	□□□□□ -1.26
SIR2	YDL042C	LST4	P34239	828 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	MAL31	P38156	614 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	YBP2	P53169	641 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	ARP4	P80428	489 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	ECM9	Q02202	377 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	SLU7	Q02775	382 aa	Known RBP	7.19	□□□□□ -1.26
SIR2	YDL042C	DCS2	Q12123	353 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
SIR2	YDL042C	KAR4	P25583	335 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	DID4	P36108	232 aa		7.19	□□□□□ -1.26
SIR2	YDL042C	CAD1	P24813	409 aa	Known RBP	7.18	□□□□□ -1.26
SIR2	YDL042C	SSZ1	P38788	538 aa	Known RBP	7.18	□□□□□ -1.26
SIR2	YDL042C	DUG1	P43616	481 aa	Known RBP	7.18	□□□□□ -1.26
SIR2	YDL042C	TMA10	Q06177	86 aa		7.18	□□□□□ -1.26
SIR2	YDL042C	YLR358C	O13565	187 aa		7.17	□□□□□ -1.26
SIR2	YDL042C	BFA1	P47113	574 aa		7.17	□□□□□ -1.26
SIR2	YDL042C	COG6	P53959	839 aa		7.17	□□□□□ -1.26
SIR2	YDL042C	YLR415C	O13578	112 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	ELM1	P32801	640 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	GRX7	P38068	203 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	RPP1	P38786	293 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	YJR039W	P47107	1121 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	EXG2	P52911	562 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	GPD1	Q00055	391 aa	Known RBP	7.16	□□□□□ -1.26
SIR2	YDL042C	TRM11	Q12463	433 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	THI80	P35202	319 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	HXT6	P39003	570 aa	Known RBP	7.16	□□□□□ -1.26
SIR2	YDL042C	HXT7	P39004	570 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	PRP31	P49704	494 aa	Predicted RBP	7.16	□□□□□ -1.26
SIR2	YDL042C	BRE5	P53741	515 aa	Known RBP	7.16	□□□□□ -1.26
SIR2	YDL042C	RGA2	Q06407	1009 aa		7.16	□□□□□ -1.26
SIR2	YDL042C	CTF13	P35203	478 aa		7.15	□□□□□ -1.27
SIR2	YDL042C	YJR008W	P47085	338 aa		7.15	□□□□□ -1.27
SIR2	YDL042C	PEX14	P53112	341 aa		7.15	□□□□□ -1.27
SIR2	YDL042C	LEE1	Q02799	301 aa	Known RBP	7.15	□□□□□ -1.27
SIR2	YDL042C	AEP2	P22136	580 aa		7.14	□□□□□ -1.27
SIR2	YDL042C	STE11	P23561	717 aa		7.14	□□□□□ -1.27
SIR2	YDL042C	YKR075C	P36155	307 aa		7.14	□□□□□ -1.27
SIR2	YDL042C	YHM2	Q04013	314 aa		7.14	□□□□□ -1.27
SIR2	YDL042C	RMP1	Q12530	201 aa		7.14	□□□□□ -1.27
SIR2	YDL042C	RPS21B	Q3E754	87 aa	Known RBP	7.14	□□□□□ -1.27
SIR2	YDL042C	YBR259W	P38338	688 aa		7.13	□□□□□ -1.27
SIR2	YDL042C	SIC1	P38634	284 aa		7.13	□□□□□ -1.27
SIR2	YDL042C	GPP2	P40106	250 aa	Known RBP	7.13	□□□□□ -1.27
SIR2	YDL042C	MCM6	P53091	1017 aa	Known RBP	7.13	□□□□□ -1.27
SIR2	YDL042C	PTA1	Q01329	785 aa	Predicted RBP	7.13	□□□□□ -1.27
SIR2	YDL042C	DAL3	P32459	195 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	ENP1	P38333	483 aa	Known RBP	7.12	□□□□□ -1.27
SIR2	YDL042C	SET2	P46995	733 aa	Known RBP	7.12	□□□□□ -1.27
SIR2	YDL042C	MNN10	P50108	393 aa	Known RBP	7.12	□□□□□ -1.27
SIR2	YDL042C	ENB1	Q08299	606 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	RPS21A	P0C0V8	87 aa	Known RBP	7.12	□□□□□ -1.27
SIR2	YDL042C	SEC65	P29478	273 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	AKL1	P38080	1108 aa	Known RBP	7.12	□□□□□ -1.27
SIR2	YDL042C	KOG1	P38873	1557 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	YHR202W	P38887	602 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	NUG1	P40010	520 aa	Known RBP	7.12	□□□□□ -1.27
SIR2	YDL042C	NIT2	P47016	307 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	PEX8	P53248	589 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	HFI1	Q12060	488 aa		7.12	□□□□□ -1.27
SIR2	YDL042C	ADE2	P21264	571 aa	Known RBP	7.11	□□□□□ -1.27
SIR2	YDL042C	OAF3	P36023	863 aa		7.11	□□□□□ -1.27
SIR2	YDL042C	APN2	P38207	520 aa		7.11	□□□□□ -1.27
SIR2	YDL042C	MRPS35	P53292	345 aa		7.11	□□□□□ -1.27
SIR2	YDL042C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	7.11	□□□□□ -1.27	not detected
SIR2	YDL042C	ARG5,6	Q01217	863 aa		7.11	□□□□□ -1.27
SIR2	YDL042C	NRG1	Q03125	231 aa		7.11	□□□□□ -1.27
SIR2	YDL042C	PLC1	P32383	869 aa		7.1	□□□□□ -1.27
SIR2	YDL042C	TFC4	P33339	1025 aa		7.1	□□□□□ -1.27
SIR2	YDL042C	BEM4	P39011	633 aa		7.1	□□□□□ -1.27
SIR2	YDL042C	LAS17	Q12446	633 aa		7.1	□□□□□ -1.27
SIR2	YDL042C	APM4	Q99186	491 aa		7.1	□□□□□ -1.27
SIR2	YDL042C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	7.09	□□□□□ -1.27	not detected
SIR2	YDL042C	HSL1	P34244	1518 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	SWI6	P09959	803 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	PFK1	P16861	987 aa	Known RBP	7.09	□□□□□ -1.27
SIR2	YDL042C	APL2	P36000	726 aa	Predicted RBP	7.09	□□□□□ -1.27
SIR2	YDL042C	APT2	P36973	181 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	ECM1	P39715	212 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	GID8	P40208	455 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	YLR407W	Q06070	228 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	YOL057W	Q08225	711 aa		7.09	□□□□□ -1.27
SIR2	YDL042C	DCG1	P32460	244 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	BIT2	P38346	545 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	FKH2	P41813	862 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	ERG5	P54781	538 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	REC102	Q02721	264 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	YMR210W	Q03649	449 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	SKY1	Q03656	742 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	CLU1	Q03690	1277 aa	Known RBP	7.08	□□□□□ -1.28
SIR2	YDL042C	SND1	Q04007	877 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	ISA1	Q07821	250 aa	Predicted RBP	7.08	□□□□□ -1.28
SIR2	YDL042C	TGL5	Q12043	749 aa		7.08	□□□□□ -1.28
SIR2	YDL042C	TMA7	Q3E764	64 aa	Known RBP	7.08	□□□□□ -1.28
SIR2	YDL042C	FAT1	P38225	669 aa		7.07	□□□□□ -1.28
SIR2	YDL042C	YHR112C	P38716	378 aa		7.07	□□□□□ -1.28
SIR2	YDL042C	MCM21	Q06675	368 aa		7.07	□□□□□ -1.28
SIR2	YDL042C	YPR027C	Q12079	277 aa		7.07	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 264.3 ms